RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 SSBP3-AS1Q7Z2R9 100 aa0.52□□□□□ -2.33
VPS13A-209ENST00000467124 UBE2DNLQ8IWF7 75 aa0.52□□□□□ -2.33
VPS13A-209ENST00000467124 TPRP12270 2363 aaKnown RBP0.52□□□□□ -2.33
VPS13A-209ENST00000467124 ZNF815PA8K554 130 aa0.51□□□□□ -2.33
VPS13A-209ENST00000467124 M0R135 149 aa0.51□□□□□ -2.33
VPS13A-209ENST00000467124 IFNGP01579 166 aa0.51□□□□□ -2.33
VPS13A-209ENST00000467124 MRC1P22897 1456 aa0.51□□□□□ -2.33
VPS13A-209ENST00000467124 S100A1P23297 94 aa0.51□□□□□ -2.33
VPS13A-209ENST00000467124 R4GMQ9 66 aa0.51□□□□□ -2.33
VPS13A-209ENST00000467124 DOCK1Q14185 1865 aa0.5□□□□□ -2.33
VPS13A-209ENST00000467124 LAMC3Q9Y6N6 1575 aa0.5□□□□□ -2.33
VPS13A-209ENST00000467124 V9GYH0 126 aa0.5□□□□□ -2.33
VPS13A-209ENST00000467124 IFT172Q9UG01 1749 aa0.5□□□□□ -2.33
VPS13A-209ENST00000467124 NAV2Q8IVL1 2488 aa0.49□□□□□ -2.33
VPS13A-209ENST00000467124 CPSF1Q10570 1443 aaKnown RBP0.49□□□□□ -2.33
VPS13A-209ENST00000467124 PPIP5K1Q6PFW1 1433 aa0.49□□□□□ -2.33
VPS13A-209ENST00000467124 ABCA12Q86UK0 2595 aa0.49□□□□□ -2.33
VPS13A-209ENST00000467124 TPPP2P59282 170 aa0.49□□□□□ -2.33
VPS13A-209ENST00000467124 LINC00474Q9P2X8 69 aa0.49□□□□□ -2.33
VPS13A-209ENST00000467124 GNG8Q9UK08 70 aa0.49□□□□□ -2.33
VPS13A-209ENST00000467124 F8P00451 2351 aa0.49□□□□□ -2.33
VPS13A-209ENST00000467124 SIPA1L3O60292 1781 aaPredicted RBP0.49□□□□□ -2.33
VPS13A-209ENST00000467124 LRRC37A3O60309 1634 aa0.49□□□□□ -2.33
VPS13A-209ENST00000467124 MYH8P13535 1937 aa0.48□□□□□ -2.33
VPS13A-209ENST00000467124 KTN1Q86UP2 1357 aaKnown RBP0.48□□□□□ -2.33
VPS13A-209ENST00000467124 F6UZH7 168 aa0.48□□□□□ -2.33
VPS13A-209ENST00000467124 C5orf38Q86SI9 138 aa0.48□□□□□ -2.33
VPS13A-209ENST00000467124 SPANXDQ9BXN6 97 aa0.48□□□□□ -2.33
VPS13A-209ENST00000467124 KMT2DO14686 5537 aa0.48□□□□□ -2.33
VPS13A-209ENST00000467124 POLQO75417 2590 aa0.48□□□□□ -2.33
VPS13A-209ENST00000467124 C8orf59Q8N0T1 100 aaPredicted RBP0.47□□□□□ -2.33
VPS13A-209ENST00000467124 C2orf88Q9BSF0 95 aa0.47□□□□□ -2.33
VPS13A-209ENST00000467124 NDUFA4L2Q9NRX3 87 aa0.47□□□□□ -2.33
VPS13A-209ENST00000467124 LENEPQ9Y5L5 61 aa0.47□□□□□ -2.33
VPS13A-209ENST00000467124 PRDM2Q13029 1718 aa0.47□□□□□ -2.33
VPS13A-209ENST00000467124 ASXL3Q9C0F0 2248 aa0.46□□□□□ -2.34
VPS13A-209ENST00000467124 PATJQ8NI35 1801 aa0.46□□□□□ -2.34
VPS13A-209ENST00000467124 TRBV7-3A0A075B6L6 115 aa0.46□□□□□ -2.34
VPS13A-209ENST00000467124 PI4KAP42356 2102 aa0.46□□□□□ -2.34
VPS13A-209ENST00000467124 HAMPP81172 84 aa0.45□□□□□ -2.34
VPS13A-209ENST00000467124 Q5VV11 94 aa0.45□□□□□ -2.34
VPS13A-209ENST00000467124 COMMD6Q7Z4G1 85 aa0.45□□□□□ -2.34
VPS13A-209ENST00000467124 A2ML1A8K2U0 1454 aa0.45□□□□□ -2.34
VPS13A-209ENST00000467124 UNC13BO14795 1591 aa0.45□□□□□ -2.34
VPS13A-209ENST00000467124 ROBO1Q9Y6N7 1651 aa0.44□□□□□ -2.34
VPS13A-209ENST00000467124 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
VPS13A-209ENST00000467124 CORTO00230 105 aa0.44□□□□□ -2.34
VPS13A-209ENST00000467124 PPP3R1P63098 170 aa0.44□□□□□ -2.34
VPS13A-209ENST00000467124 CYP4F30PQ9H0H9 118 aa0.44□□□□□ -2.34
VPS13A-209ENST00000467124 DYNLRB1Q9NP97 96 aa0.44□□□□□ -2.34
VPS13A-209ENST00000467124 ZFYVE26Q68DK2 2539 aa0.44□□□□□ -2.34
VPS13A-209ENST00000467124 IGF2RP11717 2491 aa0.44□□□□□ -2.34
VPS13A-209ENST00000467124 NALCNQ8IZF0 1738 aa0.44□□□□□ -2.34
VPS13A-209ENST00000467124 CACNA1CQ13936 2221 aa0.44□□□□□ -2.34
VPS13A-209ENST00000467124 QRICH2Q9H0J4 1663 aa0.43□□□□□ -2.34
VPS13A-209ENST00000467124 ZNF236Q9UL36 1845 aa0.43□□□□□ -2.34
VPS13A-209ENST00000467124 TNFP01375 233 aa0.43□□□□□ -2.34
VPS13A-209ENST00000467124 GNG4P50150 75 aa0.43□□□□□ -2.34
VPS13A-209ENST00000467124 FAM213BQ8TBF2 198 aa0.43□□□□□ -2.34
VPS13A-209ENST00000467124 MGST2Q99735 147 aa0.43□□□□□ -2.34
VPS13A-209ENST00000467124 F8VRH5 84 aa0.42□□□□□ -2.34
VPS13A-209ENST00000467124 SSSCA1O60232 199 aa0.42□□□□□ -2.34
VPS13A-209ENST00000467124 TMEM170BQ5T4T1 132 aa0.42□□□□□ -2.34
VPS13A-209ENST00000467124 SVBPQ8N300 66 aa0.42□□□□□ -2.34
VPS13A-209ENST00000467124 MYOZ3Q8TDC0 251 aa0.42□□□□□ -2.34
VPS13A-209ENST00000467124 SMIM4Q8WVI0 70 aa0.42□□□□□ -2.34
VPS13A-209ENST00000467124 CUL7Q14999 1698 aa0.42□□□□□ -2.34
VPS13A-209ENST00000467124 MDN1Q9NU22 5596 aa0.42□□□□□ -2.34
VPS13A-209ENST00000467124 MYOM2P54296 1465 aa0.41□□□□□ -2.34
VPS13A-209ENST00000467124 BCL9LQ86UU0 1499 aa0.41□□□□□ -2.34
VPS13A-209ENST00000467124 PXDNQ92626 1479 aa0.41□□□□□ -2.34
VPS13A-209ENST00000467124 IGLC7A0M8Q6 106 aa0.41□□□□□ -2.34
VPS13A-209ENST00000467124 FAM24AA6NFZ4 105 aa0.41□□□□□ -2.34
VPS13A-209ENST00000467124 CHKB-CPT1BH3BT56 60 aa0.41□□□□□ -2.34
VPS13A-209ENST00000467124 HMGN4O00479 90 aa0.41□□□□□ -2.34
VPS13A-209ENST00000467124 GNG11P61952 73 aa0.41□□□□□ -2.34
VPS13A-209ENST00000467124 BAGE2Q86Y30 109 aa0.41□□□□□ -2.34
VPS13A-209ENST00000467124 TMEM203Q969S6 136 aa0.41□□□□□ -2.34
VPS13A-209ENST00000467124 DPH3P1Q9H4G8 78 aa0.41□□□□□ -2.34
VPS13A-209ENST00000467124 PRO0255Q9UI72 69 aa0.41□□□□□ -2.34
VPS13A-209ENST00000467124 PTPRZ1P23471 2315 aaPredicted RBP0.41□□□□□ -2.34
VPS13A-209ENST00000467124 DOCK2Q92608 1830 aa0.41□□□□□ -2.34
VPS13A-209ENST00000467124 ZNF609O15014 1411 aa0.4□□□□□ -2.34
VPS13A-209ENST00000467124 UBE2L5PA0A1B0GUS4 154 aa0.4□□□□□ -2.35
VPS13A-209ENST00000467124 PIN1P1O15428 100 aa0.4□□□□□ -2.35
VPS13A-209ENST00000467124 SPINK1P00995 79 aa0.4□□□□□ -2.35
VPS13A-209ENST00000467124 UBE2L3P68036 154 aaKnown RBP0.4□□□□□ -2.35
VPS13A-209ENST00000467124 Q5BKY6 102 aa0.4□□□□□ -2.35
VPS13A-209ENST00000467124 FAT4Q6V0I7 4981 aa0.4□□□□□ -2.35
VPS13A-209ENST00000467124 AHCTF1Q8WYP5 2266 aa0.39□□□□□ -2.35
VPS13A-209ENST00000467124 BCE1O60756 84 aa0.39□□□□□ -2.35
VPS13A-209ENST00000467124 SFTA2Q6UW10 78 aa0.39□□□□□ -2.35
VPS13A-209ENST00000467124 AMELXQ99217 191 aa0.39□□□□□ -2.35
VPS13A-209ENST00000467124 IER3IP1Q9Y5U9 82 aa0.39□□□□□ -2.35
VPS13A-209ENST00000467124 SMG6Q86US8 1419 aaKnown RBP0.38□□□□□ -2.35
VPS13A-209ENST00000467124 SPINK8P0C7L1 97 aa0.38□□□□□ -2.35
VPS13A-209ENST00000467124 A0A0D9SFI3 127 aa0.37□□□□□ -2.35
VPS13A-209ENST00000467124 UQCR11O14957 56 aa0.37□□□□□ -2.35
VPS13A-209ENST00000467124 IFITM1P13164 125 aa0.37□□□□□ -2.35
VPS13A-209ENST00000467124 SNCAP37840 140 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms