RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 COTL1Q14019 142 aa10.14□□□□□ -0.79
CDC42SE1-203ENST00000470278 NIT1Q86X76 327 aa10.14□□□□□ -0.79
CDC42SE1-203ENST00000470278 ORMDL3Q8N138 153 aa10.14□□□□□ -0.79
CDC42SE1-203ENST00000470278 C10orf126Q8N4M7 172 aa10.14□□□□□ -0.79
CDC42SE1-203ENST00000470278 C20orf78Q9BR46 151 aa10.14□□□□□ -0.79
CDC42SE1-203ENST00000470278 GNB1LQ9BYB4 327 aa10.14□□□□□ -0.79
CDC42SE1-203ENST00000470278 LAMTOR2Q9Y2Q5 125 aa10.14□□□□□ -0.79
CDC42SE1-203ENST00000470278 TRAV9-2A0A087WT02 112 aa10.13□□□□□ -0.79
CDC42SE1-203ENST00000470278 IGHV1-24A0A0C4DH33 117 aa10.13□□□□□ -0.79
CDC42SE1-203ENST00000470278 A0A1B0GVY2 172 aa10.13□□□□□ -0.79
CDC42SE1-203ENST00000470278 I3L3M4 83 aa10.13□□□□□ -0.79
CDC42SE1-203ENST00000470278 HLA-DQA1P01909 254 aa10.13□□□□□ -0.79
CDC42SE1-203ENST00000470278 PKIAP61925 76 aa10.13□□□□□ -0.79
CDC42SE1-203ENST00000470278 RPL32P62910 135 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-203ENST00000470278 ELOBQ15370 118 aa10.13□□□□□ -0.79
CDC42SE1-203ENST00000470278 ATRAIDQ6UW56 229 aa10.13□□□□□ -0.79
CDC42SE1-203ENST00000470278 M0R2N4 97 aa10.12□□□□□ -0.79
CDC42SE1-203ENST00000470278 TNFRSF6BO95407 300 aa10.12□□□□□ -0.79
CDC42SE1-203ENST00000470278 MT-ND6P03923 174 aa10.12□□□□□ -0.79
CDC42SE1-203ENST00000470278 YPEL4Q96NS1 127 aa10.11□□□□□ -0.79
CDC42SE1-203ENST00000470278 HSPG2P98160 4391 aa10.1□□□□□ -0.79
CDC42SE1-203ENST00000470278 VCYO14598 125 aa10.1□□□□□ -0.79
CDC42SE1-203ENST00000470278 TSHBP01222 138 aa10.1□□□□□ -0.79
CDC42SE1-203ENST00000470278 NPYP01303 97 aa10.1□□□□□ -0.79
CDC42SE1-203ENST00000470278 AMTP48728 403 aa10.1□□□□□ -0.79
CDC42SE1-203ENST00000470278 LAGE3Q14657 143 aa10.1□□□□□ -0.79
CDC42SE1-203ENST00000470278 PRELID3AQ96N28 172 aa10.1□□□□□ -0.79
CDC42SE1-203ENST00000470278 CHCHD5Q9BSY4 110 aa10.1□□□□□ -0.79
CDC42SE1-203ENST00000470278 TMEM243Q9BU79 118 aa10.1□□□□□ -0.79
CDC42SE1-203ENST00000470278 A0A087WX48 190 aa10.09□□□□□ -0.79
CDC42SE1-203ENST00000470278 TGIF2-C20orf24A0A0A6YYL0 155 aa10.09□□□□□ -0.79
CDC42SE1-203ENST00000470278 PRSS47A8MTI9 375 aa10.09□□□□□ -0.79
CDC42SE1-203ENST00000470278 APCSP02743 223 aa10.09□□□□□ -0.79
CDC42SE1-203ENST00000470278 PMCHP20382 165 aa10.09□□□□□ -0.79
CDC42SE1-203ENST00000470278 C1orf134Q5TEV5 83 aa10.09□□□□□ -0.79
CDC42SE1-203ENST00000470278 C6orf223Q8N319 242 aa10.09□□□□□ -0.79
CDC42SE1-203ENST00000470278 SMIM2Q9BVW6 85 aa10.09□□□□□ -0.79
CDC42SE1-203ENST00000470278 SMCO4Q9NRQ5 59 aa10.09□□□□□ -0.79
CDC42SE1-203ENST00000470278 IBA57-AS1B1ANH7 110 aa10.08□□□□□ -0.8
CDC42SE1-203ENST00000470278 H7C423 109 aa10.08□□□□□ -0.8
CDC42SE1-203ENST00000470278 TCAPO15273 167 aa10.08□□□□□ -0.8
CDC42SE1-203ENST00000470278 IGHV3-30P01768 117 aa10.08□□□□□ -0.8
CDC42SE1-203ENST00000470278 IGHV3-33P01772 117 aa10.08□□□□□ -0.8
CDC42SE1-203ENST00000470278 IGHV3-30-3P0DP02 117 aa10.08□□□□□ -0.8
CDC42SE1-203ENST00000470278 IGHV3-30-5P0DP03 117 aa10.08□□□□□ -0.8
CDC42SE1-203ENST00000470278 MPV17L2Q567V2 206 aa10.08□□□□□ -0.8
CDC42SE1-203ENST00000470278 Q8N3U1 123 aa10.08□□□□□ -0.8
CDC42SE1-203ENST00000470278 KIR2DL4Q99706 377 aa10.08□□□□□ -0.8
CDC42SE1-203ENST00000470278 ESDP10768 282 aa10.07□□□□□ -0.8
CDC42SE1-203ENST00000470278 CBLN2Q8IUK8 224 aa10.07□□□□□ -0.8
CDC42SE1-203ENST00000470278 A0A1B0GUV1 79 aa10.06□□□□□ -0.8
CDC42SE1-203ENST00000470278 TMEM262E9PQX1 116 aa10.06□□□□□ -0.8
CDC42SE1-203ENST00000470278 UBE2L6O14933 153 aa10.06□□□□□ -0.8
CDC42SE1-203ENST00000470278 RTL8CO15255 209 aa10.06□□□□□ -0.8
CDC42SE1-203ENST00000470278 NFE4Q86UQ8 179 aa10.06□□□□□ -0.8
CDC42SE1-203ENST00000470278 MRPL18Q9H0U6 180 aaKnown RBP10.06□□□□□ -0.8
CDC42SE1-203ENST00000470278 FCER1GP30273 86 aa10.05□□□□□ -0.8
CDC42SE1-203ENST00000470278 RBX1P62877 108 aa10.05□□□□□ -0.8
CDC42SE1-203ENST00000470278 GAGE6Q13070 117 aa10.05□□□□□ -0.8
CDC42SE1-203ENST00000470278 LINC00336Q6ZUF6 198 aa10.05□□□□□ -0.8
CDC42SE1-203ENST00000470278 DEFB104AQ8WTQ1 72 aa10.05□□□□□ -0.8
CDC42SE1-203ENST00000470278 MAP1LC3AQ9H492 121 aa10.05□□□□□ -0.8
CDC42SE1-203ENST00000470278 Q6ZRN7 208 aaPredicted RBP10.04□□□□□ -0.8
CDC42SE1-203ENST00000470278 Q8N976 141 aa10.04□□□□□ -0.8
CDC42SE1-203ENST00000470278 TRAV8-3A0A0A6YYJ7 113 aa10.03□□□□□ -0.8
CDC42SE1-203ENST00000470278 K7EMI3 77 aa10.03□□□□□ -0.8
CDC42SE1-203ENST00000470278 ZNF25P17030 456 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE1-203ENST00000470278 KIAA1644Q3SXP7 199 aa10.03□□□□□ -0.8
CDC42SE1-203ENST00000470278 ALKBH7Q9BT30 221 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE1-203ENST00000470278 KRTAP4-5Q9BYR2 181 aa10.03□□□□□ -0.8
CDC42SE1-203ENST00000470278 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-203ENST00000470278 IGKV2-29A2NJV5 120 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-203ENST00000470278 FABP9Q0Z7S8 132 aa10.02□□□□□ -0.81
CDC42SE1-203ENST00000470278 MRPL52Q86TS9 123 aaKnown RBP10.02□□□□□ -0.81
CDC42SE1-203ENST00000470278 NXT2Q9NPJ8 142 aaKnown RBP10.02□□□□□ -0.81
CDC42SE1-203ENST00000470278 PRR34Q9NV39 138 aa10.02□□□□□ -0.81
CDC42SE1-203ENST00000470278 KLK12Q9UKR0 248 aa10.02□□□□□ -0.81
CDC42SE1-203ENST00000470278 TRAPPC1Q9Y5R8 145 aa10.02□□□□□ -0.81
CDC42SE1-203ENST00000470278 LRP1BQ9NZR2 4599 aa10.01□□□□□ -0.81
CDC42SE1-203ENST00000470278 ANGP03950 147 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-203ENST00000470278 FGF6P10767 208 aa10.01□□□□□ -0.81
CDC42SE1-203ENST00000470278 Q0VG73 95 aa10.01□□□□□ -0.81
CDC42SE1-203ENST00000470278 Q8N8P6 123 aa10.01□□□□□ -0.81
CDC42SE1-203ENST00000470278 C20orf203Q8NBC4 194 aa10.01□□□□□ -0.81
CDC42SE1-203ENST00000470278 IGLV4-60A0A075B6I1 120 aa10□□□□□ -0.81
CDC42SE1-203ENST00000470278 CRPP02741 224 aa10□□□□□ -0.81
CDC42SE1-203ENST00000470278 AMMECR1LQ6DCA0 310 aa10□□□□□ -0.81
CDC42SE1-203ENST00000470278 LOC389332A0A1B0GUA5 103 aa9.99□□□□□ -0.81
CDC42SE1-203ENST00000470278 RAB5AP20339 215 aa9.99□□□□□ -0.81
CDC42SE1-203ENST00000470278 SMAGPQ0VAQ4 97 aa9.99□□□□□ -0.81
CDC42SE1-203ENST00000470278 MIAQ16674 131 aa9.99□□□□□ -0.81
CDC42SE1-203ENST00000470278 ENHOQ6UWT2 76 aa9.99□□□□□ -0.81
CDC42SE1-203ENST00000470278 UBE2WQ96B02 151 aa9.99□□□□□ -0.81
CDC42SE1-203ENST00000470278 TMEM18Q96B42 140 aa9.99□□□□□ -0.81
CDC42SE1-203ENST00000470278 Q9HAA7 133 aa9.99□□□□□ -0.81
CDC42SE1-203ENST00000470278 CSDC2Q9Y534 153 aaKnown RBP9.99□□□□□ -0.81
CDC42SE1-203ENST00000470278 PRSS29PA6NIE9 313 aa9.98□□□□□ -0.81
CDC42SE1-203ENST00000470278 ORMDL2Q53FV1 153 aa9.98□□□□□ -0.81
CDC42SE1-203ENST00000470278 LINC00269Q8N2A0 174 aa9.98□□□□□ -0.81
CDC42SE1-203ENST00000470278 RMI2Q96E14 147 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms