RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 HOXD3P31249 432 aaPredicted RBP11.61□□□□□ -0.55
TSPAN4-211ENST00000468468 LYRM7Q5U5X0 104 aa11.61□□□□□ -0.55
TSPAN4-211ENST00000468468 ATP6V0E2Q8NHE4 81 aa11.61□□□□□ -0.55
TSPAN4-211ENST00000468468 VPREB3Q9UKI3 123 aa11.61□□□□□ -0.55
TSPAN4-211ENST00000468468 TENM4Q6N022 2769 aa11.6□□□□□ -0.55
TSPAN4-211ENST00000468468 ZNF22P17026 224 aaPredicted RBP11.6□□□□□ -0.55
TSPAN4-211ENST00000468468 KRTAP1-3Q8IUG1 177 aa11.6□□□□□ -0.55
TSPAN4-211ENST00000468468 VCX2Q9H322 139 aa11.6□□□□□ -0.55
TSPAN4-211ENST00000468468 A0A0J9YXV3 536 aa11.6□□□□□ -0.55
TSPAN4-211ENST00000468468 Q6YL49 198 aa11.6□□□□□ -0.55
TSPAN4-211ENST00000468468 C10orf126Q8N4M7 172 aa11.6□□□□□ -0.55
TSPAN4-211ENST00000468468 IGLV4-3A0A075B6K6 122 aa11.59□□□□□ -0.55
TSPAN4-211ENST00000468468 IGHV3-73A0A0B4J1V6 119 aa11.59□□□□□ -0.55
TSPAN4-211ENST00000468468 RHODO00212 210 aa11.59□□□□□ -0.55
TSPAN4-211ENST00000468468 KNCNA6PVL3 124 aa11.59□□□□□ -0.55
TSPAN4-211ENST00000468468 TCL1BO95988 128 aa11.59□□□□□ -0.55
TSPAN4-211ENST00000468468 RBMY1A1P0DJD3 496 aaKnown RBP11.59□□□□□ -0.55
TSPAN4-211ENST00000468468 RBMY1CP0DJD4 496 aa11.59□□□□□ -0.55
TSPAN4-211ENST00000468468 RBMY1FQ15415 496 aaKnown RBP11.59□□□□□ -0.55
TSPAN4-211ENST00000468468 LRRC75A-AS1Q8N1F1 130 aa11.59□□□□□ -0.55
TSPAN4-211ENST00000468468 PRO1854Q9UHT4 67 aa11.59□□□□□ -0.55
TSPAN4-211ENST00000468468 ELANEP08246 267 aa11.58□□□□□ -0.56
TSPAN4-211ENST00000468468 PRRC2AP48634 2157 aaKnown RBP11.58□□□□□ -0.56
TSPAN4-211ENST00000468468 CHD6Q8TD26 2715 aa11.58□□□□□ -0.56
TSPAN4-211ENST00000468468 RNF152Q8N8N0 203 aa11.58□□□□□ -0.56
TSPAN4-211ENST00000468468 PPDPFLQ8WWR9 84 aa11.58□□□□□ -0.56
TSPAN4-211ENST00000468468 SCGB1C2P0DMR2 95 aa11.57□□□□□ -0.56
TSPAN4-211ENST00000468468 UBE2E2Q96LR5 201 aa11.57□□□□□ -0.56
TSPAN4-211ENST00000468468 A4D1N5 150 aa11.57□□□□□ -0.56
TSPAN4-211ENST00000468468 PROK1P58294 105 aa11.57□□□□□ -0.56
TSPAN4-211ENST00000468468 TRAV2A0A0B4J234 112 aa11.56□□□□□ -0.56
TSPAN4-211ENST00000468468 CITED1Q99966 193 aa11.56□□□□□ -0.56
TSPAN4-211ENST00000468468 ZNF702PQ9H963 129 aa11.56□□□□□ -0.56
TSPAN4-211ENST00000468468 DEFB131AP59861 70 aa11.56□□□□□ -0.56
TSPAN4-211ENST00000468468 TEN1Q86WV5 123 aa11.56□□□□□ -0.56
TSPAN4-211ENST00000468468 CRLF1O75462 422 aa11.56□□□□□ -0.56
TSPAN4-211ENST00000468468 TNFRSF18Q9Y5U5 241 aa11.56□□□□□ -0.56
TSPAN4-211ENST00000468468 TLN2Q9Y4G6 2542 aa11.55□□□□□ -0.56
TSPAN4-211ENST00000468468 TRAV4A0A0B4J268 109 aa11.55□□□□□ -0.56
TSPAN4-211ENST00000468468 PRM2P04554 102 aa11.55□□□□□ -0.56
TSPAN4-211ENST00000468468 CD28P10747 220 aa11.55□□□□□ -0.56
TSPAN4-211ENST00000468468 NDUFV3P56181 108 aaKnown RBP11.55□□□□□ -0.56
TSPAN4-211ENST00000468468 OXLD1Q5BKU9 147 aa11.55□□□□□ -0.56
TSPAN4-211ENST00000468468 MUSTN1Q8IVN3 82 aa11.55□□□□□ -0.56
TSPAN4-211ENST00000468468 RAX2Q96IS3 184 aa11.55□□□□□ -0.56
TSPAN4-211ENST00000468468 GAGE12JA6NER3 117 aa11.55□□□□□ -0.56
TSPAN4-211ENST00000468468 GAGE7O76087 117 aa11.55□□□□□ -0.56
TSPAN4-211ENST00000468468 GAGE12FP0CL80 117 aa11.55□□□□□ -0.56
TSPAN4-211ENST00000468468 GAGE12GP0CL81 117 aa11.55□□□□□ -0.56
TSPAN4-211ENST00000468468 GAGE12IP0CL82 117 aa11.55□□□□□ -0.56
TSPAN4-211ENST00000468468 SLURP1P55000 103 aa11.55□□□□□ -0.56
TSPAN4-211ENST00000468468 GAGE4Q13068 117 aa11.55□□□□□ -0.56
TSPAN4-211ENST00000468468 C3orf56Q8N813 242 aa11.55□□□□□ -0.56
TSPAN4-211ENST00000468468 WFDC11Q8NEX6 87 aa11.55□□□□□ -0.56
TSPAN4-211ENST00000468468 SPXQ9BT56 116 aa11.55□□□□□ -0.56
TSPAN4-211ENST00000468468 ANKRD29Q8N6D5 301 aa11.54□□□□□ -0.56
TSPAN4-211ENST00000468468 DEFB136Q30KP8 78 aa11.54□□□□□ -0.56
TSPAN4-211ENST00000468468 CEMP1Q6PRD7 247 aaPredicted RBP11.54□□□□□ -0.56
TSPAN4-211ENST00000468468 EIF4EBP3O60516 100 aaPredicted RBP11.53□□□□□ -0.56
TSPAN4-211ENST00000468468 C18orf65Q6ZTR6 163 aa11.53□□□□□ -0.56
TSPAN4-211ENST00000468468 DUX3Q96PT4 197 aa11.53□□□□□ -0.56
TSPAN4-211ENST00000468468 EDA2RQ9HAV5 297 aa11.53□□□□□ -0.56
TSPAN4-211ENST00000468468 PYGO1Q9Y3Y4 419 aa11.53□□□□□ -0.56
TSPAN4-211ENST00000468468 TMEM263Q8WUH6 116 aaKnown RBP11.53□□□□□ -0.56
TSPAN4-211ENST00000468468 ITPR3Q14573 2671 aa11.53□□□□□ -0.56
TSPAN4-211ENST00000468468 H7C2G1 150 aa11.52□□□□□ -0.56
TSPAN4-211ENST00000468468 IGHV3-33P01772 117 aa11.52□□□□□ -0.56
TSPAN4-211ENST00000468468 FAM104AQ969W3 186 aa11.52□□□□□ -0.56
TSPAN4-211ENST00000468468 CCDC168Q8NDH2 2452 aa11.52□□□□□ -0.56
TSPAN4-211ENST00000468468 A0A0J9YXY3 114 aa11.52□□□□□ -0.57
TSPAN4-211ENST00000468468 A8MWV9 139 aa11.52□□□□□ -0.57
TSPAN4-211ENST00000468468 H3BMM0 161 aa11.52□□□□□ -0.57
TSPAN4-211ENST00000468468 IGHV3-30-3P0DP02 117 aa11.52□□□□□ -0.57
TSPAN4-211ENST00000468468 RNASE13Q5GAN3 156 aaKnown RBP11.52□□□□□ -0.57
TSPAN4-211ENST00000468468 TIMM21Q9BVV7 248 aa11.52□□□□□ -0.57
TSPAN4-211ENST00000468468 RBMY1BA6NDE4 496 aaKnown RBP11.51□□□□□ -0.57
TSPAN4-211ENST00000468468 RBMY1EA6NEQ0 496 aaKnown RBP11.51□□□□□ -0.57
TSPAN4-211ENST00000468468 ADARB2-AS1A8MUL3 147 aa11.51□□□□□ -0.57
TSPAN4-211ENST00000468468 M0R2P5 195 aa11.51□□□□□ -0.57
TSPAN4-211ENST00000468468 RBMY1DP0C7P1 496 aaKnown RBP11.51□□□□□ -0.57
TSPAN4-211ENST00000468468 SBSPONQ8IVN8 264 aa11.51□□□□□ -0.57
TSPAN4-211ENST00000468468 Q9UF83 564 aa11.51□□□□□ -0.57
TSPAN4-211ENST00000468468 GAGE2BQ13066 116 aa11.51□□□□□ -0.57
TSPAN4-211ENST00000468468 GAGE2EQ4V326 116 aa11.51□□□□□ -0.57
TSPAN4-211ENST00000468468 GAGE2DQ9UEU5 116 aa11.51□□□□□ -0.57
TSPAN4-211ENST00000468468 SONP18583 2426 aaKnown RBP11.51□□□□□ -0.57
TSPAN4-211ENST00000468468 A0A0B4J2C4 111 aa11.5□□□□□ -0.57
TSPAN4-211ENST00000468468 MRPS36P82909 103 aaKnown RBP11.5□□□□□ -0.57
TSPAN4-211ENST00000468468 TRAV8-3A0A0A6YYJ7 113 aa11.5□□□□□ -0.57
TSPAN4-211ENST00000468468 Q6ZSN1 163 aa11.5□□□□□ -0.57
TSPAN4-211ENST00000468468 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.49□□□□□ -0.57
TSPAN4-211ENST00000468468 A8MTW9 85 aa11.49□□□□□ -0.57
TSPAN4-211ENST00000468468 ZNF415Q09FC8 603 aa11.49□□□□□ -0.57
TSPAN4-211ENST00000468468 HIST2H2BDQ6DRA6 164 aa11.49□□□□□ -0.57
TSPAN4-211ENST00000468468 PPDPFQ9H3Y8 114 aa11.49□□□□□ -0.57
TSPAN4-211ENST00000468468 TMEM61Q8N0U2 210 aa11.48□□□□□ -0.57
TSPAN4-211ENST00000468468 Q1RN00 199 aa11.48□□□□□ -0.57
TSPAN4-211ENST00000468468 TTC32Q5I0X7 151 aa11.48□□□□□ -0.57
TSPAN4-211ENST00000468468 CHCHD7Q9BUK0 85 aa11.48□□□□□ -0.57
TSPAN4-211ENST00000468468 SNCGO76070 127 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms