RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 ENHOQ6UWT2 76 aa9.66□□□□□ -0.86
COMMD3-206ENST00000468179 A0A1B0GUT8 65 aa9.65□□□□□ -0.86
COMMD3-206ENST00000468179 UBE2L6O14933 153 aa9.65□□□□□ -0.86
COMMD3-206ENST00000468179 LECT2O14960 151 aa9.65□□□□□ -0.86
COMMD3-206ENST00000468179 GATD1Q8NB37 220 aa9.65□□□□□ -0.86
COMMD3-206ENST00000468179 KRTAP17-1Q9BYP8 105 aa9.65□□□□□ -0.86
COMMD3-206ENST00000468179 MRPL18Q9H0U6 180 aaKnown RBP9.65□□□□□ -0.86
COMMD3-206ENST00000468179 A0A1B0GUV1 79 aa9.64□□□□□ -0.87
COMMD3-206ENST00000468179 AMTP48728 403 aa9.64□□□□□ -0.87
COMMD3-206ENST00000468179 XGP55808 180 aa9.64□□□□□ -0.87
COMMD3-206ENST00000468179 PRR34Q9NV39 138 aa9.64□□□□□ -0.87
COMMD3-206ENST00000468179 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.63□□□□□ -0.87
COMMD3-206ENST00000468179 HIGD1CA8MV81 97 aa9.63□□□□□ -0.87
COMMD3-206ENST00000468179 EPM2AB3EWF7 344 aa9.63□□□□□ -0.87
COMMD3-206ENST00000468179 NCR2O95944 276 aa9.63□□□□□ -0.87
COMMD3-206ENST00000468179 WFDC2Q14508 124 aa9.63□□□□□ -0.87
COMMD3-206ENST00000468179 LINC00269Q8N2A0 174 aa9.63□□□□□ -0.87
COMMD3-206ENST00000468179 TRAV8-4A0A0B4J246 113 aa9.62□□□□□ -0.87
COMMD3-206ENST00000468179 TRAV26-2A0A0B4J265 109 aa9.62□□□□□ -0.87
COMMD3-206ENST00000468179 RIGQ13278 110 aa9.62□□□□□ -0.87
COMMD3-206ENST00000468179 NAT8Q9UHE5 227 aa9.62□□□□□ -0.87
COMMD3-206ENST00000468179 REG3AQ06141 175 aa9.61□□□□□ -0.87
COMMD3-206ENST00000468179 ISOC2Q96AB3 205 aa9.61□□□□□ -0.87
COMMD3-206ENST00000468179 KRTAP4-5Q9BYR2 181 aa9.61□□□□□ -0.87
COMMD3-206ENST00000468179 TMEM191AQ9H0A3 160 aa9.61□□□□□ -0.87
COMMD3-206ENST00000468179 RYR1P21817 5038 aa9.61□□□□□ -0.87
COMMD3-206ENST00000468179 H7C423 109 aa9.6□□□□□ -0.87
COMMD3-206ENST00000468179 RPL23P62829 140 aaKnown RBP9.6□□□□□ -0.87
COMMD3-206ENST00000468179 ADIRFQ15847 76 aa9.6□□□□□ -0.87
COMMD3-206ENST00000468179 NAT8BQ9UHF3 227 aa9.6□□□□□ -0.87
COMMD3-206ENST00000468179 V9GYV3 84 aa9.6□□□□□ -0.87
COMMD3-206ENST00000468179 LRP1BQ9NZR2 4599 aa9.6□□□□□ -0.87
COMMD3-206ENST00000468179 TRBV6-5A0A0K0K1A5 114 aa9.59□□□□□ -0.87
COMMD3-206ENST00000468179 SDHAF1A6NFY7 115 aa9.59□□□□□ -0.87
COMMD3-206ENST00000468179 PPP1R17O96001 155 aa9.59□□□□□ -0.87
COMMD3-206ENST00000468179 HLA-DQA1P01909 254 aa9.59□□□□□ -0.87
COMMD3-206ENST00000468179 PMCHP20382 165 aa9.59□□□□□ -0.87
COMMD3-206ENST00000468179 AMMECR1LQ6DCA0 310 aa9.59□□□□□ -0.87
COMMD3-206ENST00000468179 RPL39LQ96EH5 51 aaKnown RBP9.59□□□□□ -0.87
COMMD3-206ENST00000468179 MRAP2Q96G30 205 aa9.59□□□□□ -0.87
COMMD3-206ENST00000468179 I3L3M4 83 aa9.58□□□□□ -0.88
COMMD3-206ENST00000468179 APCSP02743 223 aa9.58□□□□□ -0.88
COMMD3-206ENST00000468179 CLPSL2Q6UWE3 100 aa9.58□□□□□ -0.88
COMMD3-206ENST00000468179 C20orf203Q8NBC4 194 aa9.58□□□□□ -0.88
COMMD3-206ENST00000468179 ST20Q9HBF5 79 aa9.58□□□□□ -0.88
COMMD3-206ENST00000468179 A0A1B0GW15 77 aa9.57□□□□□ -0.88
COMMD3-206ENST00000468179 USP17L23D6RBM5 183 aa9.57□□□□□ -0.88
COMMD3-206ENST00000468179 RAB14P61106 215 aa9.57□□□□□ -0.88
COMMD3-206ENST00000468179 CLRN3Q8NCR9 226 aa9.57□□□□□ -0.88
COMMD3-206ENST00000468179 NUP35Q8NFH5 326 aa9.57□□□□□ -0.88
COMMD3-206ENST00000468179 IGLV4-60A0A075B6I1 120 aa9.56□□□□□ -0.88
COMMD3-206ENST00000468179 C9JQL5 133 aa9.56□□□□□ -0.88
COMMD3-206ENST00000468179 RAB4AP20338 218 aa9.56□□□□□ -0.88
COMMD3-206ENST00000468179 DGAT2L7PQ6IED9 249 aa9.56□□□□□ -0.88
COMMD3-206ENST00000468179 DEFB104AQ8WTQ1 72 aa9.56□□□□□ -0.88
COMMD3-206ENST00000468179 ZNF25P17030 456 aaPredicted RBP9.56□□□□□ -0.88
COMMD3-206ENST00000468179 SRSF3P84103 164 aaKnown RBP9.56□□□□□ -0.88
COMMD3-206ENST00000468179 Q5VSD8 79 aa9.56□□□□□ -0.88
COMMD3-206ENST00000468179 Q6ZSA8 131 aa9.56□□□□□ -0.88
COMMD3-206ENST00000468179 BTF3L4Q96K17 158 aa9.56□□□□□ -0.88
COMMD3-206ENST00000468179 IGLV10-54A0A075B6I4 117 aa9.55□□□□□ -0.88
COMMD3-206ENST00000468179 SMIM27A0A1W2PRY6 76 aa9.55□□□□□ -0.88
COMMD3-206ENST00000468179 S100A8P05109 93 aa9.55□□□□□ -0.88
COMMD3-206ENST00000468179 RNASEKQ6P5S7 137 aaKnown RBP9.55□□□□□ -0.88
COMMD3-206ENST00000468179 AMN1Q8IY45 258 aa9.55□□□□□ -0.88
COMMD3-206ENST00000468179 RNF185Q96GF1 192 aa9.55□□□□□ -0.88
COMMD3-206ENST00000468179 TMEM101Q96IK0 257 aa9.55□□□□□ -0.88
COMMD3-206ENST00000468179 FAM30AQ9NZY2 134 aa9.55□□□□□ -0.88
COMMD3-206ENST00000468179 DNAH5Q8TE73 4624 aa9.54□□□□□ -0.88
COMMD3-206ENST00000468179 SMR3BP02814 79 aaPredicted RBP9.54□□□□□ -0.88
COMMD3-206ENST00000468179 KRTAP26-1Q6PEX3 210 aa9.54□□□□□ -0.88
COMMD3-206ENST00000468179 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.53□□□□□ -0.88
COMMD3-206ENST00000468179 TRBV27A0A0K0K1C4 114 aa9.53□□□□□ -0.88
COMMD3-206ENST00000468179 IGKV2-29A2NJV5 120 aaPredicted RBP9.53□□□□□ -0.88
COMMD3-206ENST00000468179 VCYO14598 125 aa9.53□□□□□ -0.88
COMMD3-206ENST00000468179 PPP1R2P9O14990 202 aa9.53□□□□□ -0.88
COMMD3-206ENST00000468179 FGF6P10767 208 aa9.53□□□□□ -0.88
COMMD3-206ENST00000468179 SMAGPQ0VAQ4 97 aa9.53□□□□□ -0.88
COMMD3-206ENST00000468179 CFAP161Q6P656 301 aa9.53□□□□□ -0.88
COMMD3-206ENST00000468179 HSPG2P98160 4391 aa9.53□□□□□ -0.88
COMMD3-206ENST00000468179 LINC00862A6NCI5 91 aa9.52□□□□□ -0.89
COMMD3-206ENST00000468179 F8W036 122 aa9.52□□□□□ -0.89
COMMD3-206ENST00000468179 PRSS1P07477 247 aa9.52□□□□□ -0.89
COMMD3-206ENST00000468179 INAFM2P0DMQ5 153 aa9.52□□□□□ -0.89
COMMD3-206ENST00000468179 FCER1GP30273 86 aa9.52□□□□□ -0.89
COMMD3-206ENST00000468179 POLR2KP53803 58 aaKnown RBP9.52□□□□□ -0.89
COMMD3-206ENST00000468179 FAM104BQ5XKR9 115 aa9.52□□□□□ -0.89
COMMD3-206ENST00000468179 AP5S1Q9NUS5 200 aa9.52□□□□□ -0.89
COMMD3-206ENST00000468179 PCLOQ9Y6V0 5065 aa9.52□□□□□ -0.89
COMMD3-206ENST00000468179 TSHBP01222 138 aa9.51□□□□□ -0.89
COMMD3-206ENST00000468179 CAMPP49913 170 aa9.51□□□□□ -0.89
COMMD3-206ENST00000468179 HAMPP81172 84 aa9.51□□□□□ -0.89
COMMD3-206ENST00000468179 LINC01620Q4KN68 170 aa9.51□□□□□ -0.89
COMMD3-206ENST00000468179 OR5A1Q8NGJ0 315 aa9.51□□□□□ -0.89
COMMD3-206ENST00000468179 KIR2DL4Q99706 377 aa9.51□□□□□ -0.89
COMMD3-206ENST00000468179 KRTAP9-2Q9BYQ4 174 aa9.51□□□□□ -0.89
COMMD3-206ENST00000468179 TMEM242Q9NWH2 141 aa9.51□□□□□ -0.89
COMMD3-206ENST00000468179 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.5□□□□□ -0.89
COMMD3-206ENST00000468179 IGKV3OR2-268A0A0C4DH90 116 aa9.5□□□□□ -0.89
COMMD3-206ENST00000468179 hDV102S1A0JD36 115 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms