RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 TRBV25-1A0A075B6N4 114 aa14.28□□□□□ -0.12
BRAF-202ENST00000469930 C1orf196B1AJZ1 125 aa14.28□□□□□ -0.12
BRAF-202ENST00000469930 IFI27P40305 119 aaPredicted RBP14.28□□□□□ -0.12
BRAF-202ENST00000469930 H7C423 109 aa14.27□□□□□ -0.13
BRAF-202ENST00000469930 HIST1H2BKO60814 126 aa14.27□□□□□ -0.13
BRAF-202ENST00000469930 HIST1H2BJP06899 126 aa14.27□□□□□ -0.13
BRAF-202ENST00000469930 HIST1H2BOP23527 126 aa14.27□□□□□ -0.13
BRAF-202ENST00000469930 HIST1H2BBP33778 126 aa14.27□□□□□ -0.13
BRAF-202ENST00000469930 HIST1H2BDP58876 126 aa14.27□□□□□ -0.13
BRAF-202ENST00000469930 HIST1H2BCP62807 126 aa14.27□□□□□ -0.13
BRAF-202ENST00000469930 HIST2H2BEQ16778 126 aa14.27□□□□□ -0.13
BRAF-202ENST00000469930 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.27□□□□□ -0.13
BRAF-202ENST00000469930 LGALS9CQ6DKI2 356 aa14.27□□□□□ -0.13
BRAF-202ENST00000469930 HIST1H2BHQ93079 126 aa14.27□□□□□ -0.13
BRAF-202ENST00000469930 HIST1H2BNQ99877 126 aa14.27□□□□□ -0.13
BRAF-202ENST00000469930 HIST1H2BMQ99879 126 aa14.27□□□□□ -0.13
BRAF-202ENST00000469930 TRAV8-6A0A0B4J262 113 aa14.26□□□□□ -0.13
BRAF-202ENST00000469930 LINC00614P0C842 121 aa14.26□□□□□ -0.13
BRAF-202ENST00000469930 FCER1GP30273 86 aa14.26□□□□□ -0.13
BRAF-202ENST00000469930 PKIAP61925 76 aa14.26□□□□□ -0.13
BRAF-202ENST00000469930 ORMDL2Q53FV1 153 aa14.26□□□□□ -0.13
BRAF-202ENST00000469930 CHCHD7Q9BUK0 85 aa14.26□□□□□ -0.13
BRAF-202ENST00000469930 G0S2P27469 103 aa14.25□□□□□ -0.13
BRAF-202ENST00000469930 AMTP48728 403 aa14.25□□□□□ -0.13
BRAF-202ENST00000469930 NIT1Q86X76 327 aa14.25□□□□□ -0.13
BRAF-202ENST00000469930 URB1-AS1Q96HZ7 61 aa14.25□□□□□ -0.13
BRAF-202ENST00000469930 TMEM243Q9BU79 118 aa14.25□□□□□ -0.13
BRAF-202ENST00000469930 LAGE3Q14657 143 aa14.24□□□□□ -0.13
BRAF-202ENST00000469930 FA2HQ7L5A8 372 aa14.24□□□□□ -0.13
BRAF-202ENST00000469930 CHCHD1Q96BP2 118 aaKnown RBP14.24□□□□□ -0.13
BRAF-202ENST00000469930 C20orf203Q8NBC4 194 aa14.23□□□□□ -0.13
BRAF-202ENST00000469930 AP5S1Q9NUS5 200 aa14.23□□□□□ -0.13
BRAF-202ENST00000469930 LINC01549A6NIU2 74 aa14.22□□□□□ -0.13
BRAF-202ENST00000469930 TMEM18Q96B42 140 aa14.22□□□□□ -0.13
BRAF-202ENST00000469930 COA6Q5JTJ3 125 aaKnown RBP14.21□□□□□ -0.13
BRAF-202ENST00000469930 BAGE3Q86Y29 109 aa14.21□□□□□ -0.13
BRAF-202ENST00000469930 A0A1B0GUV1 79 aa14.2□□□□□ -0.14
BRAF-202ENST00000469930 K7EP13 123 aa14.2□□□□□ -0.14
BRAF-202ENST00000469930 DNAH10OSP0CZ25 163 aa14.2□□□□□ -0.14
BRAF-202ENST00000469930 SMAGPQ0VAQ4 97 aa14.2□□□□□ -0.14
BRAF-202ENST00000469930 UBE2DNLQ8IWF7 75 aa14.2□□□□□ -0.14
BRAF-202ENST00000469930 TIMM21Q9BVV7 248 aa14.2□□□□□ -0.14
BRAF-202ENST00000469930 VPS13DQ5THJ4 4388 aa14.2□□□□□ -0.14
BRAF-202ENST00000469930 MRPL52Q86TS9 123 aaKnown RBP14.19□□□□□ -0.14
BRAF-202ENST00000469930 DEFB104AQ8WTQ1 72 aa14.19□□□□□ -0.14
BRAF-202ENST00000469930 CHCHD5Q9BSY4 110 aa14.19□□□□□ -0.14
BRAF-202ENST00000469930 CSDC2Q9Y534 153 aaKnown RBP14.19□□□□□ -0.14
BRAF-202ENST00000469930 TENM2Q9NT68 2774 aa14.19□□□□□ -0.14
BRAF-202ENST00000469930 SIVA1O15304 175 aa14.18□□□□□ -0.14
BRAF-202ENST00000469930 ZNF25P17030 456 aaPredicted RBP14.18□□□□□ -0.14
BRAF-202ENST00000469930 LINC01556Q5JQF7 62 aa14.18□□□□□ -0.14
BRAF-202ENST00000469930 WFDC10BQ8IUB3 73 aa14.18□□□□□ -0.14
BRAF-202ENST00000469930 Q9H8V8 135 aa14.18□□□□□ -0.14
BRAF-202ENST00000469930 UBE2L6O14933 153 aa14.17□□□□□ -0.14
BRAF-202ENST00000469930 LINC00310P59036 64 aa14.17□□□□□ -0.14
BRAF-202ENST00000469930 LINC00476Q8WZB0 136 aa14.17□□□□□ -0.14
BRAF-202ENST00000469930 NPSP0C0P6 89 aa14.16□□□□□ -0.14
BRAF-202ENST00000469930 RNASEKQ6P5S7 137 aaKnown RBP14.16□□□□□ -0.14
BRAF-202ENST00000469930 CYSLTR1Q9Y271 337 aa14.16□□□□□ -0.14
BRAF-202ENST00000469930 PYGO1Q9Y3Y4 419 aa14.16□□□□□ -0.14
BRAF-202ENST00000469930 SERF1AO75920 110 aa14.15□□□□□ -0.14
BRAF-202ENST00000469930 GAGE6Q13070 117 aa14.15□□□□□ -0.14
BRAF-202ENST00000469930 C2orf66Q6UXQ4 117 aa14.15□□□□□ -0.14
BRAF-202ENST00000469930 TOMM6Q96B49 74 aa14.15□□□□□ -0.14
BRAF-202ENST00000469930 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.14□□□□□ -0.15
BRAF-202ENST00000469930 IGKV2-29A2NJV5 120 aaPredicted RBP14.14□□□□□ -0.15
BRAF-202ENST00000469930 FGF6P10767 208 aa14.14□□□□□ -0.15
BRAF-202ENST00000469930 SPANXA1Q9NS26 97 aa14.14□□□□□ -0.15
BRAF-202ENST00000469930 UBE2D4Q9Y2X8 147 aa14.14□□□□□ -0.15
BRAF-202ENST00000469930 A0A087WX48 190 aa14.13□□□□□ -0.15
BRAF-202ENST00000469930 A0A096LNJ9 63 aa14.13□□□□□ -0.15
BRAF-202ENST00000469930 TMEM262E9PQX1 116 aa14.13□□□□□ -0.15
BRAF-202ENST00000469930 HSBP1O75506 76 aa14.13□□□□□ -0.15
BRAF-202ENST00000469930 RBX1P62877 108 aa14.13□□□□□ -0.15
BRAF-202ENST00000469930 DNAH1Q9P2D7 4330 aa14.13□□□□□ -0.15
BRAF-202ENST00000469930 ALMS1Q8TCU4 4167 aa14.13□□□□□ -0.15
BRAF-202ENST00000469930 HBDP02042 147 aa14.12□□□□□ -0.15
BRAF-202ENST00000469930 RPL39P62891 51 aaKnown RBP14.12□□□□□ -0.15
BRAF-202ENST00000469930 MPV17L2Q567V2 206 aa14.12□□□□□ -0.15
BRAF-202ENST00000469930 TRAV9-2A0A087WT02 112 aa14.11□□□□□ -0.15
BRAF-202ENST00000469930 IGIPA6NJ69 53 aa14.11□□□□□ -0.15
BRAF-202ENST00000469930 NUPR1O60356 82 aa14.11□□□□□ -0.15
BRAF-202ENST00000469930 BTF3P20290 206 aaKnown RBP14.11□□□□□ -0.15
BRAF-202ENST00000469930 MRPS36P82909 103 aaKnown RBP14.11□□□□□ -0.15
BRAF-202ENST00000469930 AMMECR1LQ6DCA0 310 aa14.11□□□□□ -0.15
BRAF-202ENST00000469930 C10orf126Q8N4M7 172 aa14.11□□□□□ -0.15
BRAF-202ENST00000469930 TIMM17AQ99595 171 aa14.11□□□□□ -0.15
BRAF-202ENST00000469930 NDUFA6P56556 154 aa14.1□□□□□ -0.15
BRAF-202ENST00000469930 PDZD11Q5EBL8 140 aa14.1□□□□□ -0.15
BRAF-202ENST00000469930 ERASQ7Z444 233 aa14.1□□□□□ -0.15
BRAF-202ENST00000469930 TMEM101Q96IK0 257 aa14.1□□□□□ -0.15
BRAF-202ENST00000469930 TMEM141Q96I45 108 aa14.09□□□□□ -0.15
BRAF-202ENST00000469930 LYSTQ99698 3801 aa14.09□□□□□ -0.15
BRAF-202ENST00000469930 CDC42SE2Q9NRR3 84 aa14.09□□□□□ -0.15
BRAF-202ENST00000469930 LY6G6CO95867 125 aa14.08□□□□□ -0.16
BRAF-202ENST00000469930 TTC32Q5I0X7 151 aa14.08□□□□□ -0.16
BRAF-202ENST00000469930 DGAT2L7PQ6IED9 249 aa14.08□□□□□ -0.16
BRAF-202ENST00000469930 OR5A1Q8NGJ0 315 aa14.08□□□□□ -0.16
BRAF-202ENST00000469930 FAM104AQ969W3 186 aa14.08□□□□□ -0.16
BRAF-202ENST00000469930 IGLV4-60A0A075B6I1 120 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms