RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 DAZ2Q13117 558 aaKnown RBP3.34□□□□□ -1.87
SF3B1-208ENST00000470268 ZNF876PQ49A33 203 aa3.34□□□□□ -1.87
SF3B1-208ENST00000470268 FAM222AQ5U5X8 452 aa3.34□□□□□ -1.87
SF3B1-208ENST00000470268 LINC00173Q6ZV60 143 aa3.34□□□□□ -1.87
SF3B1-208ENST00000470268 POM121L12Q8N7R1 296 aa3.34□□□□□ -1.87
SF3B1-208ENST00000470268 ORAOV1Q8WV07 137 aa3.34□□□□□ -1.87
SF3B1-208ENST00000470268 CNFNQ9BYD5 112 aa3.34□□□□□ -1.87
SF3B1-208ENST00000470268 SAMD10Q9BYL1 202 aa3.34□□□□□ -1.87
SF3B1-208ENST00000470268 PAM16Q9Y3D7 125 aa3.34□□□□□ -1.87
SF3B1-208ENST00000470268 IGHV4-4A0A075B6R2 117 aa3.34□□□□□ -1.88
SF3B1-208ENST00000470268 TRGV1A0A0A0MS02 117 aa3.34□□□□□ -1.88
SF3B1-208ENST00000470268 M0R2P5 195 aa3.34□□□□□ -1.88
SF3B1-208ENST00000470268 GAGE7O76087 117 aa3.34□□□□□ -1.88
SF3B1-208ENST00000470268 MT-ND6P03923 174 aa3.34□□□□□ -1.88
SF3B1-208ENST00000470268 GAGE12FP0CL80 117 aa3.34□□□□□ -1.88
SF3B1-208ENST00000470268 GAGE12GP0CL81 117 aa3.34□□□□□ -1.88
SF3B1-208ENST00000470268 GAGE12IP0CL82 117 aa3.34□□□□□ -1.88
SF3B1-208ENST00000470268 RNASEKQ6P5S7 137 aaKnown RBP3.34□□□□□ -1.88
SF3B1-208ENST00000470268 TEX43Q6ZNM6 134 aa3.34□□□□□ -1.88
SF3B1-208ENST00000470268 ATP5L2Q7Z4Y8 100 aa3.34□□□□□ -1.88
SF3B1-208ENST00000470268 SPATA12Q7Z6I5 190 aa3.34□□□□□ -1.88
SF3B1-208ENST00000470268 NIT1Q86X76 327 aa3.34□□□□□ -1.88
SF3B1-208ENST00000470268 LINC00612Q8N6U2 182 aa3.34□□□□□ -1.88
SF3B1-208ENST00000470268 RASL10AQ92737 203 aa3.34□□□□□ -1.88
SF3B1-208ENST00000470268 PHLDA3Q9Y5J5 127 aa3.34□□□□□ -1.88
SF3B1-208ENST00000470268 MUC4Q99102 2169 aa3.33□□□□□ -1.88
SF3B1-208ENST00000470268 TRAV26-2A0A0B4J265 109 aa3.33□□□□□ -1.88
SF3B1-208ENST00000470268 LOC389332A0A1B0GUA5 103 aa3.33□□□□□ -1.88
SF3B1-208ENST00000470268 D6R8Y8 96 aa3.33□□□□□ -1.88
SF3B1-208ENST00000470268 CRYGDP07320 174 aa3.33□□□□□ -1.88
SF3B1-208ENST00000470268 DEFB130BP0DP73 79 aa3.33□□□□□ -1.88
SF3B1-208ENST00000470268 DEFB130AP0DP74 79 aa3.33□□□□□ -1.88
SF3B1-208ENST00000470268 EVI2AP22794 236 aa3.33□□□□□ -1.88
SF3B1-208ENST00000470268 AMTP48728 403 aa3.33□□□□□ -1.88
SF3B1-208ENST00000470268 UBE2V1Q13404 147 aa3.33□□□□□ -1.88
SF3B1-208ENST00000470268 LGALS9BQ3B8N2 356 aa3.33□□□□□ -1.88
SF3B1-208ENST00000470268 SPANXN1Q5VSR9 72 aa3.33□□□□□ -1.88
SF3B1-208ENST00000470268 STPG4Q8N801 248 aa3.33□□□□□ -1.88
SF3B1-208ENST00000470268 Q8N976 141 aa3.33□□□□□ -1.88
SF3B1-208ENST00000470268 C11orf68Q9H3H3 251 aaKnown RBP3.33□□□□□ -1.88
SF3B1-208ENST00000470268 EDA2RQ9HAV5 297 aa3.33□□□□□ -1.88
SF3B1-208ENST00000470268 KIF25-AS1Q9Y6Z4 181 aa3.33□□□□□ -1.88
SF3B1-208ENST00000470268 VCYO14598 125 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 IGHV3-53P01767 116 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 ESDP10768 282 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 LINC00315P59091 139 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 KRTDAPP60985 99 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 HERV-K104P63124 156 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 RIGQ13278 110 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 C12orf74Q32Q52 190 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 MRPL51Q4U2R6 128 aaKnown RBP3.32□□□□□ -1.88
SF3B1-208ENST00000470268 OR10J3Q5JRS4 329 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 CFAP126Q5VTH2 177 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 UFSP1Q6NVU6 142 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 RASL11AQ6T310 242 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 BOD1L2Q8IYS8 172 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 ATOH7Q8N100 152 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 C14orf178Q8N769 122 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-208ENST00000470268 DEFB104AQ8WTQ1 72 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 PTH2Q96A98 100 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 RNF185Q96GF1 192 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 VPS25Q9BRG1 176 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 VAMP8Q9BV40 100 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 IGHV3-73A0A0B4J1V6 119 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 LYRM9A8MSI8 78 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 RS1O15537 224 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 NPYP01303 97 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 SPART-AS1P0CW21 52 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 IFI27P40305 119 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-208ENST00000470268 NANOS2P60321 138 aaKnown RBP3.32□□□□□ -1.88
SF3B1-208ENST00000470268 CACNG7P62955 275 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 C5orf47Q569G3 176 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 FAM104BQ5XKR9 115 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-208ENST00000470268 Q6ZTC4 211 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 C18orf15Q96N68 181 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 TP73-AS1Q9UF72 201 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 Q9UF83 564 aa3.32□□□□□ -1.88
SF3B1-208ENST00000470268 TRGV2A0A075B6R0 118 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 IGHV1-24A0A0C4DH33 117 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 A0A1B0GV72 72 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 C3orf79P0CE67 100 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 COX19Q49B96 90 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 FAM74A4Q5TZK3 123 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 ERASQ7Z444 233 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 GATD1Q8NB37 220 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 OR4C5Q8NGB2 326 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 PMCHL2Q9BQD1 86 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 U3KQK5 164 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 A0A096LNJ9 63 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 TRAV4A0A0B4J268 109 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 A8MWV9 139 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 HSBP1O75506 76 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 DAD1P61803 113 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 GAGE4Q13068 117 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 Q6ZVH6 145 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 PRR26Q8N8Z3 221 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 NEXN-AS1Q8NBZ9 246 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 C11orf45Q8TAV5 145 aa3.31□□□□□ -1.88
SF3B1-208ENST00000470268 BORCS7Q96B45 105 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms