RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 CLLU1Q5K131 121 aa-1.64□□□□□ -2.67
RBM39-226ENST00000468086 TMEM35BQ8NCS4 154 aa-1.64□□□□□ -2.67
RBM39-226ENST00000468086 NDUFA12Q9UI09 145 aa-1.64□□□□□ -2.67
RBM39-226ENST00000468086 CUBNO60494 3623 aa-1.65□□□□□ -2.67
RBM39-226ENST00000468086 CLPSL1A2RUU4 121 aa-1.65□□□□□ -2.67
RBM39-226ENST00000468086 I3L2K1 104 aa-1.65□□□□□ -2.67
RBM39-226ENST00000468086 SPINK4O60575 86 aa-1.65□□□□□ -2.67
RBM39-226ENST00000468086 MT-ND4LP03901 98 aa-1.65□□□□□ -2.67
RBM39-226ENST00000468086 TMEM244Q5VVB8 128 aa-1.65□□□□□ -2.67
RBM39-226ENST00000468086 PCBD2Q9H0N5 130 aa-1.65□□□□□ -2.67
RBM39-226ENST00000468086 TEX15Q9BXT5 2789 aa-1.66□□□□□ -2.67
RBM39-226ENST00000468086 COX6B1P14854 86 aa-1.66□□□□□ -2.68
RBM39-226ENST00000468086 LINC01545Q5VT33 79 aa-1.66□□□□□ -2.68
RBM39-226ENST00000468086 TOMM20LQ6UXN7 152 aa-1.66□□□□□ -2.68
RBM39-226ENST00000468086 BANF2Q9H503 90 aa-1.66□□□□□ -2.68
RBM39-226ENST00000468086 RPRMQ9NS64 109 aa-1.66□□□□□ -2.68
RBM39-226ENST00000468086 MGAM2Q2M2H8 2515 aa-1.66□□□□□ -2.68
RBM39-226ENST00000468086 NRXN2Q9P2S2 1712 aa-1.66□□□□□ -2.68
RBM39-226ENST00000468086 ANKRD11Q6UB99 2663 aaPredicted RBP-1.66□□□□□ -2.68
RBM39-226ENST00000468086 KDM5CP41229 1560 aa-1.67□□□□□ -2.68
RBM39-226ENST00000468086 E5RI56 91 aa-1.67□□□□□ -2.68
RBM39-226ENST00000468086 UBE2D1P51668 147 aa-1.67□□□□□ -2.68
RBM39-226ENST00000468086 C9orf116Q5BN46 136 aaPredicted RBP-1.67□□□□□ -2.68
RBM39-226ENST00000468086 OR8I2Q8N0Y5 310 aa-1.67□□□□□ -2.68
RBM39-226ENST00000468086 VPS13DQ5THJ4 4388 aa-1.68□□□□□ -2.68
RBM39-226ENST00000468086 A6NIN4 97 aa-1.68□□□□□ -2.68
RBM39-226ENST00000468086 DEFB135Q30KP9 77 aa-1.68□□□□□ -2.68
RBM39-226ENST00000468086 TMEM128Q5BJH2 165 aa-1.68□□□□□ -2.68
RBM39-226ENST00000468086 MAGOHBQ96A72 148 aaKnown RBP-1.68□□□□□ -2.68
RBM39-226ENST00000468086 SPG11Q96JI7 2443 aa-1.68□□□□□ -2.68
RBM39-226ENST00000468086 ITPR1Q14643 2758 aa-1.69□□□□□ -2.68
RBM39-226ENST00000468086 RPS28P62857 69 aaKnown RBP-1.69□□□□□ -2.68
RBM39-226ENST00000468086 RPL7L1Q6DKI1 246 aaKnown RBP-1.69□□□□□ -2.68
RBM39-226ENST00000468086 PPP1R2P3Q6NXS1 205 aa-1.69□□□□□ -2.68
RBM39-226ENST00000468086 C10orf82Q8WW14 230 aa-1.69□□□□□ -2.68
RBM39-226ENST00000468086 LSM2Q9Y333 95 aaKnown RBP-1.69□□□□□ -2.68
RBM39-226ENST00000468086 TSC2P49815 1807 aa-1.69□□□□□ -2.68
RBM39-226ENST00000468086 ERCC6L2Q5T890 1561 aa-1.69□□□□□ -2.68
RBM39-226ENST00000468086 HTTP42858 3142 aa-1.7□□□□□ -2.68
RBM39-226ENST00000468086 OVOS2A0A0G2JMS6 1433 aa-1.7□□□□□ -2.68
RBM39-226ENST00000468086 H0YJX3 145 aa-1.7□□□□□ -2.68
RBM39-226ENST00000468086 IFNA17P01571 189 aa-1.7□□□□□ -2.68
RBM39-226ENST00000468086 DEFB112Q30KQ8 113 aa-1.7□□□□□ -2.68
RBM39-226ENST00000468086 SPANXN1Q5VSR9 72 aa-1.7□□□□□ -2.68
RBM39-226ENST00000468086 SAMD13Q5VXD3 122 aa-1.7□□□□□ -2.68
RBM39-226ENST00000468086 SDF2Q99470 211 aa-1.7□□□□□ -2.68
RBM39-226ENST00000468086 PKD1P98161 4303 aa-1.7□□□□□ -2.68
RBM39-226ENST00000468086 VPS13BQ7Z7G8 4022 aa-1.7□□□□□ -2.68
RBM39-226ENST00000468086 SMIM4Q8WVI0 70 aa-1.71□□□□□ -2.68
RBM39-226ENST00000468086 ANK3Q12955 4377 aaKnown RBP-1.71□□□□□ -2.68
RBM39-226ENST00000468086 MTORP42345 2549 aa-1.72□□□□□ -2.68
RBM39-226ENST00000468086 AKAP9Q99996 3911 aa-1.72□□□□□ -2.68
RBM39-226ENST00000468086 PIRTP0C851 137 aa-1.72□□□□□ -2.68
RBM39-226ENST00000468086 UBE2G1P62253 170 aa-1.72□□□□□ -2.68
RBM39-226ENST00000468086 MT1HP80294 61 aa-1.72□□□□□ -2.68
RBM39-226ENST00000468086 ZNF818PQ6ZRF7 136 aa-1.72□□□□□ -2.68
RBM39-226ENST00000468086 VSTM2AQ8TAG5 236 aa-1.72□□□□□ -2.68
RBM39-226ENST00000468086 FXYD6Q9H0Q3 95 aa-1.72□□□□□ -2.68
RBM39-226ENST00000468086 WDR7Q9Y4E6 1490 aa-1.72□□□□□ -2.68
RBM39-226ENST00000468086 PLXNB2O15031 1838 aa-1.73□□□□□ -2.69
RBM39-226ENST00000468086 WNK3Q9BYP7 1800 aa-1.73□□□□□ -2.69
RBM39-226ENST00000468086 RIF1Q5UIP0 2472 aaKnown RBP-1.73□□□□□ -2.69
RBM39-226ENST00000468086 LRP6O75581 1613 aa-1.73□□□□□ -2.69
RBM39-226ENST00000468086 G0S2P27469 103 aa-1.73□□□□□ -2.69
RBM39-226ENST00000468086 TRBV20-1A0A075B6N2 111 aa-1.74□□□□□ -2.69
RBM39-226ENST00000468086 SCTP09683 121 aa-1.74□□□□□ -2.69
RBM39-226ENST00000468086 TCTE3Q8IZS6 198 aa-1.74□□□□□ -2.69
RBM39-226ENST00000468086 SAR1AQ9NR31 198 aa-1.74□□□□□ -2.69
RBM39-226ENST00000468086 LINC00312Q9Y6C7 94 aa-1.74□□□□□ -2.69
RBM39-226ENST00000468086 R4GMQ9 66 aa-1.74□□□□□ -2.69
RBM39-226ENST00000468086 IFT172Q9UG01 1749 aa-1.74□□□□□ -2.69
RBM39-226ENST00000468086 ERCC6Q03468 1493 aa-1.75□□□□□ -2.69
RBM39-226ENST00000468086 PARP14Q460N5 1801 aa-1.75□□□□□ -2.69
RBM39-226ENST00000468086 ARFGEF1Q9Y6D6 1849 aa-1.75□□□□□ -2.69
RBM39-226ENST00000468086 TNFSF15O95150 251 aa-1.75□□□□□ -2.69
RBM39-226ENST00000468086 CMPK1P30085 196 aa-1.75□□□□□ -2.69
RBM39-226ENST00000468086 CCL18P55774 89 aa-1.75□□□□□ -2.69
RBM39-226ENST00000468086 AGPAT4-IT1Q9H0P7 198 aa-1.75□□□□□ -2.69
RBM39-226ENST00000468086 SIPA1L3O60292 1781 aaPredicted RBP-1.75□□□□□ -2.69
RBM39-226ENST00000468086 KDM3BQ7LBC6 1761 aa-1.75□□□□□ -2.69
RBM39-226ENST00000468086 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.75□□□□□ -2.691e-20■■■■□ 26
RBM39-226ENST00000468086 DNAJC13O75165 2243 aa-1.76□□□□□ -2.69
RBM39-226ENST00000468086 M0R135 149 aa-1.76□□□□□ -2.69
RBM39-226ENST00000468086 S100GP29377 79 aa-1.76□□□□□ -2.69
RBM39-226ENST00000468086 GNG10P50151 68 aa-1.76□□□□□ -2.69
RBM39-226ENST00000468086 LINC00472Q9H8W2 130 aa-1.76□□□□□ -2.69
RBM39-226ENST00000468086 GCN1Q92616 2671 aaKnown RBP-1.76□□□□□ -2.69
RBM39-226ENST00000468086 TRAV36DV7A0A075B6V5 113 aa-1.77□□□□□ -2.69
RBM39-226ENST00000468086 NCS1P62166 190 aa-1.77□□□□□ -2.69
RBM39-226ENST00000468086 TFAMQ00059 246 aaKnown RBP-1.77□□□□□ -2.69
RBM39-226ENST00000468086 MIC13Q5XKP0 118 aa-1.77□□□□□ -2.69
RBM39-226ENST00000468086 SPTSSBQ8NFR3 76 aa-1.77□□□□□ -2.69
RBM39-226ENST00000468086 HIGD1AQ9Y241 93 aa-1.77□□□□□ -2.69
RBM39-226ENST00000468086 GOLGA4Q13439 2230 aaKnown RBP-1.77□□□□□ -2.69
RBM39-226ENST00000468086 CCDC168Q8NDH2 2452 aa-1.77□□□□□ -2.69
RBM39-226ENST00000468086 ITPR2Q14571 2701 aa-1.77□□□□□ -2.69
RBM39-226ENST00000468086 CTXND1A0A1B0GTU2 59 aa-1.78□□□□□ -2.69
RBM39-226ENST00000468086 PPP1R17O96001 155 aa-1.78□□□□□ -2.69
RBM39-226ENST00000468086 SKA2Q8WVK7 121 aaPredicted RBP-1.78□□□□□ -2.69
RBM39-226ENST00000468086 SMPXQ9UHP9 88 aa-1.78□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 194 ms