RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 ZNF415Q09FC8 603 aa12.48□□□□□ -0.41
MRPL28-208ENST00000469744 ODF1Q14990 250 aa12.48□□□□□ -0.41
MRPL28-208ENST00000469744 C18orf15Q96N68 181 aa12.48□□□□□ -0.41
MRPL28-208ENST00000469744 PRSS1P07477 247 aa12.47□□□□□ -0.41
MRPL28-208ENST00000469744 TMEM208Q9BTX3 173 aa12.47□□□□□ -0.41
MRPL28-208ENST00000469744 JPT2Q9H910 190 aa12.47□□□□□ -0.41
MRPL28-208ENST00000469744 TRAV12-1A0A0B4J245 112 aa12.46□□□□□ -0.41
MRPL28-208ENST00000469744 SPART-AS1P0CW21 52 aa12.46□□□□□ -0.41
MRPL28-208ENST00000469744 ZNF876PQ49A33 203 aa12.46□□□□□ -0.41
MRPL28-208ENST00000469744 FAM222AQ5U5X8 452 aa12.46□□□□□ -0.41
MRPL28-208ENST00000469744 SPXQ9BT56 116 aa12.46□□□□□ -0.41
MRPL28-208ENST00000469744 VPS13DQ5THJ4 4388 aa12.46□□□□□ -0.41
MRPL28-208ENST00000469744 A0A087WWL8 130 aa12.46□□□□□ -0.42
MRPL28-208ENST00000469744 F5H697 171 aa12.46□□□□□ -0.42
MRPL28-208ENST00000469744 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.46□□□□□ -0.42
MRPL28-208ENST00000469744 M0R2P5 195 aa12.46□□□□□ -0.42
MRPL28-208ENST00000469744 TCTAP57738 103 aa12.46□□□□□ -0.42
MRPL28-208ENST00000469744 RRN3P1Q2M238 152 aa12.46□□□□□ -0.42
MRPL28-208ENST00000469744 DKK2Q9UBU2 259 aa12.46□□□□□ -0.42
MRPL28-208ENST00000469744 A0A087WX48 190 aa12.45□□□□□ -0.42
MRPL28-208ENST00000469744 TRBV27A0A0K0K1C4 114 aa12.45□□□□□ -0.42
MRPL28-208ENST00000469744 A8MWV9 139 aa12.45□□□□□ -0.42
MRPL28-208ENST00000469744 M0QY20 66 aa12.45□□□□□ -0.42
MRPL28-208ENST00000469744 DLEU1O43261 78 aa12.45□□□□□ -0.42
MRPL28-208ENST00000469744 DPM2O94777 84 aa12.45□□□□□ -0.42
MRPL28-208ENST00000469744 A0A1B0GV90 55 aa12.44□□□□□ -0.42
MRPL28-208ENST00000469744 H7C1H1 209 aa12.44□□□□□ -0.42
MRPL28-208ENST00000469744 IGKCP01834 107 aa12.44□□□□□ -0.42
MRPL28-208ENST00000469744 COL5A1-AS1Q5SY13 56 aa12.44□□□□□ -0.42
MRPL28-208ENST00000469744 SCGB3A1Q96QR1 104 aa12.44□□□□□ -0.42
MRPL28-208ENST00000469744 KIR2DL4Q99706 377 aa12.44□□□□□ -0.42
MRPL28-208ENST00000469744 FRAS1Q86XX4 4008 aa12.43□□□□□ -0.42
MRPL28-208ENST00000469744 ZNF56Q15929 161 aa12.43□□□□□ -0.42
MRPL28-208ENST00000469744 ANKRD39Q53RE8 183 aa12.43□□□□□ -0.42
MRPL28-208ENST00000469744 LINC01587Q99440 93 aa12.43□□□□□ -0.42
MRPL28-208ENST00000469744 BIRC6Q9NR09 4857 aa12.43□□□□□ -0.42
MRPL28-208ENST00000469744 HTN3P15516 51 aa12.42□□□□□ -0.42
MRPL28-208ENST00000469744 RHOHQ15669 191 aa12.42□□□□□ -0.42
MRPL28-208ENST00000469744 C2orf66Q6UXQ4 117 aa12.42□□□□□ -0.42
MRPL28-208ENST00000469744 ERASQ7Z444 233 aa12.42□□□□□ -0.42
MRPL28-208ENST00000469744 SDHAF1A6NFY7 115 aa12.41□□□□□ -0.42
MRPL28-208ENST00000469744 SIVA1O15304 175 aa12.41□□□□□ -0.42
MRPL28-208ENST00000469744 FAM74A4Q5TZK3 123 aa12.41□□□□□ -0.42
MRPL28-208ENST00000469744 BOD1L2Q8IYS8 172 aa12.41□□□□□ -0.42
MRPL28-208ENST00000469744 C11orf72Q8NBR9 251 aa12.41□□□□□ -0.42
MRPL28-208ENST00000469744 HHLA3Q9XRX5 114 aa12.41□□□□□ -0.42
MRPL28-208ENST00000469744 CYSLTR1Q9Y271 337 aa12.41□□□□□ -0.42
MRPL28-208ENST00000469744 RHODO00212 210 aa12.4□□□□□ -0.42
MRPL28-208ENST00000469744 FGF6P10767 208 aa12.4□□□□□ -0.42
MRPL28-208ENST00000469744 AZU1P20160 251 aa12.4□□□□□ -0.42
MRPL28-208ENST00000469744 PLNP26678 52 aa12.4□□□□□ -0.42
MRPL28-208ENST00000469744 UFSP1Q6NVU6 142 aa12.4□□□□□ -0.42
MRPL28-208ENST00000469744 ZFP2Q6ZN57 461 aa12.4□□□□□ -0.42
MRPL28-208ENST00000469744 TEX48A0A1B0GUV7 120 aa12.4□□□□□ -0.43
MRPL28-208ENST00000469744 F8VRH5 84 aa12.4□□□□□ -0.43
MRPL28-208ENST00000469744 HTN1P15515 57 aa12.4□□□□□ -0.43
MRPL28-208ENST00000469744 STPG4Q8N801 248 aa12.4□□□□□ -0.43
MRPL28-208ENST00000469744 NEXN-AS1Q8NBZ9 246 aa12.4□□□□□ -0.43
MRPL28-208ENST00000469744 TMEM141Q96I45 108 aa12.4□□□□□ -0.43
MRPL28-208ENST00000469744 DAD1P61803 113 aa12.39□□□□□ -0.43
MRPL28-208ENST00000469744 BATFQ16520 125 aa12.38□□□□□ -0.43
MRPL28-208ENST00000469744 TIMM17AQ99595 171 aa12.38□□□□□ -0.43
MRPL28-208ENST00000469744 MRPL35Q9NZE8 188 aaKnown RBP12.38□□□□□ -0.43
MRPL28-208ENST00000469744 BAALCQ8WXS3 180 aa12.37□□□□□ -0.43
MRPL28-208ENST00000469744 PLAC8L1A1L4L8 177 aa12.36□□□□□ -0.43
MRPL28-208ENST00000469744 IGIPA6NJ69 53 aa12.36□□□□□ -0.43
MRPL28-208ENST00000469744 I3L3M4 83 aa12.36□□□□□ -0.43
MRPL28-208ENST00000469744 RS1O15537 224 aa12.36□□□□□ -0.43
MRPL28-208ENST00000469744 C2orf91Q6ZV80 131 aa12.36□□□□□ -0.43
MRPL28-208ENST00000469744 CHTOPQ9Y3Y2 248 aaKnown RBP12.36□□□□□ -0.43
MRPL28-208ENST00000469744 DNAH10Q8IVF4 4471 aa12.36□□□□□ -0.43
MRPL28-208ENST00000469744 DEFB130BP0DP73 79 aa12.35□□□□□ -0.43
MRPL28-208ENST00000469744 DEFB130AP0DP74 79 aa12.35□□□□□ -0.43
MRPL28-208ENST00000469744 HINT1P49773 126 aaPredicted RBP12.35□□□□□ -0.43
MRPL28-208ENST00000469744 DNAJC30Q96LL9 226 aa12.35□□□□□ -0.43
MRPL28-208ENST00000469744 PAPPA-AS1Q5QFB9 102 aa12.34□□□□□ -0.43
MRPL28-208ENST00000469744 CFAP126Q5VTH2 177 aa12.34□□□□□ -0.43
MRPL28-208ENST00000469744 NEGR1Q7Z3B1 354 aa12.34□□□□□ -0.43
MRPL28-208ENST00000469744 NACAE9PAV3 2078 aa12.34□□□□□ -0.43
MRPL28-208ENST00000469744 LYRM9A8MSI8 78 aa12.34□□□□□ -0.43
MRPL28-208ENST00000469744 TSHBP01222 138 aa12.34□□□□□ -0.43
MRPL28-208ENST00000469744 P0DMU3 169 aa12.34□□□□□ -0.43
MRPL28-208ENST00000469744 FAM231AP0DMU4 169 aa12.34□□□□□ -0.43
MRPL28-208ENST00000469744 FAM231CP0DMU5 169 aa12.34□□□□□ -0.43
MRPL28-208ENST00000469744 ZC2HC1BQ5TFG8 222 aa12.34□□□□□ -0.43
MRPL28-208ENST00000469744 DNAH6Q9C0G6 4158 aa12.33□□□□□ -0.44
MRPL28-208ENST00000469744 IGHV3-53P01767 116 aa12.33□□□□□ -0.44
MRPL28-208ENST00000469744 BVES-AS1Q5T3Y7 98 aa12.33□□□□□ -0.44
MRPL28-208ENST00000469744 TMEM263Q8WUH6 116 aaKnown RBP12.33□□□□□ -0.44
MRPL28-208ENST00000469744 HIGD1BQ9P298 99 aa12.33□□□□□ -0.44
MRPL28-208ENST00000469744 PRSS29PA6NIE9 313 aa12.32□□□□□ -0.44
MRPL28-208ENST00000469744 NMUP48645 174 aa12.32□□□□□ -0.44
MRPL28-208ENST00000469744 PMVKQ15126 192 aa12.32□□□□□ -0.44
MRPL28-208ENST00000469744 MPV17L2Q567V2 206 aa12.32□□□□□ -0.44
MRPL28-208ENST00000469744 RNASE8Q8TDE3 154 aaKnown RBP12.32□□□□□ -0.44
MRPL28-208ENST00000469744 C16orf74Q96GX8 76 aa12.32□□□□□ -0.44
MRPL28-208ENST00000469744 C20orf203Q8NBC4 194 aa12.31□□□□□ -0.44
MRPL28-208ENST00000469744 NOP10Q9NPE3 64 aaKnown RBP12.31□□□□□ -0.44
MRPL28-208ENST00000469744 TP73-AS1Q9UF72 201 aa12.31□□□□□ -0.44
MRPL28-208ENST00000469744 TNFRSF18Q9Y5U5 241 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms