RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 Q9HAA7 133 aa13.39□□□□□ -0.27
NPHP4-206ENST00000468253 GAS8-AS1O95177 125 aa13.38□□□□□ -0.27
NPHP4-206ENST00000468253 RMI2Q96E14 147 aa13.38□□□□□ -0.27
NPHP4-206ENST00000468253 DYNC1H1Q14204 4646 aaKnown RBP13.37□□□□□ -0.27
NPHP4-206ENST00000468253 A0A087WTM6 91 aa13.37□□□□□ -0.27
NPHP4-206ENST00000468253 PSCAO43653 123 aa13.37□□□□□ -0.27
NPHP4-206ENST00000468253 PMCHP20382 165 aa13.37□□□□□ -0.27
NPHP4-206ENST00000468253 RBX1P62877 108 aa13.37□□□□□ -0.27
NPHP4-206ENST00000468253 GAGE6Q13070 117 aa13.37□□□□□ -0.27
NPHP4-206ENST00000468253 MRPL51Q4U2R6 128 aaKnown RBP13.37□□□□□ -0.27
NPHP4-206ENST00000468253 MPV17L2Q567V2 206 aa13.37□□□□□ -0.27
NPHP4-206ENST00000468253 MRPL54Q6P161 138 aaKnown RBP13.37□□□□□ -0.27
NPHP4-206ENST00000468253 TMEM70Q9BUB7 260 aa13.37□□□□□ -0.27
NPHP4-206ENST00000468253 PGPEP1Q9NXJ5 209 aa13.37□□□□□ -0.27
NPHP4-206ENST00000468253 TRBV24-1A0A075B6N3 115 aa13.36□□□□□ -0.27
NPHP4-206ENST00000468253 TRBV27A0A0K0K1C4 114 aa13.36□□□□□ -0.27
NPHP4-206ENST00000468253 H7C423 109 aa13.36□□□□□ -0.27
NPHP4-206ENST00000468253 VCYO14598 125 aa13.36□□□□□ -0.27
NPHP4-206ENST00000468253 AMTP48728 403 aa13.36□□□□□ -0.27
NPHP4-206ENST00000468253 BTF3L4Q96K17 158 aa13.36□□□□□ -0.27
NPHP4-206ENST00000468253 LRCOL1A6NCL2 159 aa13.35□□□□□ -0.27
NPHP4-206ENST00000468253 PPBPP02775 128 aa13.35□□□□□ -0.27
NPHP4-206ENST00000468253 RPS10P46783 165 aaKnown RBP13.35□□□□□ -0.27
NPHP4-206ENST00000468253 NRACQ8N912 160 aa13.35□□□□□ -0.27
NPHP4-206ENST00000468253 UBE2WQ96B02 151 aa13.35□□□□□ -0.27
NPHP4-206ENST00000468253 TMEM242Q9NWH2 141 aa13.35□□□□□ -0.27
NPHP4-206ENST00000468253 ANGP03950 147 aaKnown RBP13.34□□□□□ -0.27
NPHP4-206ENST00000468253 CKS2P33552 79 aa13.34□□□□□ -0.27
NPHP4-206ENST00000468253 ENHOQ6UWT2 76 aa13.34□□□□□ -0.27
NPHP4-206ENST00000468253 SPATA12Q7Z6I5 190 aa13.34□□□□□ -0.27
NPHP4-206ENST00000468253 Q8N976 141 aa13.34□□□□□ -0.27
NPHP4-206ENST00000468253 C20orf78Q9BR46 151 aa13.34□□□□□ -0.27
NPHP4-206ENST00000468253 PRR34Q9NV39 138 aa13.34□□□□□ -0.27
NPHP4-206ENST00000468253 CARHSP1Q9Y2V2 147 aaKnown RBP13.34□□□□□ -0.27
NPHP4-206ENST00000468253 UBE2L6O14933 153 aa13.33□□□□□ -0.28
NPHP4-206ENST00000468253 RPL32P62910 135 aaKnown RBP13.33□□□□□ -0.28
NPHP4-206ENST00000468253 SMKR1H3BMG3 65 aa13.32□□□□□ -0.28
NPHP4-206ENST00000468253 PHOX2AO14813 284 aa13.32□□□□□ -0.28
NPHP4-206ENST00000468253 SUMO2P61956 95 aaKnown RBP13.32□□□□□ -0.28
NPHP4-206ENST00000468253 MIAQ16674 131 aa13.32□□□□□ -0.28
NPHP4-206ENST00000468253 TRAV9-1A0A075B6T8 112 aa13.31□□□□□ -0.28
NPHP4-206ENST00000468253 APCSP02743 223 aa13.31□□□□□ -0.28
NPHP4-206ENST00000468253 ESDP10768 282 aa13.31□□□□□ -0.28
NPHP4-206ENST00000468253 TSHBP01222 138 aa13.3□□□□□ -0.28
NPHP4-206ENST00000468253 CRPP02741 224 aa13.3□□□□□ -0.28
NPHP4-206ENST00000468253 KRTAP10-2P60368 255 aa13.3□□□□□ -0.28
NPHP4-206ENST00000468253 CDPF1Q6NVV7 123 aa13.3□□□□□ -0.28
NPHP4-206ENST00000468253 LINC00269Q8N2A0 174 aa13.3□□□□□ -0.28
NPHP4-206ENST00000468253 C20orf203Q8NBC4 194 aa13.3□□□□□ -0.28
NPHP4-206ENST00000468253 DEFB104AQ8WTQ1 72 aa13.3□□□□□ -0.28
NPHP4-206ENST00000468253 IGKV2D-24A0A075B6R9 120 aa13.29□□□□□ -0.28
NPHP4-206ENST00000468253 C16orf90A8MZG2 172 aa13.29□□□□□ -0.28
NPHP4-206ENST00000468253 IGLV4-60A0A075B6I1 120 aa13.28□□□□□ -0.28
NPHP4-206ENST00000468253 C7orf77A4D0Y5 90 aa13.28□□□□□ -0.28
NPHP4-206ENST00000468253 TCAPO15273 167 aa13.28□□□□□ -0.28
NPHP4-206ENST00000468253 TNFRSF6BO95407 300 aa13.28□□□□□ -0.28
NPHP4-206ENST00000468253 RHEBQ15382 184 aa13.28□□□□□ -0.28
NPHP4-206ENST00000468253 TMEM136Q6ZRR5 245 aa13.28□□□□□ -0.28
NPHP4-206ENST00000468253 ORMDL3Q8N138 153 aa13.28□□□□□ -0.28
NPHP4-206ENST00000468253 MAPKAPK5-AS1Q8N8E1 139 aa13.28□□□□□ -0.28
NPHP4-206ENST00000468253 KIR2DL4Q99706 377 aa13.28□□□□□ -0.28
NPHP4-206ENST00000468253 C1orf43Q9BWL3 253 aa13.28□□□□□ -0.28
NPHP4-206ENST00000468253 TRAV8-4A0A0B4J246 113 aa13.27□□□□□ -0.29
NPHP4-206ENST00000468253 D6R8Y8 96 aa13.27□□□□□ -0.29
NPHP4-206ENST00000468253 CLRN3Q8NCR9 226 aa13.27□□□□□ -0.29
NPHP4-206ENST00000468253 ZNF25P17030 456 aaPredicted RBP13.26□□□□□ -0.29
NPHP4-206ENST00000468253 REG3AQ06141 175 aa13.26□□□□□ -0.29
NPHP4-206ENST00000468253 AMMECR1LQ6DCA0 310 aa13.26□□□□□ -0.29
NPHP4-206ENST00000468253 NTN5Q8WTR8 489 aaPredicted RBP13.26□□□□□ -0.29
NPHP4-206ENST00000468253 LRP1BQ9NZR2 4599 aa13.26□□□□□ -0.29
NPHP4-206ENST00000468253 LAMTOR2Q9Y2Q5 125 aa13.26□□□□□ -0.29
NPHP4-206ENST00000468253 PRSS47A8MTI9 375 aa13.25□□□□□ -0.29
NPHP4-206ENST00000468253 FGF6P10767 208 aa13.25□□□□□ -0.29
NPHP4-206ENST00000468253 S100PP25815 95 aa13.25□□□□□ -0.29
NPHP4-206ENST00000468253 FCER1GP30273 86 aa13.25□□□□□ -0.29
NPHP4-206ENST00000468253 Q8N814 137 aa13.25□□□□□ -0.29
NPHP4-206ENST00000468253 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-206ENST00000468253 IGKV2-29A2NJV5 120 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-206ENST00000468253 MRPL52Q86TS9 123 aaKnown RBP13.24□□□□□ -0.29
NPHP4-206ENST00000468253 PRELID3AQ96N28 172 aa13.24□□□□□ -0.29
NPHP4-206ENST00000468253 DNAH5Q8TE73 4624 aa13.24□□□□□ -0.29
NPHP4-206ENST00000468253 SMAGPQ0VAQ4 97 aa13.23□□□□□ -0.29
NPHP4-206ENST00000468253 BAALCQ8WXS3 180 aa13.23□□□□□ -0.29
NPHP4-206ENST00000468253 NPYP01303 97 aa13.22□□□□□ -0.29
NPHP4-206ENST00000468253 NDUFA5Q16718 116 aa13.22□□□□□ -0.29
NPHP4-206ENST00000468253 RNASEKQ6P5S7 137 aaKnown RBP13.22□□□□□ -0.29
NPHP4-206ENST00000468253 KRTAP26-1Q6PEX3 210 aa13.22□□□□□ -0.29
NPHP4-206ENST00000468253 TMEM101Q96IK0 257 aa13.22□□□□□ -0.29
NPHP4-206ENST00000468253 SMIM2Q9BVW6 85 aa13.22□□□□□ -0.29
NPHP4-206ENST00000468253 RPS10P5Q9NQ39 176 aa13.22□□□□□ -0.29
NPHP4-206ENST00000468253 CSDC2Q9Y534 153 aaKnown RBP13.22□□□□□ -0.29
NPHP4-206ENST00000468253 COX19Q49B96 90 aa13.21□□□□□ -0.29
NPHP4-206ENST00000468253 WFDC2Q14508 124 aa13.2□□□□□ -0.3
NPHP4-206ENST00000468253 SVBPQ8N300 66 aa13.2□□□□□ -0.3
NPHP4-206ENST00000468253 TMEM18Q96B42 140 aa13.2□□□□□ -0.3
NPHP4-206ENST00000468253 GNB1LQ9BYB4 327 aa13.2□□□□□ -0.3
NPHP4-206ENST00000468253 SNAPINO95295 136 aa13.19□□□□□ -0.3
NPHP4-206ENST00000468253 APOC3P02656 99 aa13.19□□□□□ -0.3
NPHP4-206ENST00000468253 C14orf177Q52M58 125 aa13.19□□□□□ -0.3
NPHP4-206ENST00000468253 CLPSL2Q6UWE3 100 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms