RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 GAGE12IP0CL82 117 aa7.28□□□□□ -1.24
MSH5-213ENST00000468136 P0DMU3 169 aa7.28□□□□□ -1.24
MSH5-213ENST00000468136 FAM231AP0DMU4 169 aa7.28□□□□□ -1.24
MSH5-213ENST00000468136 FAM231CP0DMU5 169 aa7.28□□□□□ -1.24
MSH5-213ENST00000468136 MRPS36P82909 103 aaKnown RBP7.28□□□□□ -1.24
MSH5-213ENST00000468136 NEGR1Q7Z3B1 354 aa7.28□□□□□ -1.24
MSH5-213ENST00000468136 BOD1L2Q8IYS8 172 aa7.28□□□□□ -1.24
MSH5-213ENST00000468136 C2orf88Q9BSF0 95 aa7.28□□□□□ -1.24
MSH5-213ENST00000468136 VCX2Q9H322 139 aa7.28□□□□□ -1.24
MSH5-213ENST00000468136 CST9LQ9H4G1 147 aa7.28□□□□□ -1.24
MSH5-213ENST00000468136 HHLA3Q9XRX5 114 aa7.28□□□□□ -1.24
MSH5-213ENST00000468136 CSDC2Q9Y534 153 aaKnown RBP7.28□□□□□ -1.24
MSH5-213ENST00000468136 X6R8D5 127 aa7.28□□□□□ -1.24
MSH5-213ENST00000468136 CUBNO60494 3623 aa7.28□□□□□ -1.24
MSH5-213ENST00000468136 JMJD1CQ15652 2540 aa7.27□□□□□ -1.25
MSH5-213ENST00000468136 UBE2D3P61077 147 aa7.27□□□□□ -1.25
MSH5-213ENST00000468136 UBE2D2P62837 147 aa7.27□□□□□ -1.25
MSH5-213ENST00000468136 MAJINQ3KP22 176 aa7.27□□□□□ -1.25
MSH5-213ENST00000468136 ZC2HC1BQ5TFG8 222 aa7.27□□□□□ -1.25
MSH5-213ENST00000468136 Q6ZSN1 163 aa7.27□□□□□ -1.25
MSH5-213ENST00000468136 ZNRF2Q8NHG8 242 aa7.27□□□□□ -1.25
MSH5-213ENST00000468136 RNF183Q96D59 192 aa7.27□□□□□ -1.25
MSH5-213ENST00000468136 IGHV4-30-4P0DP06 118 aa7.26□□□□□ -1.25
MSH5-213ENST00000468136 SEC11AP67812 179 aa7.26□□□□□ -1.25
MSH5-213ENST00000468136 CTAG1AP78358 180 aa7.26□□□□□ -1.25
MSH5-213ENST00000468136 NFE4Q86UQ8 179 aa7.26□□□□□ -1.25
MSH5-213ENST00000468136 SLC25A29Q8N8R3 303 aa7.26□□□□□ -1.25
MSH5-213ENST00000468136 HIGD1BQ9P298 99 aa7.26□□□□□ -1.25
MSH5-213ENST00000468136 NOTCH3Q9UM47 2321 aa7.26□□□□□ -1.25
MSH5-213ENST00000468136 NACAE9PAV3 2078 aa7.25□□□□□ -1.25
MSH5-213ENST00000468136 C11orf86A6NJI1 115 aa7.25□□□□□ -1.25
MSH5-213ENST00000468136 E9PLD3 99 aa7.25□□□□□ -1.25
MSH5-213ENST00000468136 RPL39P62891 51 aaKnown RBP7.25□□□□□ -1.25
MSH5-213ENST00000468136 FHL2Q14192 279 aa7.25□□□□□ -1.25
MSH5-213ENST00000468136 ANKRD39Q53RE8 183 aa7.25□□□□□ -1.25
MSH5-213ENST00000468136 PRIMA1Q86XR5 153 aa7.25□□□□□ -1.25
MSH5-213ENST00000468136 STPG4Q8N801 248 aa7.25□□□□□ -1.25
MSH5-213ENST00000468136 OR11H2Q8NH07 326 aa7.25□□□□□ -1.25
MSH5-213ENST00000468136 AMELXQ99217 191 aa7.25□□□□□ -1.25
MSH5-213ENST00000468136 CHCHD7Q9BUK0 85 aa7.25□□□□□ -1.25
MSH5-213ENST00000468136 PRO0255Q9UI72 69 aa7.25□□□□□ -1.25
MSH5-213ENST00000468136 IGLV4-3A0A075B6K6 122 aa7.24□□□□□ -1.25
MSH5-213ENST00000468136 SPART-AS1P0CW21 52 aa7.24□□□□□ -1.25
MSH5-213ENST00000468136 ZNF25P17030 456 aaPredicted RBP7.24□□□□□ -1.25
MSH5-213ENST00000468136 COL5A1-AS1Q5SY13 56 aa7.24□□□□□ -1.25
MSH5-213ENST00000468136 DGAT2L7PQ6IED9 249 aa7.24□□□□□ -1.25
MSH5-213ENST00000468136 SH2D6Q7Z4S9 175 aa7.24□□□□□ -1.25
MSH5-213ENST00000468136 SPATA3Q8NHX4 192 aa7.24□□□□□ -1.25
MSH5-213ENST00000468136 UBE2D4Q9Y2X8 147 aa7.24□□□□□ -1.25
MSH5-213ENST00000468136 BAHCC1Q9P281 2608 aa7.24□□□□□ -1.25
MSH5-213ENST00000468136 TRBV25-1A0A075B6N4 114 aa7.23□□□□□ -1.25
MSH5-213ENST00000468136 FGF6P10767 208 aa7.23□□□□□ -1.25
MSH5-213ENST00000468136 NMUP48645 174 aa7.23□□□□□ -1.25
MSH5-213ENST00000468136 DEFB135Q30KP9 77 aa7.23□□□□□ -1.25
MSH5-213ENST00000468136 TMEM243Q9BU79 118 aa7.23□□□□□ -1.25
MSH5-213ENST00000468136 SNHG12Q9BXW3 62 aa7.23□□□□□ -1.25
MSH5-213ENST00000468136 TEP1Q99973 2627 aaKnown RBP7.23□□□□□ -1.25
MSH5-213ENST00000468136 IGLV4-69A0A075B6H9 119 aa7.22□□□□□ -1.25
MSH5-213ENST00000468136 GAGE12JA6NER3 117 aa7.22□□□□□ -1.25
MSH5-213ENST00000468136 UBE2L6O14933 153 aa7.22□□□□□ -1.25
MSH5-213ENST00000468136 LINC00694P0DN24 101 aa7.22□□□□□ -1.25
MSH5-213ENST00000468136 EMP1P54849 157 aa7.22□□□□□ -1.25
MSH5-213ENST00000468136 HSD52Q0P140 79 aa7.22□□□□□ -1.25
MSH5-213ENST00000468136 GAGE1Q13065 139 aa7.22□□□□□ -1.25
MSH5-213ENST00000468136 GAGE4Q13068 117 aa7.22□□□□□ -1.25
MSH5-213ENST00000468136 GAGE5Q13069 117 aa7.22□□□□□ -1.25
MSH5-213ENST00000468136 TAL2Q16559 108 aa7.22□□□□□ -1.25
MSH5-213ENST00000468136 GAGE13Q4V321 117 aa7.22□□□□□ -1.25
MSH5-213ENST00000468136 FAM222AQ5U5X8 452 aa7.22□□□□□ -1.25
MSH5-213ENST00000468136 Q8NAQ8 132 aa7.22□□□□□ -1.25
MSH5-213ENST00000468136 TMEM101Q96IK0 257 aa7.22□□□□□ -1.25
MSH5-213ENST00000468136 ATRQ13535 2644 aa7.22□□□□□ -1.25
MSH5-213ENST00000468136 TRAV26-1A0A087WT03 109 aa7.21□□□□□ -1.26
MSH5-213ENST00000468136 IGHV4-28A0A0C4DH34 117 aa7.21□□□□□ -1.26
MSH5-213ENST00000468136 TINCRA0A1B0GVN0 87 aa7.21□□□□□ -1.26
MSH5-213ENST00000468136 ATP5G1P05496 136 aa7.21□□□□□ -1.26
MSH5-213ENST00000468136 DEFB130BP0DP73 79 aa7.21□□□□□ -1.26
MSH5-213ENST00000468136 DEFB130AP0DP74 79 aa7.21□□□□□ -1.26
MSH5-213ENST00000468136 TIRAPP58753 221 aa7.21□□□□□ -1.26
MSH5-213ENST00000468136 DAD1P61803 113 aa7.21□□□□□ -1.26
MSH5-213ENST00000468136 OXLD1Q5BKU9 147 aa7.21□□□□□ -1.26
MSH5-213ENST00000468136 FAM19A3Q7Z5A8 133 aa7.21□□□□□ -1.26
MSH5-213ENST00000468136 PHLDA1Q8WV24 401 aaPredicted RBP7.21□□□□□ -1.26
MSH5-213ENST00000468136 PLEKHB2Q96CS7 222 aa7.21□□□□□ -1.26
MSH5-213ENST00000468136 H3BRM9 83 aa7.2□□□□□ -1.26
MSH5-213ENST00000468136 SAMD5Q5TGI4 173 aa7.2□□□□□ -1.26
MSH5-213ENST00000468136 SBSPONQ8IVN8 264 aa7.2□□□□□ -1.26
MSH5-213ENST00000468136 OR5A1Q8NGJ0 315 aa7.2□□□□□ -1.26
MSH5-213ENST00000468136 CHAC1Q9BUX1 264 aa7.2□□□□□ -1.26
MSH5-213ENST00000468136 C11orf68Q9H3H3 251 aaKnown RBP7.2□□□□□ -1.26
MSH5-213ENST00000468136 TRBV6-8A0A0A6YYG3 113 aa7.19□□□□□ -1.26
MSH5-213ENST00000468136 IGHV3-38A0A0C4DH36 116 aa7.19□□□□□ -1.26
MSH5-213ENST00000468136 MYMXA0A1B0GTQ4 84 aa7.19□□□□□ -1.26
MSH5-213ENST00000468136 EREGO14944 169 aa7.19□□□□□ -1.26
MSH5-213ENST00000468136 PAX4O43316 350 aa7.19□□□□□ -1.26
MSH5-213ENST00000468136 HERVK_113P63121 156 aa7.19□□□□□ -1.26
MSH5-213ENST00000468136 TMEM170BQ5T4T1 132 aa7.19□□□□□ -1.26
MSH5-213ENST00000468136 AMMECR1LQ6DCA0 310 aa7.19□□□□□ -1.26
MSH5-213ENST00000468136 C2orf91Q6ZV80 131 aa7.19□□□□□ -1.26
MSH5-213ENST00000468136 ATP6V0E2Q8NHE4 81 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms