RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 C14orf177Q52M58 125 aa11.97□□□□□ -0.49
PHGDH-204ENST00000469443 Q6ZSA8 131 aa11.97□□□□□ -0.49
PHGDH-204ENST00000469443 OSTCQ9NRP0 149 aa11.97□□□□□ -0.49
PHGDH-204ENST00000469443 A0A1B0GUV1 79 aa11.96□□□□□ -0.49
PHGDH-204ENST00000469443 HLA-DQA1P01909 254 aa11.96□□□□□ -0.49
PHGDH-204ENST00000469443 AMTP48728 403 aa11.96□□□□□ -0.49
PHGDH-204ENST00000469443 TEX261Q6UWH6 196 aa11.96□□□□□ -0.49
PHGDH-204ENST00000469443 DEFB104AQ8WTQ1 72 aa11.96□□□□□ -0.49
PHGDH-204ENST00000469443 TSKUQ8WUA8 353 aa11.96□□□□□ -0.49
PHGDH-204ENST00000469443 BORCS7Q96B45 105 aa11.96□□□□□ -0.49
PHGDH-204ENST00000469443 UBE2L6O14933 153 aa11.95□□□□□ -0.5
PHGDH-204ENST00000469443 C20orf203Q8NBC4 194 aa11.95□□□□□ -0.5
PHGDH-204ENST00000469443 RPL39LQ96EH5 51 aaKnown RBP11.95□□□□□ -0.5
PHGDH-204ENST00000469443 GFRA4Q9GZZ7 299 aa11.95□□□□□ -0.5
PHGDH-204ENST00000469443 VPS13BQ7Z7G8 4022 aa11.95□□□□□ -0.5
PHGDH-204ENST00000469443 FAM231BA6NCW3 169 aa11.94□□□□□ -0.5
PHGDH-204ENST00000469443 HIGD1CA8MV81 97 aa11.94□□□□□ -0.5
PHGDH-204ENST00000469443 USP17L23D6RBM5 183 aa11.94□□□□□ -0.5
PHGDH-204ENST00000469443 REG3AQ06141 175 aa11.94□□□□□ -0.5
PHGDH-204ENST00000469443 LINC01620Q4KN68 170 aa11.94□□□□□ -0.5
PHGDH-204ENST00000469443 KRTAP26-1Q6PEX3 210 aa11.94□□□□□ -0.5
PHGDH-204ENST00000469443 IGLV4-60A0A075B6I1 120 aa11.93□□□□□ -0.5
PHGDH-204ENST00000469443 A0A1B0GUT8 65 aa11.93□□□□□ -0.5
PHGDH-204ENST00000469443 FAM229AH3BQW9 127 aa11.93□□□□□ -0.5
PHGDH-204ENST00000469443 FAM74A3Q4VXF1 159 aa11.93□□□□□ -0.5
PHGDH-204ENST00000469443 TMEM241Q24JQ0 296 aa11.92□□□□□ -0.5
PHGDH-204ENST00000469443 TRAV8-4A0A0B4J246 113 aa11.91□□□□□ -0.5
PHGDH-204ENST00000469443 NCR2O95944 276 aa11.91□□□□□ -0.5
PHGDH-204ENST00000469443 INAFM2P0DMQ5 153 aa11.91□□□□□ -0.5
PHGDH-204ENST00000469443 ISOC2Q96AB3 205 aa11.91□□□□□ -0.5
PHGDH-204ENST00000469443 TMEM191AQ9H0A3 160 aa11.91□□□□□ -0.5
PHGDH-204ENST00000469443 V9GYV3 84 aa11.91□□□□□ -0.5
PHGDH-204ENST00000469443 IGLV10-54A0A075B6I4 117 aa11.9□□□□□ -0.5
PHGDH-204ENST00000469443 SDHAF1A6NFY7 115 aa11.9□□□□□ -0.5
PHGDH-204ENST00000469443 RPL23P62829 140 aaKnown RBP11.9□□□□□ -0.5
PHGDH-204ENST00000469443 SRRM2Q9UQ35 2752 aaKnown RBP11.9□□□□□ -0.51
PHGDH-204ENST00000469443 TRBV6-5A0A0K0K1A5 114 aa11.89□□□□□ -0.51
PHGDH-204ENST00000469443 C9JQL5 133 aa11.89□□□□□ -0.51
PHGDH-204ENST00000469443 PEA15Q15121 130 aa11.89□□□□□ -0.51
PHGDH-204ENST00000469443 NAT8Q9UHE5 227 aa11.89□□□□□ -0.51
PHGDH-204ENST00000469443 APCSP02743 223 aa11.88□□□□□ -0.51
PHGDH-204ENST00000469443 PRSS1P07477 247 aa11.88□□□□□ -0.51
PHGDH-204ENST00000469443 ADIRFQ15847 76 aa11.88□□□□□ -0.51
PHGDH-204ENST00000469443 SMDT1Q9H4I9 107 aa11.88□□□□□ -0.51
PHGDH-204ENST00000469443 PMCHP20382 165 aa11.87□□□□□ -0.51
PHGDH-204ENST00000469443 SRSF3P84103 164 aaKnown RBP11.87□□□□□ -0.51
PHGDH-204ENST00000469443 RIGQ13278 110 aa11.87□□□□□ -0.51
PHGDH-204ENST00000469443 DGAT2L7PQ6IED9 249 aa11.87□□□□□ -0.51
PHGDH-204ENST00000469443 NUP35Q8NFH5 326 aa11.87□□□□□ -0.51
PHGDH-204ENST00000469443 RNF185Q96GF1 192 aa11.87□□□□□ -0.51
PHGDH-204ENST00000469443 H7C423 109 aa11.86□□□□□ -0.51
PHGDH-204ENST00000469443 I3L3M4 83 aa11.86□□□□□ -0.51
PHGDH-204ENST00000469443 GAS8-AS1O95177 125 aa11.86□□□□□ -0.51
PHGDH-204ENST00000469443 RAB4AP20338 218 aa11.86□□□□□ -0.51
PHGDH-204ENST00000469443 AMMECR1LQ6DCA0 310 aa11.86□□□□□ -0.51
PHGDH-204ENST00000469443 SCXQ7RTU7 201 aa11.86□□□□□ -0.51
PHGDH-204ENST00000469443 MRAP2Q96G30 205 aa11.86□□□□□ -0.51
PHGDH-204ENST00000469443 ST20Q9HBF5 79 aa11.86□□□□□ -0.51
PHGDH-204ENST00000469443 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.85□□□□□ -0.51
PHGDH-204ENST00000469443 IGKV2-29A2NJV5 120 aaPredicted RBP11.85□□□□□ -0.51
PHGDH-204ENST00000469443 AMN1Q8IY45 258 aa11.85□□□□□ -0.51
PHGDH-204ENST00000469443 CLRN3Q8NCR9 226 aa11.85□□□□□ -0.51
PHGDH-204ENST00000469443 CHAC1Q9BUX1 264 aa11.85□□□□□ -0.51
PHGDH-204ENST00000469443 NAT8BQ9UHF3 227 aa11.85□□□□□ -0.51
PHGDH-204ENST00000469443 FLG2Q5D862 2391 aaPredicted RBP11.84□□□□□ -0.51
PHGDH-204ENST00000469443 FGF6P10767 208 aa11.84□□□□□ -0.51
PHGDH-204ENST00000469443 RNASEKQ6P5S7 137 aaKnown RBP11.84□□□□□ -0.51
PHGDH-204ENST00000469443 TSHBP01222 138 aa11.83□□□□□ -0.52
PHGDH-204ENST00000469443 RPS10P46783 165 aaKnown RBP11.83□□□□□ -0.52
PHGDH-204ENST00000469443 POLR2KP53803 58 aaKnown RBP11.83□□□□□ -0.52
PHGDH-204ENST00000469443 LINC00528Q8N1L1 170 aa11.83□□□□□ -0.52
PHGDH-204ENST00000469443 C9orf163Q8N9P6 203 aa11.83□□□□□ -0.52
PHGDH-204ENST00000469443 SMIM27A0A1W2PRY6 76 aa11.82□□□□□ -0.52
PHGDH-204ENST00000469443 TMEM242Q9NWH2 141 aa11.82□□□□□ -0.52
PHGDH-204ENST00000469443 IGKV3OR2-268A0A0C4DH90 116 aa11.81□□□□□ -0.52
PHGDH-204ENST00000469443 TRBV27A0A0K0K1C4 114 aa11.81□□□□□ -0.52
PHGDH-204ENST00000469443 PLA2G1BP04054 148 aaKnown RBP11.81□□□□□ -0.52
PHGDH-204ENST00000469443 ESDP10768 282 aa11.81□□□□□ -0.52
PHGDH-204ENST00000469443 ZNF25P17030 456 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-204ENST00000469443 CIRBP-AS1Q8TBR5 109 aa11.81□□□□□ -0.52
PHGDH-204ENST00000469443 hDV102S1A0JD36 115 aa11.8□□□□□ -0.52
PHGDH-204ENST00000469443 GAGE12HA6NDE8 117 aa11.8□□□□□ -0.52
PHGDH-204ENST00000469443 SMKR1H3BMG3 65 aa11.8□□□□□ -0.52
PHGDH-204ENST00000469443 PPP1R17O96001 155 aa11.8□□□□□ -0.52
PHGDH-204ENST00000469443 CNBPP62633 177 aaKnown RBP11.8□□□□□ -0.52
PHGDH-204ENST00000469443 BTF3L4Q96K17 158 aa11.8□□□□□ -0.52
PHGDH-204ENST00000469443 TMEM101Q96IK0 257 aa11.79□□□□□ -0.52
PHGDH-204ENST00000469443 AP5S1Q9NUS5 200 aa11.79□□□□□ -0.52
PHGDH-204ENST00000469443 MYCBP2O75592 4640 aa11.78□□□□□ -0.52
PHGDH-204ENST00000469443 A0A1B0GW15 77 aa11.78□□□□□ -0.52
PHGDH-204ENST00000469443 FAM104BQ5XKR9 115 aa11.78□□□□□ -0.52
PHGDH-204ENST00000469443 NRACQ8N912 160 aa11.78□□□□□ -0.52
PHGDH-204ENST00000469443 OR5A1Q8NGJ0 315 aa11.78□□□□□ -0.52
PHGDH-204ENST00000469443 CHCHD10Q8WYQ3 142 aaPredicted RBP11.78□□□□□ -0.52
PHGDH-204ENST00000469443 DMBT1Q9UGM3 2413 aaPredicted RBP11.78□□□□□ -0.52
PHGDH-204ENST00000469443 VCYO14598 125 aa11.77□□□□□ -0.53
PHGDH-204ENST00000469443 CAMPP49913 170 aa11.77□□□□□ -0.53
PHGDH-204ENST00000469443 SUMO2P61956 95 aaKnown RBP11.77□□□□□ -0.53
PHGDH-204ENST00000469443 CFAP161Q6P656 301 aa11.77□□□□□ -0.53
PHGDH-204ENST00000469443 C7orf77A4D0Y5 90 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms