RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 TRGV11A0A075B6L2 103 aa10.2□□□□□ -0.78
NPHP4-207ENST00000470763 IGHV3-11P01762 117 aa10.2□□□□□ -0.78
NPHP4-207ENST00000470763 COX6CP09669 75 aa10.2□□□□□ -0.78
NPHP4-207ENST00000470763 LINC01587Q99440 93 aa10.2□□□□□ -0.78
NPHP4-207ENST00000470763 TIMM21Q9BVV7 248 aa10.2□□□□□ -0.78
NPHP4-207ENST00000470763 APCP25054 2843 aa10.2□□□□□ -0.78
NPHP4-207ENST00000470763 IGLV4-3A0A075B6K6 122 aa10.2□□□□□ -0.78
NPHP4-207ENST00000470763 H3BT86 120 aa10.2□□□□□ -0.78
NPHP4-207ENST00000470763 SAA4P35542 130 aa10.2□□□□□ -0.78
NPHP4-207ENST00000470763 LINC01600Q96MT4 127 aa10.2□□□□□ -0.78
NPHP4-207ENST00000470763 VPREB3Q9UKI3 123 aa10.2□□□□□ -0.78
NPHP4-207ENST00000470763 CEMP1Q6PRD7 247 aaPredicted RBP10.19□□□□□ -0.78
NPHP4-207ENST00000470763 I3L3M4 83 aa10.19□□□□□ -0.78
NPHP4-207ENST00000470763 DAND5Q8N907 189 aa10.19□□□□□ -0.78
NPHP4-207ENST00000470763 ABCA12Q86UK0 2595 aa10.18□□□□□ -0.78
NPHP4-207ENST00000470763 M0QY20 66 aa10.18□□□□□ -0.78
NPHP4-207ENST00000470763 C20orf203Q8NBC4 194 aa10.18□□□□□ -0.78
NPHP4-207ENST00000470763 IGKV3-20P01619 116 aa10.18□□□□□ -0.78
NPHP4-207ENST00000470763 NSUN5P1Q3KNT7 163 aa10.18□□□□□ -0.78
NPHP4-207ENST00000470763 A0A0J9YX75 114 aa10.18□□□□□ -0.78
NPHP4-207ENST00000470763 APRG1Q8IVJ8 170 aa10.18□□□□□ -0.78
NPHP4-207ENST00000470763 NDUFA12Q9UI09 145 aa10.18□□□□□ -0.78
NPHP4-207ENST00000470763 TRAV12-2A0A075B6T6 113 aa10.17□□□□□ -0.78
NPHP4-207ENST00000470763 TRBV6-5A0A0K0K1A5 114 aa10.17□□□□□ -0.78
NPHP4-207ENST00000470763 LST1O00453 97 aa10.17□□□□□ -0.78
NPHP4-207ENST00000470763 EDN2P20800 178 aa10.17□□□□□ -0.78
NPHP4-207ENST00000470763 TRAV41A0A0B4J266 112 aa10.17□□□□□ -0.78
NPHP4-207ENST00000470763 MRPL23Q16540 153 aaKnown RBP10.17□□□□□ -0.78
NPHP4-207ENST00000470763 KLK9Q2XQG4 91 aa10.17□□□□□ -0.78
NPHP4-207ENST00000470763 SIRPDQ9H106 197 aa10.17□□□□□ -0.78
NPHP4-207ENST00000470763 KLK9Q9UKQ9 250 aa10.17□□□□□ -0.78
NPHP4-207ENST00000470763 CD28P10747 220 aa10.16□□□□□ -0.78
NPHP4-207ENST00000470763 YAE1D1Q9NRH1 226 aa10.16□□□□□ -0.78
NPHP4-207ENST00000470763 TRBV7-7A0A0K0K1E9 115 aa10.16□□□□□ -0.78
NPHP4-207ENST00000470763 RHOHQ15669 191 aa10.16□□□□□ -0.78
NPHP4-207ENST00000470763 TMEM101Q96IK0 257 aa10.16□□□□□ -0.78
NPHP4-207ENST00000470763 FAM240AA0A1B0GVK7 77 aa10.16□□□□□ -0.78
NPHP4-207ENST00000470763 KLLNB2CW77 178 aa10.16□□□□□ -0.78
NPHP4-207ENST00000470763 C5orf56Q8N8D9 126 aa10.16□□□□□ -0.78
NPHP4-207ENST00000470763 DUX5Q96PT3 197 aa10.16□□□□□ -0.78
NPHP4-207ENST00000470763 IGHV3OR16-10A0A075B7F0 116 aa10.15□□□□□ -0.78
NPHP4-207ENST00000470763 RHPN1-AS1Q9BWJ2 59 aa10.15□□□□□ -0.78
NPHP4-207ENST00000470763 MAP1AP78559 2803 aaPredicted RBP10.14□□□□□ -0.79
NPHP4-207ENST00000470763 LINC00694P0DN24 101 aa10.14□□□□□ -0.79
NPHP4-207ENST00000470763 MIAQ16674 131 aa10.14□□□□□ -0.79
NPHP4-207ENST00000470763 TMEM61Q8N0U2 210 aa10.14□□□□□ -0.79
NPHP4-207ENST00000470763 TMEM126AQ9H061 195 aa10.14□□□□□ -0.79
NPHP4-207ENST00000470763 SPANXA1Q9NS26 97 aa10.14□□□□□ -0.79
NPHP4-207ENST00000470763 NDUFA4O00483 81 aa10.14□□□□□ -0.79
NPHP4-207ENST00000470763 CCL21O00585 134 aa10.14□□□□□ -0.79
NPHP4-207ENST00000470763 IGHV3-73A0A0B4J1V6 119 aa10.14□□□□□ -0.79
NPHP4-207ENST00000470763 SMCR5Q8TEV8 140 aa10.14□□□□□ -0.79
NPHP4-207ENST00000470763 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.13□□□□□ -0.796e-8■■□□□ 12.2
NPHP4-207ENST00000470763 CDSNQ15517 529 aa10.13□□□□□ -0.79
NPHP4-207ENST00000470763 C9orf153Q5TBE3 101 aa10.13□□□□□ -0.79
NPHP4-207ENST00000470763 IGHV3-16A0A0C4DH30 117 aa10.13□□□□□ -0.79
NPHP4-207ENST00000470763 ADORA2A-AS1P86434 159 aa10.13□□□□□ -0.79
NPHP4-207ENST00000470763 DEFB121Q5J5C9 76 aa10.13□□□□□ -0.79
NPHP4-207ENST00000470763 SPANXDQ9BXN6 97 aa10.13□□□□□ -0.79
NPHP4-207ENST00000470763 SPANXCQ9NY87 97 aa10.13□□□□□ -0.79
NPHP4-207ENST00000470763 IGHV1-58A0A0C4DH39 117 aa10.12□□□□□ -0.79
NPHP4-207ENST00000470763 FAM223BA6NKX1 122 aa10.12□□□□□ -0.79
NPHP4-207ENST00000470763 FAM223AQ8IWN6 122 aa10.12□□□□□ -0.79
NPHP4-207ENST00000470763 KLK5Q9Y337 293 aaPredicted RBP10.12□□□□□ -0.79
NPHP4-207ENST00000470763 LOC107984640A0A0U1RRK4 108 aa10.12□□□□□ -0.79
NPHP4-207ENST00000470763 FAM104AQ969W3 186 aa10.12□□□□□ -0.79
NPHP4-207ENST00000470763 VPS13CQ709C8 3753 aa10.12□□□□□ -0.79
NPHP4-207ENST00000470763 PDZD2O15018 2839 aa10.12□□□□□ -0.79
NPHP4-207ENST00000470763 MYO9AB2RTY4 2548 aa10.12□□□□□ -0.79
NPHP4-207ENST00000470763 AKAP9Q99996 3911 aa10.12□□□□□ -0.79
NPHP4-207ENST00000470763 A0A0U1RRA0 63 aa10.12□□□□□ -0.79
NPHP4-207ENST00000470763 OTOGQ6ZRI0 2925 aa10.11□□□□□ -0.79
NPHP4-207ENST00000470763 C9orf85Q96MD7 179 aa10.11□□□□□ -0.79
NPHP4-207ENST00000470763 MRPS36P82909 103 aaKnown RBP10.1□□□□□ -0.79
NPHP4-207ENST00000470763 UBTD1Q9HAC8 227 aa10.1□□□□□ -0.79
NPHP4-207ENST00000470763 NACAE9PAV3 2078 aa10.1□□□□□ -0.79
NPHP4-207ENST00000470763 PROK1P58294 105 aa10.1□□□□□ -0.79
NPHP4-207ENST00000470763 VSIG2Q96IQ7 327 aa10.1□□□□□ -0.79
NPHP4-207ENST00000470763 ATP5J2P56134 94 aa10.1□□□□□ -0.79
NPHP4-207ENST00000470763 POLQO75417 2590 aa10.1□□□□□ -0.79
NPHP4-207ENST00000470763 CREBBPQ92793 2442 aa10.09□□□□□ -0.79
NPHP4-207ENST00000470763 PF4V1P10720 104 aa10.09□□□□□ -0.79
NPHP4-207ENST00000470763 HTN1P15515 57 aa10.09□□□□□ -0.79
NPHP4-207ENST00000470763 CITED2Q99967 270 aaPredicted RBP10.09□□□□□ -0.79
NPHP4-207ENST00000470763 NPFFO15130 113 aa10.08□□□□□ -0.8
NPHP4-207ENST00000470763 NDUFA7O95182 113 aa10.08□□□□□ -0.8
NPHP4-207ENST00000470763 SPINK13Q1W4C9 94 aa10.08□□□□□ -0.8
NPHP4-207ENST00000470763 C3orf22Q8N5N4 141 aa10.08□□□□□ -0.8
NPHP4-207ENST00000470763 ZNF625Q96I27 306 aaPredicted RBP10.08□□□□□ -0.8
NPHP4-207ENST00000470763 Q9UF83 564 aa10.08□□□□□ -0.8
NPHP4-207ENST00000470763 C19orf54Q5BKX5 351 aa10.08□□□□□ -0.8
NPHP4-207ENST00000470763 MOB4Q9Y3A3 225 aa10.08□□□□□ -0.8
NPHP4-207ENST00000470763 C19orf84I3L1E1 186 aa10.07□□□□□ -0.8
NPHP4-207ENST00000470763 HERVK_113P63121 156 aa10.07□□□□□ -0.8
NPHP4-207ENST00000470763 LY6EQ16553 131 aa10.07□□□□□ -0.8
NPHP4-207ENST00000470763 C11orf71Q6IPW1 123 aa10.07□□□□□ -0.8
NPHP4-207ENST00000470763 BRD3OSQ6XYD6 125 aa10.07□□□□□ -0.8
NPHP4-207ENST00000470763 DAZ1Q9NQZ3 744 aaKnown RBP10.07□□□□□ -0.8
NPHP4-207ENST00000470763 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.06□□□□□ -0.8
NPHP4-207ENST00000470763 IGKV2-29A2NJV5 120 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 2517.3 ms