RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 K7EMI3 77 aa10.38□□□□□ -0.75
NPHP4-205ENST00000466897 K7EP13 123 aa10.38□□□□□ -0.75
NPHP4-205ENST00000466897 SIVA1O15304 175 aa10.38□□□□□ -0.75
NPHP4-205ENST00000466897 TSHBP01222 138 aa10.38□□□□□ -0.75
NPHP4-205ENST00000466897 DNAH10OSP0CZ25 163 aa10.38□□□□□ -0.75
NPHP4-205ENST00000466897 PKIAP61925 76 aa10.38□□□□□ -0.75
NPHP4-205ENST00000466897 CHCHD7Q9BUK0 85 aa10.38□□□□□ -0.75
NPHP4-205ENST00000466897 IGLV2-18A0A075B6J9 118 aa10.37□□□□□ -0.75
NPHP4-205ENST00000466897 LINC01556Q5JQF7 62 aa10.37□□□□□ -0.75
NPHP4-205ENST00000466897 WFDC10BQ8IUB3 73 aa10.37□□□□□ -0.75
NPHP4-205ENST00000466897 Q9H8V8 135 aa10.37□□□□□ -0.75
NPHP4-205ENST00000466897 NXT2Q9NPJ8 142 aaKnown RBP10.37□□□□□ -0.75
NPHP4-205ENST00000466897 H7C423 109 aa10.36□□□□□ -0.75
NPHP4-205ENST00000466897 ESDP10768 282 aa10.36□□□□□ -0.75
NPHP4-205ENST00000466897 AMTP48728 403 aa10.36□□□□□ -0.75
NPHP4-205ENST00000466897 Q8N8P6 123 aa10.36□□□□□ -0.75
NPHP4-205ENST00000466897 TMEM243Q9BU79 118 aa10.36□□□□□ -0.75
NPHP4-205ENST00000466897 NIT1Q86X76 327 aa10.35□□□□□ -0.75
NPHP4-205ENST00000466897 TRGC2P03986 189 aa10.34□□□□□ -0.75
NPHP4-205ENST00000466897 FCER1GP30273 86 aa10.34□□□□□ -0.75
NPHP4-205ENST00000466897 CHCHD5Q9BSY4 110 aa10.34□□□□□ -0.75
NPHP4-205ENST00000466897 LINC01546A6NGU7 62 aa10.33□□□□□ -0.76
NPHP4-205ENST00000466897 TTC32Q5I0X7 151 aa10.33□□□□□ -0.76
NPHP4-205ENST00000466897 C18orf32Q8TCD1 76 aa10.33□□□□□ -0.76
NPHP4-205ENST00000466897 LOC389332A0A1B0GUA5 103 aa10.32□□□□□ -0.76
NPHP4-205ENST00000466897 A0A1B0GUV1 79 aa10.32□□□□□ -0.76
NPHP4-205ENST00000466897 BTF3P20290 206 aaKnown RBP10.32□□□□□ -0.76
NPHP4-205ENST00000466897 IFI27P40305 119 aaPredicted RBP10.32□□□□□ -0.76
NPHP4-205ENST00000466897 C10orf126Q8N4M7 172 aa10.32□□□□□ -0.76
NPHP4-205ENST00000466897 RYR3Q15413 4870 aa10.32□□□□□ -0.76
NPHP4-205ENST00000466897 SACSQ9NZJ4 4579 aa10.31□□□□□ -0.76
NPHP4-205ENST00000466897 TRAV9-2A0A087WT02 112 aa10.31□□□□□ -0.76
NPHP4-205ENST00000466897 A0A087WX48 190 aa10.31□□□□□ -0.76
NPHP4-205ENST00000466897 NBDYA0A0U1RRE5 68 aa10.31□□□□□ -0.76
NPHP4-205ENST00000466897 UBE2L6O14933 153 aa10.31□□□□□ -0.76
NPHP4-205ENST00000466897 ORMDL2Q53FV1 153 aa10.31□□□□□ -0.76
NPHP4-205ENST00000466897 Q6ZR54 194 aa10.31□□□□□ -0.76
NPHP4-205ENST00000466897 PRSS3P2Q8NHM4 247 aa10.31□□□□□ -0.76
NPHP4-205ENST00000466897 TMEM18Q96B42 140 aa10.31□□□□□ -0.76
NPHP4-205ENST00000466897 DNAH6Q9C0G6 4158 aa10.31□□□□□ -0.76
NPHP4-205ENST00000466897 ZNF25P17030 456 aaPredicted RBP10.3□□□□□ -0.76
NPHP4-205ENST00000466897 SMAGPQ0VAQ4 97 aa10.3□□□□□ -0.76
NPHP4-205ENST00000466897 MRPL52Q86TS9 123 aaKnown RBP10.3□□□□□ -0.76
NPHP4-205ENST00000466897 C20orf203Q8NBC4 194 aa10.3□□□□□ -0.76
NPHP4-205ENST00000466897 DEFB104AQ8WTQ1 72 aa10.3□□□□□ -0.76
NPHP4-205ENST00000466897 TMEM262E9PQX1 116 aa10.29□□□□□ -0.76
NPHP4-205ENST00000466897 G0S2P27469 103 aa10.29□□□□□ -0.76
NPHP4-205ENST00000466897 GAGE6Q13070 117 aa10.29□□□□□ -0.76
NPHP4-205ENST00000466897 LAGE3Q14657 143 aa10.29□□□□□ -0.76
NPHP4-205ENST00000466897 MPV17L2Q567V2 206 aa10.29□□□□□ -0.76
NPHP4-205ENST00000466897 TIMM21Q9BVV7 248 aa10.29□□□□□ -0.76
NPHP4-205ENST00000466897 CSDC2Q9Y534 153 aaKnown RBP10.29□□□□□ -0.76
NPHP4-205ENST00000466897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.28□□□□□ -0.76
NPHP4-205ENST00000466897 IGKV2-29A2NJV5 120 aaPredicted RBP10.28□□□□□ -0.76
NPHP4-205ENST00000466897 RAB5BP61020 215 aa10.28□□□□□ -0.76
NPHP4-205ENST00000466897 RBX1P62877 108 aa10.28□□□□□ -0.76
NPHP4-205ENST00000466897 Q0VG73 95 aa10.28□□□□□ -0.76
NPHP4-205ENST00000466897 FA2HQ7L5A8 372 aa10.28□□□□□ -0.76
NPHP4-205ENST00000466897 KMT2AQ03164 3969 aa10.27□□□□□ -0.76
NPHP4-205ENST00000466897 LINC01549A6NIU2 74 aa10.27□□□□□ -0.77
NPHP4-205ENST00000466897 IBA57-AS1B1ANH7 110 aa10.27□□□□□ -0.77
NPHP4-205ENST00000466897 IGHV3-30P01768 117 aa10.27□□□□□ -0.77
NPHP4-205ENST00000466897 IGHV3-33P01772 117 aa10.27□□□□□ -0.77
NPHP4-205ENST00000466897 LINC00614P0C842 121 aa10.27□□□□□ -0.77
NPHP4-205ENST00000466897 IGHV3-30-3P0DP02 117 aa10.27□□□□□ -0.77
NPHP4-205ENST00000466897 IGHV3-30-5P0DP03 117 aa10.27□□□□□ -0.77
NPHP4-205ENST00000466897 FGF6P10767 208 aa10.27□□□□□ -0.77
NPHP4-205ENST00000466897 Q8N3U1 123 aa10.27□□□□□ -0.77
NPHP4-205ENST00000466897 KRTAP1-5Q9BYS1 174 aa10.27□□□□□ -0.77
NPHP4-205ENST00000466897 AP5S1Q9NUS5 200 aa10.27□□□□□ -0.77
NPHP4-205ENST00000466897 HYDINQ4G0P3 5121 aa10.26□□□□□ -0.77
NPHP4-205ENST00000466897 AMMECR1LQ6DCA0 310 aa10.26□□□□□ -0.77
NPHP4-205ENST00000466897 Q8N976 141 aa10.26□□□□□ -0.77
NPHP4-205ENST00000466897 URB1-AS1Q96HZ7 61 aa10.26□□□□□ -0.77
NPHP4-205ENST00000466897 SPANXA1Q9NS26 97 aa10.26□□□□□ -0.77
NPHP4-205ENST00000466897 UBE2D4Q9Y2X8 147 aa10.26□□□□□ -0.77
NPHP4-205ENST00000466897 CHCHD1Q96BP2 118 aaKnown RBP10.25□□□□□ -0.77
NPHP4-205ENST00000466897 PRR34Q9NV39 138 aa10.25□□□□□ -0.77
NPHP4-205ENST00000466897 CYSLTR1Q9Y271 337 aa10.25□□□□□ -0.77
NPHP4-205ENST00000466897 PYGO1Q9Y3Y4 419 aa10.25□□□□□ -0.77
NPHP4-205ENST00000466897 IGLV4-60A0A075B6I1 120 aa10.24□□□□□ -0.77
NPHP4-205ENST00000466897 ANGP03950 147 aaKnown RBP10.24□□□□□ -0.77
NPHP4-205ENST00000466897 NPSP0C0P6 89 aa10.24□□□□□ -0.77
NPHP4-205ENST00000466897 RPL39P62891 51 aaKnown RBP10.24□□□□□ -0.77
NPHP4-205ENST00000466897 C2orf66Q6UXQ4 117 aa10.24□□□□□ -0.77
NPHP4-205ENST00000466897 TMEM101Q96IK0 257 aa10.24□□□□□ -0.77
NPHP4-205ENST00000466897 RYR2Q92736 4967 aa10.23□□□□□ -0.77
NPHP4-205ENST00000466897 TRAV8-3A0A0A6YYJ7 113 aa10.23□□□□□ -0.77
NPHP4-205ENST00000466897 RNASEKQ6P5S7 137 aaKnown RBP10.23□□□□□ -0.77
NPHP4-205ENST00000466897 OR5A1Q8NGJ0 315 aa10.23□□□□□ -0.77
NPHP4-205ENST00000466897 TOMM6Q96B49 74 aa10.23□□□□□ -0.77
NPHP4-205ENST00000466897 KLK12Q9UKR0 248 aa10.23□□□□□ -0.77
NPHP4-205ENST00000466897 M0R2N4 97 aa10.22□□□□□ -0.77
NPHP4-205ENST00000466897 HIST1H2BKO60814 126 aa10.22□□□□□ -0.77
NPHP4-205ENST00000466897 HIST1H2BJP06899 126 aa10.22□□□□□ -0.77
NPHP4-205ENST00000466897 HIST1H2BOP23527 126 aa10.22□□□□□ -0.77
NPHP4-205ENST00000466897 HIST1H2BBP33778 126 aa10.22□□□□□ -0.77
NPHP4-205ENST00000466897 HIST1H2BDP58876 126 aa10.22□□□□□ -0.77
NPHP4-205ENST00000466897 HIST1H2BCP62807 126 aa10.22□□□□□ -0.77
NPHP4-205ENST00000466897 MRPS36P82909 103 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 408 ms