RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ZZEF1O43149 2961 aa3.59□□□□□ -1.83
SF3B1-207ENST00000468925 IGLV3-9A0A075B6K5 115 aa3.59□□□□□ -1.83
SF3B1-207ENST00000468925 IGHV3OR16-10A0A075B7F0 116 aa3.59□□□□□ -1.83
SF3B1-207ENST00000468925 IGHV1-3A0A0C4DH29 117 aa3.59□□□□□ -1.83
SF3B1-207ENST00000468925 A0A0U1RQV1 116 aa3.59□□□□□ -1.83
SF3B1-207ENST00000468925 OXTP01178 125 aa3.59□□□□□ -1.83
SF3B1-207ENST00000468925 TRGV3P03979 118 aa3.59□□□□□ -1.83
SF3B1-207ENST00000468925 IGHV3-30-3P0DP02 117 aa3.59□□□□□ -1.83
SF3B1-207ENST00000468925 RNASE4P34096 147 aaKnown RBP3.59□□□□□ -1.83
SF3B1-207ENST00000468925 RPL28P46779 137 aaKnown RBP3.59□□□□□ -1.83
SF3B1-207ENST00000468925 TSPEAR-AS2P59090 65 aa3.59□□□□□ -1.83
SF3B1-207ENST00000468925 KLK9Q2XQG4 91 aa3.59□□□□□ -1.83
SF3B1-207ENST00000468925 Q6ZRU5 148 aa3.59□□□□□ -1.83
SF3B1-207ENST00000468925 C9orf139Q6ZV77 190 aa3.59□□□□□ -1.83
SF3B1-207ENST00000468925 C17orf77Q96MU5 243 aa3.59□□□□□ -1.83
SF3B1-207ENST00000468925 BBC3Q96PG8 261 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-207ENST00000468925 LITAFQ99732 161 aa3.59□□□□□ -1.83
SF3B1-207ENST00000468925 NDUFA12Q9UI09 145 aa3.59□□□□□ -1.83
SF3B1-207ENST00000468925 KLK9Q9UKQ9 250 aa3.59□□□□□ -1.83
SF3B1-207ENST00000468925 PKIGQ9Y2B9 76 aa3.59□□□□□ -1.83
SF3B1-207ENST00000468925 DMDP11532 3685 aa3.59□□□□□ -1.84
SF3B1-207ENST00000468925 SPTBN2O15020 2390 aa3.59□□□□□ -1.84
SF3B1-207ENST00000468925 IGHV5-10-1A0A0J9YXX1 117 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 PLAC8L1A1L4L8 177 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 CCL24O00175 119 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 NDUFA1O15239 70 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 NDUFB3O43676 98 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 GAS8-AS1O95177 125 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 TSHBP01222 138 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 IGHV1-2P23083 117 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 MAGEA5P43359 124 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 MRGPRG-AS1Q2M3A8 158 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 BEAN1Q3B7T3 259 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 GPHB5Q86YW7 130 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 C14orf178Q8N769 122 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-207ENST00000468925 CLEC2BQ92478 149 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 LEAP2Q969E1 77 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 EEF1AKMT3Q96AZ1 226 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 UBL5Q9BZL1 73 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 C16orf95Q9H693 158 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 KAAG1Q9UBP8 84 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 MED12Q93074 2177 aa3.58□□□□□ -1.84
SF3B1-207ENST00000468925 SPEGQ15772 3267 aa3.57□□□□□ -1.84
SF3B1-207ENST00000468925 IGLV11-55A0A075B6I3 123 aa3.57□□□□□ -1.84
SF3B1-207ENST00000468925 H7BZZ5 65 aa3.57□□□□□ -1.84
SF3B1-207ENST00000468925 IGHV3-48P01763 117 aa3.57□□□□□ -1.84
SF3B1-207ENST00000468925 MGPP08493 103 aa3.57□□□□□ -1.84
SF3B1-207ENST00000468925 PDE6GP18545 87 aa3.57□□□□□ -1.84
SF3B1-207ENST00000468925 BLCAPP62952 87 aa3.57□□□□□ -1.84
SF3B1-207ENST00000468925 C10orf55Q5SWW7 151 aa3.57□□□□□ -1.84
SF3B1-207ENST00000468925 GFRALQ6UXV0 394 aa3.57□□□□□ -1.84
SF3B1-207ENST00000468925 LINC01561Q8N1V8 128 aa3.57□□□□□ -1.84
SF3B1-207ENST00000468925 C20orf203Q8NBC4 194 aa3.57□□□□□ -1.84
SF3B1-207ENST00000468925 NPBQ8NG41 125 aa3.57□□□□□ -1.84
SF3B1-207ENST00000468925 BRK1Q8WUW1 75 aa3.57□□□□□ -1.84
SF3B1-207ENST00000468925 TTTY12Q9BZ98 90 aa3.57□□□□□ -1.84
SF3B1-207ENST00000468925 ASPMQ8IZT6 3477 aa3.57□□□□□ -1.84
SF3B1-207ENST00000468925 KRTAP29-1A8MX34 341 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-207ENST00000468925 M0R1W7 72 aa3.56□□□□□ -1.84
SF3B1-207ENST00000468925 CCKP06307 115 aa3.56□□□□□ -1.84
SF3B1-207ENST00000468925 RBM3P98179 157 aaKnown RBP3.56□□□□□ -1.84
SF3B1-207ENST00000468925 PRSS33Q8NF86 280 aa3.56□□□□□ -1.84
SF3B1-207ENST00000468925 Q8TAT8 98 aa3.56□□□□□ -1.84
SF3B1-207ENST00000468925 CTSZQ9UBR2 303 aa3.56□□□□□ -1.84
SF3B1-207ENST00000468925 BRWD1Q9NSI6 2320 aa3.56□□□□□ -1.84
SF3B1-207ENST00000468925 PI4KAP42356 2102 aa3.56□□□□□ -1.84
SF3B1-207ENST00000468925 FRYQ5TBA9 3013 aa3.56□□□□□ -1.84
SF3B1-207ENST00000468925 CEP250Q9BV73 2442 aa3.55□□□□□ -1.84
SF3B1-207ENST00000468925 IGLV5-45A0A087WSX0 123 aa3.55□□□□□ -1.84
SF3B1-207ENST00000468925 IBA57-AS1B1ANH7 110 aa3.55□□□□□ -1.84
SF3B1-207ENST00000468925 ZNHIT1O43257 154 aa3.55□□□□□ -1.84
SF3B1-207ENST00000468925 IGHV1-8P0DP01 117 aa3.55□□□□□ -1.84
SF3B1-207ENST00000468925 PIK3CD-AS1Q5SR53 167 aa3.55□□□□□ -1.84
SF3B1-207ENST00000468925 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.55□□□□□ -1.84
SF3B1-207ENST00000468925 Q75L30 129 aa3.55□□□□□ -1.84
SF3B1-207ENST00000468925 C20orf197Q8N268 126 aa3.55□□□□□ -1.84
SF3B1-207ENST00000468925 LINC00308Q8TCZ7 52 aa3.55□□□□□ -1.84
SF3B1-207ENST00000468925 RPL39LQ96EH5 51 aaKnown RBP3.55□□□□□ -1.84
SF3B1-207ENST00000468925 C11orf68Q9H3H3 251 aaKnown RBP3.55□□□□□ -1.84
SF3B1-207ENST00000468925 MOB4Q9Y3A3 225 aa3.55□□□□□ -1.84
SF3B1-207ENST00000468925 SMAD5-AS1Q9Y6J3 95 aa3.55□□□□□ -1.84
SF3B1-207ENST00000468925 KIF25-AS1Q9Y6Z4 181 aa3.55□□□□□ -1.84
SF3B1-207ENST00000468925 CNTRLQ7Z7A1 2325 aa3.55□□□□□ -1.84
SF3B1-207ENST00000468925 FREM1Q5H8C1 2179 aa3.55□□□□□ -1.84
SF3B1-207ENST00000468925 HELZ2Q9BYK8 2649 aaKnown RBP3.55□□□□□ -1.84
SF3B1-207ENST00000468925 USP9XQ93008 2570 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-207ENST00000468925 F5P12259 2224 aa3.54□□□□□ -1.84
SF3B1-207ENST00000468925 IGLV4-3A0A075B6K6 122 aa3.54□□□□□ -1.84
SF3B1-207ENST00000468925 IGHV3-64DA0A0J9YX35 117 aa3.54□□□□□ -1.84
SF3B1-207ENST00000468925 FAM223BA6NKX1 122 aa3.54□□□□□ -1.84
SF3B1-207ENST00000468925 BUB1B-PAK6H3BSN5 160 aa3.54□□□□□ -1.84
SF3B1-207ENST00000468925 TMEM256-PLSCR3K7ERE1 68 aa3.54□□□□□ -1.84
SF3B1-207ENST00000468925 CRPP02741 224 aa3.54□□□□□ -1.84
SF3B1-207ENST00000468925 CXCL6P80162 114 aa3.54□□□□□ -1.84
SF3B1-207ENST00000468925 FAM19A3Q7Z5A8 133 aa3.54□□□□□ -1.84
SF3B1-207ENST00000468925 FAM19A1Q7Z5A9 133 aa3.54□□□□□ -1.84
SF3B1-207ENST00000468925 MRPL55Q7Z7F7 128 aaKnown RBP3.54□□□□□ -1.84
SF3B1-207ENST00000468925 RPP25Q9BUL9 199 aaKnown RBP3.54□□□□□ -1.84
SF3B1-207ENST00000468925 ARRDC1-AS1Q9H2J1 176 aa3.54□□□□□ -1.84
SF3B1-207ENST00000468925 LINC00846Q9NV44 126 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms