RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 Q6ZN92 141 aa13.31□□□□□ -0.28
CHRNA4-203ENST00000467563 C20orf203Q8NBC4 194 aa13.31□□□□□ -0.28
CHRNA4-203ENST00000467563 TRGV4A0A0C4DH28 118 aa13.3□□□□□ -0.28
CHRNA4-203ENST00000467563 MIFP14174 115 aa13.3□□□□□ -0.28
CHRNA4-203ENST00000467563 BAALCQ8WXS3 180 aa13.3□□□□□ -0.28
CHRNA4-203ENST00000467563 TRBV6-4A0A1B0GX49 114 aa13.29□□□□□ -0.28
CHRNA4-203ENST00000467563 LINC01549A6NIU2 74 aa13.29□□□□□ -0.28
CHRNA4-203ENST00000467563 LYRM9A8MSI8 78 aa13.28□□□□□ -0.28
CHRNA4-203ENST00000467563 RPL36AP83881 106 aaKnown RBP13.28□□□□□ -0.28
CHRNA4-203ENST00000467563 RPL36ALQ969Q0 106 aaKnown RBP13.28□□□□□ -0.28
CHRNA4-203ENST00000467563 A0A087WX48 190 aa13.28□□□□□ -0.28
CHRNA4-203ENST00000467563 LOC100131303A0A0U1RQF7 123 aa13.28□□□□□ -0.28
CHRNA4-203ENST00000467563 GAGE12JA6NER3 117 aa13.28□□□□□ -0.28
CHRNA4-203ENST00000467563 GAGE1Q13065 139 aa13.28□□□□□ -0.28
CHRNA4-203ENST00000467563 GAGE4Q13068 117 aa13.28□□□□□ -0.28
CHRNA4-203ENST00000467563 GAGE5Q13069 117 aa13.28□□□□□ -0.28
CHRNA4-203ENST00000467563 GAGE13Q4V321 117 aa13.28□□□□□ -0.28
CHRNA4-203ENST00000467563 MRPL35Q9NZE8 188 aaKnown RBP13.28□□□□□ -0.28
CHRNA4-203ENST00000467563 TRAV12-1A0A0B4J245 112 aa13.27□□□□□ -0.28
CHRNA4-203ENST00000467563 TIMM17AQ99595 171 aa13.27□□□□□ -0.28
CHRNA4-203ENST00000467563 CHCHD7Q9BUK0 85 aa13.27□□□□□ -0.28
CHRNA4-203ENST00000467563 NBEAL1Q6ZS30 2694 aa13.27□□□□□ -0.29
CHRNA4-203ENST00000467563 IGLC3P0DOY3 106 aa13.27□□□□□ -0.29
CHRNA4-203ENST00000467563 UBE2D3P61077 147 aa13.27□□□□□ -0.29
CHRNA4-203ENST00000467563 UBE2D2P62837 147 aa13.27□□□□□ -0.29
CHRNA4-203ENST00000467563 COTL1Q14019 142 aa13.27□□□□□ -0.29
CHRNA4-203ENST00000467563 HSBP1L1C9JCN9 74 aa13.26□□□□□ -0.29
CHRNA4-203ENST00000467563 TMEM141Q96I45 108 aa13.26□□□□□ -0.29
CHRNA4-203ENST00000467563 CELA1Q9UNI1 258 aa13.26□□□□□ -0.29
CHRNA4-203ENST00000467563 ZC2HC1BQ5TFG8 222 aa13.25□□□□□ -0.29
CHRNA4-203ENST00000467563 C14orf144Q96I85 54 aa13.25□□□□□ -0.29
CHRNA4-203ENST00000467563 MIEN1Q9BRT3 115 aa13.25□□□□□ -0.29
CHRNA4-203ENST00000467563 PRSS29PA6NIE9 313 aa13.25□□□□□ -0.29
CHRNA4-203ENST00000467563 STPG4Q8N801 248 aa13.25□□□□□ -0.29
CHRNA4-203ENST00000467563 OPRPNQ99935 248 aaPredicted RBP13.25□□□□□ -0.29
CHRNA4-203ENST00000467563 RETNQ9HD89 108 aa13.25□□□□□ -0.29
CHRNA4-203ENST00000467563 DPM2O94777 84 aa13.24□□□□□ -0.29
CHRNA4-203ENST00000467563 IGKCP01834 107 aa13.24□□□□□ -0.29
CHRNA4-203ENST00000467563 DAZ4Q86SG3 579 aaKnown RBP13.24□□□□□ -0.29
CHRNA4-203ENST00000467563 DAZ3Q9NR90 486 aaKnown RBP13.24□□□□□ -0.29
CHRNA4-203ENST00000467563 HHLA3Q9XRX5 114 aa13.24□□□□□ -0.29
CHRNA4-203ENST00000467563 MGAM2Q2M2H8 2515 aa13.23□□□□□ -0.29
CHRNA4-203ENST00000467563 F8VRH5 84 aa13.23□□□□□ -0.29
CHRNA4-203ENST00000467563 PRB2P02812 416 aaPredicted RBP13.23□□□□□ -0.29
CHRNA4-203ENST00000467563 ANKRD39Q53RE8 183 aa13.23□□□□□ -0.29
CHRNA4-203ENST00000467563 CHTOPQ9Y3Y2 248 aaKnown RBP13.23□□□□□ -0.29
CHRNA4-203ENST00000467563 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.22□□□□□ -0.29
CHRNA4-203ENST00000467563 IGKV2-29A2NJV5 120 aaPredicted RBP13.22□□□□□ -0.29
CHRNA4-203ENST00000467563 NTM-AS1Q6ZSK4 140 aa13.22□□□□□ -0.29
CHRNA4-203ENST00000467563 PRADC1Q9BSG0 188 aa13.22□□□□□ -0.29
CHRNA4-203ENST00000467563 FAM104AQ969W3 186 aa13.22□□□□□ -0.29
CHRNA4-203ENST00000467563 TCTAP57738 103 aa13.21□□□□□ -0.29
CHRNA4-203ENST00000467563 DAD1P61803 113 aa13.21□□□□□ -0.29
CHRNA4-203ENST00000467563 PMVKQ15126 192 aa13.21□□□□□ -0.29
CHRNA4-203ENST00000467563 CEMP1Q6PRD7 247 aaPredicted RBP13.21□□□□□ -0.29
CHRNA4-203ENST00000467563 CST9LQ9H4G1 147 aa13.21□□□□□ -0.29
CHRNA4-203ENST00000467563 UQCR10Q9UDW1 63 aa13.21□□□□□ -0.29
CHRNA4-203ENST00000467563 TP73-AS1Q9UF72 201 aa13.21□□□□□ -0.29
CHRNA4-203ENST00000467563 IGLV4-3A0A075B6K6 122 aa13.2□□□□□ -0.3
CHRNA4-203ENST00000467563 LINC00694P0DN24 101 aa13.2□□□□□ -0.3
CHRNA4-203ENST00000467563 PYGO1Q9Y3Y4 419 aa13.2□□□□□ -0.3
CHRNA4-203ENST00000467563 SPART-AS1P0CW21 52 aa13.2□□□□□ -0.3
CHRNA4-203ENST00000467563 PLNP26678 52 aa13.2□□□□□ -0.3
CHRNA4-203ENST00000467563 CRYBA4P53673 196 aa13.2□□□□□ -0.3
CHRNA4-203ENST00000467563 UBE2D4Q9Y2X8 147 aa13.19□□□□□ -0.3
CHRNA4-203ENST00000467563 PRO0255Q9UI72 69 aa13.19□□□□□ -0.3
CHRNA4-203ENST00000467563 IGLV4-69A0A075B6H9 119 aa13.18□□□□□ -0.3
CHRNA4-203ENST00000467563 DEFA6Q01524 100 aa13.17□□□□□ -0.3
CHRNA4-203ENST00000467563 GYPEP15421 78 aa13.17□□□□□ -0.3
CHRNA4-203ENST00000467563 GTSF1LQ9H1H1 148 aa13.17□□□□□ -0.3
CHRNA4-203ENST00000467563 SPANXA1Q9NS26 97 aa13.17□□□□□ -0.3
CHRNA4-203ENST00000467563 TENM3Q9P273 2699 aa13.16□□□□□ -0.3
CHRNA4-203ENST00000467563 K7EIL1 84 aa13.16□□□□□ -0.3
CHRNA4-203ENST00000467563 SBSPONQ8IVN8 264 aa13.16□□□□□ -0.3
CHRNA4-203ENST00000467563 IGKV2D-26A0A0A0MRZ7 120 aa13.15□□□□□ -0.3
CHRNA4-203ENST00000467563 ATP5G1P05496 136 aa13.15□□□□□ -0.3
CHRNA4-203ENST00000467563 RNASE13Q5GAN3 156 aaKnown RBP13.15□□□□□ -0.3
CHRNA4-203ENST00000467563 KPRPQ5T749 579 aaPredicted RBP13.15□□□□□ -0.3
CHRNA4-203ENST00000467563 VCX2Q9H322 139 aa13.15□□□□□ -0.3
CHRNA4-203ENST00000467563 C11orf86A6NJI1 115 aa13.14□□□□□ -0.31
CHRNA4-203ENST00000467563 COX8AP10176 69 aa13.14□□□□□ -0.31
CHRNA4-203ENST00000467563 SLC25A34Q6PIV7 304 aa13.14□□□□□ -0.31
CHRNA4-203ENST00000467563 VSIG2Q96IQ7 327 aa13.14□□□□□ -0.31
CHRNA4-203ENST00000467563 AMELXQ99217 191 aa13.14□□□□□ -0.31
CHRNA4-203ENST00000467563 PAX4O43316 350 aa13.14□□□□□ -0.31
CHRNA4-203ENST00000467563 NPSP0C0P6 89 aa13.14□□□□□ -0.31
CHRNA4-203ENST00000467563 PAPPA-AS1Q5QFB9 102 aa13.14□□□□□ -0.31
CHRNA4-203ENST00000467563 NMUP48645 174 aa13.13□□□□□ -0.31
CHRNA4-203ENST00000467563 Q6ZUT4 128 aa13.13□□□□□ -0.31
CHRNA4-203ENST00000467563 A0A0J9YY99 117 aa13.12□□□□□ -0.31
CHRNA4-203ENST00000467563 FGF6P10767 208 aa13.12□□□□□ -0.31
CHRNA4-203ENST00000467563 HNRNPA3P51991 378 aaKnown RBP13.12□□□□□ -0.31
CHRNA4-203ENST00000467563 TIMM21Q9BVV7 248 aa13.12□□□□□ -0.31
CHRNA4-203ENST00000467563 CTAG1AP78358 180 aa13.12□□□□□ -0.31
CHRNA4-203ENST00000467563 C12orf74Q32Q52 190 aa13.12□□□□□ -0.31
CHRNA4-203ENST00000467563 TMEM243Q9BU79 118 aa13.12□□□□□ -0.31
CHRNA4-203ENST00000467563 TEX48A0A1B0GUV7 120 aa13.11□□□□□ -0.31
CHRNA4-203ENST00000467563 F5H768 121 aa13.11□□□□□ -0.31
CHRNA4-203ENST00000467563 PCP2Q8IVA1 136 aa13.11□□□□□ -0.31
CHRNA4-203ENST00000467563 ATP6V0E2Q8NHE4 81 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms