RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 LINC00526Q96FQ7 95 aa5.63□□□□□ -1.51
CCDC171-204ENST00000470191 FMC1Q96HJ9 113 aa5.63□□□□□ -1.51
CCDC171-204ENST00000470191 PSMG3Q9BT73 122 aaPredicted RBP5.63□□□□□ -1.51
CCDC171-204ENST00000470191 FAM231BA6NCW3 169 aa5.62□□□□□ -1.51
CCDC171-204ENST00000470191 CST9LP1Q5W188 147 aa5.62□□□□□ -1.51
CCDC171-204ENST00000470191 A0A1B0GUV1 79 aa5.61□□□□□ -1.51
CCDC171-204ENST00000470191 LTAP01374 205 aa5.61□□□□□ -1.51
CCDC171-204ENST00000470191 AKR1C3P42330 323 aa5.61□□□□□ -1.51
CCDC171-204ENST00000470191 SERF2P84101 59 aa5.61□□□□□ -1.51
CCDC171-204ENST00000470191 COX8CQ7Z4L0 72 aa5.61□□□□□ -1.51
CCDC171-204ENST00000470191 PRR26Q8N8Z3 221 aa5.61□□□□□ -1.51
CCDC171-204ENST00000470191 AP1S3Q96PC3 154 aa5.61□□□□□ -1.51
CCDC171-204ENST00000470191 TPPP3Q9BW30 176 aa5.61□□□□□ -1.51
CCDC171-204ENST00000470191 TNFSF18Q9UNG2 199 aa5.61□□□□□ -1.51
CCDC171-204ENST00000470191 TRAV26-2A0A0B4J265 109 aa5.6□□□□□ -1.51
CCDC171-204ENST00000470191 A0A0U1RQV1 116 aa5.6□□□□□ -1.51
CCDC171-204ENST00000470191 CTXND1A0A1B0GTU2 59 aa5.6□□□□□ -1.51
CCDC171-204ENST00000470191 SNAI2O43623 268 aa5.6□□□□□ -1.51
CCDC171-204ENST00000470191 AMTP48728 403 aa5.6□□□□□ -1.51
CCDC171-204ENST00000470191 CACNG7P62955 275 aa5.6□□□□□ -1.51
CCDC171-204ENST00000470191 PRR4Q16378 134 aa5.6□□□□□ -1.51
CCDC171-204ENST00000470191 SUMO4Q6EEV6 95 aa5.6□□□□□ -1.51
CCDC171-204ENST00000470191 STOML3Q8TAV4 291 aa5.6□□□□□ -1.51
CCDC171-204ENST00000470191 CHCHD10Q8WYQ3 142 aaPredicted RBP5.6□□□□□ -1.51
CCDC171-204ENST00000470191 M0QY20 66 aa5.59□□□□□ -1.51
CCDC171-204ENST00000470191 MT-ND6P03923 174 aa5.59□□□□□ -1.51
CCDC171-204ENST00000470191 DEFA1P59665 94 aa5.59□□□□□ -1.51
CCDC171-204ENST00000470191 GAGE2BQ13066 116 aa5.59□□□□□ -1.51
CCDC171-204ENST00000470191 RPL7L1Q6DKI1 246 aaKnown RBP5.59□□□□□ -1.51
CCDC171-204ENST00000470191 NKX6-2Q9C056 277 aaPredicted RBP5.59□□□□□ -1.51
CCDC171-204ENST00000470191 LINC00474Q9P2X8 69 aa5.59□□□□□ -1.51
CCDC171-204ENST00000470191 GVQW2A0A096LPI5 108 aaPredicted RBP5.58□□□□□ -1.52
CCDC171-204ENST00000470191 OR5AL1P0C617 328 aa5.58□□□□□ -1.52
CCDC171-204ENST00000470191 AMMECR1LQ6DCA0 310 aa5.58□□□□□ -1.52
CCDC171-204ENST00000470191 RNASEKQ6P5S7 137 aaKnown RBP5.58□□□□□ -1.52
CCDC171-204ENST00000470191 CARD19Q96LW7 228 aa5.58□□□□□ -1.52
CCDC171-204ENST00000470191 MAP1LC3B2A6NCE7 125 aa5.57□□□□□ -1.52
CCDC171-204ENST00000470191 UPK1BO75841 260 aa5.57□□□□□ -1.52
CCDC171-204ENST00000470191 CXCL1P09341 107 aa5.57□□□□□ -1.52
CCDC171-204ENST00000470191 XCL1P47992 114 aa5.57□□□□□ -1.52
CCDC171-204ENST00000470191 IFITM3Q01628 133 aa5.57□□□□□ -1.52
CCDC171-204ENST00000470191 COTL1Q14019 142 aa5.57□□□□□ -1.52
CCDC171-204ENST00000470191 C1orf137Q5JT78 98 aa5.57□□□□□ -1.52
CCDC171-204ENST00000470191 AKR1C8PQ5T2L2 129 aa5.57□□□□□ -1.52
CCDC171-204ENST00000470191 RASL11AQ6T310 242 aa5.57□□□□□ -1.52
CCDC171-204ENST00000470191 ZNF664Q8N3J9 261 aa5.57□□□□□ -1.52
CCDC171-204ENST00000470191 MARVELD1Q9BSK0 173 aa5.57□□□□□ -1.52
CCDC171-204ENST00000470191 MAP1LC3BQ9GZQ8 125 aa5.57□□□□□ -1.52
CCDC171-204ENST00000470191 PSORS1C2Q9UIG4 136 aa5.57□□□□□ -1.52
CCDC171-204ENST00000470191 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.56□□□□□ -1.52
CCDC171-204ENST00000470191 A0A1B0GV50 99 aa5.56□□□□□ -1.52
CCDC171-204ENST00000470191 A0A1W2PNN7 141 aa5.56□□□□□ -1.52
CCDC171-204ENST00000470191 IGKV2-29A2NJV5 120 aaPredicted RBP5.56□□□□□ -1.52
CCDC171-204ENST00000470191 PAGE4O60829 102 aa5.56□□□□□ -1.52
CCDC171-204ENST00000470191 FOXI1Q12951 378 aa5.56□□□□□ -1.52
CCDC171-204ENST00000470191 BAGE2Q86Y30 109 aa5.56□□□□□ -1.52
CCDC171-204ENST00000470191 NIT2Q9NQR4 276 aa5.56□□□□□ -1.52
CCDC171-204ENST00000470191 BORCS7-ASMTA0A0B4J1R7 106 aa5.55□□□□□ -1.52
CCDC171-204ENST00000470191 CCL25O15444 150 aa5.55□□□□□ -1.52
CCDC171-204ENST00000470191 PTTG1IPP53801 180 aa5.55□□□□□ -1.52
CCDC171-204ENST00000470191 SYCNQ0VAF6 134 aa5.55□□□□□ -1.52
CCDC171-204ENST00000470191 PHF5AQ7RTV0 110 aaKnown RBP5.55□□□□□ -1.52
CCDC171-204ENST00000470191 S100ZQ8WXG8 99 aa5.55□□□□□ -1.52
CCDC171-204ENST00000470191 PGLYRP4Q96LB8 373 aa5.55□□□□□ -1.52
CCDC171-204ENST00000470191 PKIGQ9Y2B9 76 aa5.55□□□□□ -1.52
CCDC171-204ENST00000470191 IGHV1-58A0A0C4DH39 117 aa5.54□□□□□ -1.52
CCDC171-204ENST00000470191 ZNF561-AS1K7EIQ3 104 aa5.54□□□□□ -1.52
CCDC171-204ENST00000470191 BCL2P10415 239 aa5.54□□□□□ -1.52
CCDC171-204ENST00000470191 Q5BKY6 102 aa5.54□□□□□ -1.52
CCDC171-204ENST00000470191 FER1L6-AS1Q8NA97 138 aa5.54□□□□□ -1.52
CCDC171-204ENST00000470191 hCG_2014768A0A024R1R8 64 aa5.53□□□□□ -1.52
CCDC171-204ENST00000470191 FXYD6-FXYD2A0A087WZ82 144 aa5.53□□□□□ -1.52
CCDC171-204ENST00000470191 LOC107984640A0A0U1RRK4 108 aa5.53□□□□□ -1.52
CCDC171-204ENST00000470191 S100A9P06702 114 aaKnown RBP5.53□□□□□ -1.52
CCDC171-204ENST00000470191 FHITP49789 147 aa5.53□□□□□ -1.52
CCDC171-204ENST00000470191 RPL18AQ02543 176 aaKnown RBP5.53□□□□□ -1.52
CCDC171-204ENST00000470191 C9orf116Q5BN46 136 aaPredicted RBP5.53□□□□□ -1.52
CCDC171-204ENST00000470191 Q6ZNX1 250 aa5.53□□□□□ -1.52
CCDC171-204ENST00000470191 OR2D3Q8NGH3 330 aa5.53□□□□□ -1.52
CCDC171-204ENST00000470191 MLST8Q9BVC4 326 aa5.53□□□□□ -1.52
CCDC171-204ENST00000470191 ALG5Q9Y673 324 aa5.53□□□□□ -1.52
CCDC171-204ENST00000470191 MUC2Q02817 5179 aa5.52□□□□□ -1.53
CCDC171-204ENST00000470191 PFDN1O60925 122 aa5.52□□□□□ -1.53
CCDC171-204ENST00000470191 IGLC6P0CF74 106 aa5.52□□□□□ -1.53
CCDC171-204ENST00000470191 FGF6P10767 208 aa5.52□□□□□ -1.53
CCDC171-204ENST00000470191 NTF3P20783 257 aa5.52□□□□□ -1.53
CCDC171-204ENST00000470191 CAMPP49913 170 aa5.52□□□□□ -1.53
CCDC171-204ENST00000470191 DIRC1Q969H9 104 aa5.52□□□□□ -1.53
CCDC171-204ENST00000470191 TCEAL7Q9BRU2 100 aa5.52□□□□□ -1.53
CCDC171-204ENST00000470191 IGLV4-69A0A075B6H9 119 aa5.51□□□□□ -1.53
CCDC171-204ENST00000470191 LINC00959A0A1B0GUT2 108 aa5.51□□□□□ -1.53
CCDC171-204ENST00000470191 TSPAN13O95857 204 aa5.51□□□□□ -1.53
CCDC171-204ENST00000470191 APCSP02743 223 aa5.51□□□□□ -1.53
CCDC171-204ENST00000470191 IGLV7-43P04211 117 aa5.51□□□□□ -1.53
CCDC171-204ENST00000470191 TRGC1P0CF51 173 aa5.51□□□□□ -1.53
CCDC171-204ENST00000470191 EIF5AP63241 154 aaKnown RBP5.51□□□□□ -1.53
CCDC171-204ENST00000470191 LYZL1Q6UWQ5 148 aa5.51□□□□□ -1.53
CCDC171-204ENST00000470191 TMUB2Q71RG4 321 aa5.51□□□□□ -1.53
CCDC171-204ENST00000470191 OR5A1Q8NGJ0 315 aa5.51□□□□□ -1.53
CCDC171-204ENST00000470191 RPL39LQ96EH5 51 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms