RNA–Protein interactions for RNA: ENST00000466935.1

SDF2L1-202, Transcript of stromal cell derived factor 2 like 1, humanhuman

TSL 2

Gene SDF2L1, Length 601 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-202ENST00000466935 SMIM15Q7Z3B0 74 aa16.31■□□□□ 0.2
SDF2L1-202ENST00000466935 TRAV8-4A0A0B4J246 113 aa16.3■□□□□ 0.2
SDF2L1-202ENST00000466935 GATCO43716 136 aaKnown RBP16.3■□□□□ 0.2
SDF2L1-202ENST00000466935 DGAT2L7PQ6IED9 249 aa16.3■□□□□ 0.2
SDF2L1-202ENST00000466935 CLPSL2Q6UWE3 100 aa16.3■□□□□ 0.2
SDF2L1-202ENST00000466935 TEX261Q6UWH6 196 aa16.3■□□□□ 0.2
SDF2L1-202ENST00000466935 LINC00528Q8N1L1 170 aa16.3■□□□□ 0.2
SDF2L1-202ENST00000466935 C20orf203Q8NBC4 194 aa16.3■□□□□ 0.2
SDF2L1-202ENST00000466935 GATD1Q8NB37 220 aa16.29■□□□□ 0.2
SDF2L1-202ENST00000466935 AMTP48728 403 aa16.28■□□□□ 0.2
SDF2L1-202ENST00000466935 UBE2L6O14933 153 aa16.27■□□□□ 0.2
SDF2L1-202ENST00000466935 PRSS1P07477 247 aa16.27■□□□□ 0.2
SDF2L1-202ENST00000466935 FOXA3P55318 350 aaPredicted RBP16.27■□□□□ 0.2
SDF2L1-202ENST00000466935 CLRN3Q8NCR9 226 aa16.27■□□□□ 0.2
SDF2L1-202ENST00000466935 IGLV4-60A0A075B6I1 120 aa16.25■□□□□ 0.19
SDF2L1-202ENST00000466935 NCR2O95944 276 aa16.25■□□□□ 0.19
SDF2L1-202ENST00000466935 FAM210AQ96ND0 272 aa16.25■□□□□ 0.19
SDF2L1-202ENST00000466935 SMIM7Q9BQ49 75 aa16.25■□□□□ 0.19
SDF2L1-202ENST00000466935 EIF5A2Q9GZV4 153 aaKnown RBP16.25■□□□□ 0.19
SDF2L1-202ENST00000466935 TRAV26-2A0A0B4J265 109 aa16.24■□□□□ 0.19
SDF2L1-202ENST00000466935 CEBPGP53567 150 aa16.24■□□□□ 0.19
SDF2L1-202ENST00000466935 CIRBP-AS1Q8TBR5 109 aa16.24■□□□□ 0.19
SDF2L1-202ENST00000466935 MYCBP2O75592 4640 aa16.24■□□□□ 0.19
SDF2L1-202ENST00000466935 C9orf163Q8N9P6 203 aa16.23■□□□□ 0.19
SDF2L1-202ENST00000466935 IGLV10-54A0A075B6I4 117 aa16.22■□□□□ 0.19
SDF2L1-202ENST00000466935 FAM231BA6NCW3 169 aa16.22■□□□□ 0.19
SDF2L1-202ENST00000466935 LINC01551Q86U37 167 aa16.22■□□□□ 0.19
SDF2L1-202ENST00000466935 BORCS7Q96B45 105 aa16.22■□□□□ 0.19
SDF2L1-202ENST00000466935 GFRA4Q9GZZ7 299 aa16.22■□□□□ 0.19
SDF2L1-202ENST00000466935 H7C423 109 aa16.21■□□□□ 0.19
SDF2L1-202ENST00000466935 RPL39LQ96EH5 51 aaKnown RBP16.21■□□□□ 0.19
SDF2L1-202ENST00000466935 TSKUQ8WUA8 353 aa16.2■□□□□ 0.18
SDF2L1-202ENST00000466935 OSTCQ9NRP0 149 aa16.2■□□□□ 0.18
SDF2L1-202ENST00000466935 TRBV6-5A0A0K0K1A5 114 aa16.19■□□□□ 0.18
SDF2L1-202ENST00000466935 ZNF727A8MUV8 499 aa16.19■□□□□ 0.18
SDF2L1-202ENST00000466935 CNBPP62633 177 aaKnown RBP16.19■□□□□ 0.18
SDF2L1-202ENST00000466935 DEFB104AQ8WTQ1 72 aa16.19■□□□□ 0.18
SDF2L1-202ENST00000466935 A0A1B0GUT8 65 aa16.18■□□□□ 0.18
SDF2L1-202ENST00000466935 SDHAF1A6NFY7 115 aa16.18■□□□□ 0.18
SDF2L1-202ENST00000466935 SRP19P09132 144 aaKnown RBP16.18■□□□□ 0.18
SDF2L1-202ENST00000466935 HIGD1CA8MV81 97 aa16.17■□□□□ 0.18
SDF2L1-202ENST00000466935 APCSP02743 223 aa16.17■□□□□ 0.18
SDF2L1-202ENST00000466935 AMMECR1LQ6DCA0 310 aa16.16■□□□□ 0.18
SDF2L1-202ENST00000466935 TMEM191AQ9H0A3 160 aa16.16■□□□□ 0.18
SDF2L1-202ENST00000466935 hDV102S1A0JD36 115 aa16.14■□□□□ 0.17
SDF2L1-202ENST00000466935 I3L3M4 83 aa16.14■□□□□ 0.17
SDF2L1-202ENST00000466935 FAM74A3Q4VXF1 159 aa16.14■□□□□ 0.17
SDF2L1-202ENST00000466935 AP5S1Q9NUS5 200 aa16.14■□□□□ 0.17
SDF2L1-202ENST00000466935 HERC1Q15751 4861 aa16.14■□□□□ 0.17
SDF2L1-202ENST00000466935 ZNF25P17030 456 aaPredicted RBP16.13■□□□□ 0.17
SDF2L1-202ENST00000466935 KRTAP10-4P60372 401 aaPredicted RBP16.13■□□□□ 0.17
SDF2L1-202ENST00000466935 SDIM1Q6ZPB5 146 aa16.13■□□□□ 0.17
SDF2L1-202ENST00000466935 PMCHP20382 165 aa16.12■□□□□ 0.17
SDF2L1-202ENST00000466935 CFAP161Q6P656 301 aa16.12■□□□□ 0.17
SDF2L1-202ENST00000466935 MRAP2Q96G30 205 aa16.12■□□□□ 0.17
SDF2L1-202ENST00000466935 ST20Q9HBF5 79 aa16.12■□□□□ 0.17
SDF2L1-202ENST00000466935 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.11■□□□□ 0.17
SDF2L1-202ENST00000466935 A0A1B0GVG6 124 aa16.11■□□□□ 0.17
SDF2L1-202ENST00000466935 FGF6P10767 208 aa16.11■□□□□ 0.17
SDF2L1-202ENST00000466935 V9GYV3 84 aa16.11■□□□□ 0.17
SDF2L1-202ENST00000466935 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.1■□□□□ 0.17
SDF2L1-202ENST00000466935 IGKV2-29A2NJV5 120 aaPredicted RBP16.1■□□□□ 0.17
SDF2L1-202ENST00000466935 TMEM241Q24JQ0 296 aa16.1■□□□□ 0.17
SDF2L1-202ENST00000466935 RNASEKQ6P5S7 137 aaKnown RBP16.1■□□□□ 0.17
SDF2L1-202ENST00000466935 KRTAP29-1A8MX34 341 aaPredicted RBP16.09■□□□□ 0.17
SDF2L1-202ENST00000466935 ISOC2Q96AB3 205 aa16.09■□□□□ 0.17
SDF2L1-202ENST00000466935 RNF185Q96GF1 192 aa16.09■□□□□ 0.17
SDF2L1-202ENST00000466935 IGHV3-64A0A075B6Q5 118 aa16.08■□□□□ 0.16
SDF2L1-202ENST00000466935 GAGE12HA6NDE8 117 aa16.08■□□□□ 0.16
SDF2L1-202ENST00000466935 J3QL48 77 aa16.08■□□□□ 0.16
SDF2L1-202ENST00000466935 ESDP10768 282 aa16.08■□□□□ 0.16
SDF2L1-202ENST00000466935 RAB4AP20338 218 aa16.08■□□□□ 0.16
SDF2L1-202ENST00000466935 POLR2KP53803 58 aaKnown RBP16.08■□□□□ 0.16
SDF2L1-202ENST00000466935 RIGQ13278 110 aa16.08■□□□□ 0.16
SDF2L1-202ENST00000466935 CIRBPQ14011 172 aaKnown RBP16.08■□□□□ 0.16
SDF2L1-202ENST00000466935 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.08■□□□□ 0.16
SDF2L1-202ENST00000466935 TRBV27A0A0K0K1C4 114 aa16.07■□□□□ 0.16
SDF2L1-202ENST00000466935 TSHBP01222 138 aa16.07■□□□□ 0.16
SDF2L1-202ENST00000466935 C15orf56Q8N910 161 aa16.07■□□□□ 0.16
SDF2L1-202ENST00000466935 CHCHD10Q8WYQ3 142 aaPredicted RBP16.07■□□□□ 0.16
SDF2L1-202ENST00000466935 BTF3L4Q96K17 158 aa16.07■□□□□ 0.16
SDF2L1-202ENST00000466935 GAS8-AS1O95177 125 aa16.06■□□□□ 0.16
SDF2L1-202ENST00000466935 PPP1R17O96001 155 aa16.06■□□□□ 0.16
SDF2L1-202ENST00000466935 NUP35Q8NFH5 326 aa16.06■□□□□ 0.16
SDF2L1-202ENST00000466935 OR5A1Q8NGJ0 315 aa16.06■□□□□ 0.16
SDF2L1-202ENST00000466935 TMEM101Q96IK0 257 aa16.06■□□□□ 0.16
SDF2L1-202ENST00000466935 SMDT1Q9H4I9 107 aa16.06■□□□□ 0.16
SDF2L1-202ENST00000466935 IGKV3OR2-268A0A0C4DH90 116 aa16.05■□□□□ 0.16
SDF2L1-202ENST00000466935 SLPIP03973 132 aa16.05■□□□□ 0.16
SDF2L1-202ENST00000466935 RPL23P62829 140 aaKnown RBP16.05■□□□□ 0.16
SDF2L1-202ENST00000466935 AMN1Q8IY45 258 aa16.05■□□□□ 0.16
SDF2L1-202ENST00000466935 NAT8Q9UHE5 227 aa16.05■□□□□ 0.16
SDF2L1-202ENST00000466935 NAT8BQ9UHF3 227 aa16.05■□□□□ 0.16
SDF2L1-202ENST00000466935 RPS10P46783 165 aaKnown RBP16.04■□□□□ 0.16
SDF2L1-202ENST00000466935 MRPL52Q86TS9 123 aaKnown RBP16.04■□□□□ 0.16
SDF2L1-202ENST00000466935 TMEM242Q9NWH2 141 aa16.04■□□□□ 0.16
SDF2L1-202ENST00000466935 PANO1I0J062 215 aa16.03■□□□□ 0.16
SDF2L1-202ENST00000466935 RPL37AP61513 92 aaKnown RBP16.03■□□□□ 0.16
SDF2L1-202ENST00000466935 PEA15Q15121 130 aa16.03■□□□□ 0.16
SDF2L1-202ENST00000466935 GVQW2A0A096LPI5 108 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms