RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 TRAV2A0A0B4J234 112 aa11.97□□□□□ -0.49
SLX4-202ENST00000466154 TRBV6-5A0A0K0K1A5 114 aa11.97□□□□□ -0.49
SLX4-202ENST00000466154 G3V4G9 280 aa11.97□□□□□ -0.49
SLX4-202ENST00000466154 PSMB2P49721 201 aa11.96□□□□□ -0.49
SLX4-202ENST00000466154 TMEM238LA0A1B0GVL6 79 aa11.96□□□□□ -0.49
SLX4-202ENST00000466154 A6NJY4 79 aa11.96□□□□□ -0.49
SLX4-202ENST00000466154 Q6ZSV7 163 aa11.96□□□□□ -0.5
SLX4-202ENST00000466154 ZNF418Q8TF45 676 aaPredicted RBP11.96□□□□□ -0.5
SLX4-202ENST00000466154 A0A0J9YY99 117 aa11.95□□□□□ -0.5
SLX4-202ENST00000466154 RPL32P62910 135 aaKnown RBP11.95□□□□□ -0.5
SLX4-202ENST00000466154 TSSC4Q9Y5U2 329 aaPredicted RBP11.95□□□□□ -0.5
SLX4-202ENST00000466154 ZNF415Q09FC8 603 aa11.95□□□□□ -0.5
SLX4-202ENST00000466154 C4orf3Q8WVX3 66 aa11.95□□□□□ -0.5
SLX4-202ENST00000466154 ITPR2Q14571 2701 aa11.95□□□□□ -0.5
SLX4-202ENST00000466154 IGLV4-3A0A075B6K6 122 aa11.94□□□□□ -0.5
SLX4-202ENST00000466154 A0A1B0GV72 72 aa11.94□□□□□ -0.5
SLX4-202ENST00000466154 M0R2P5 195 aa11.94□□□□□ -0.5
SLX4-202ENST00000466154 NPC2P61916 151 aa11.94□□□□□ -0.5
SLX4-202ENST00000466154 DEFB114Q30KQ6 69 aa11.94□□□□□ -0.5
SLX4-202ENST00000466154 STHQ8IWL8 128 aa11.94□□□□□ -0.5
SLX4-202ENST00000466154 RHOHQ15669 191 aa11.94□□□□□ -0.5
SLX4-202ENST00000466154 TENM4Q6N022 2769 aa11.94□□□□□ -0.5
SLX4-202ENST00000466154 AKAP9Q99996 3911 aa11.94□□□□□ -0.5
SLX4-202ENST00000466154 TRAV8-3A0A0A6YYJ7 113 aa11.94□□□□□ -0.5
SLX4-202ENST00000466154 DNAJC9-AS1A6NH13 148 aa11.94□□□□□ -0.5
SLX4-202ENST00000466154 NSUN5P1Q3KNT7 163 aa11.94□□□□□ -0.5
SLX4-202ENST00000466154 A8MZ25 164 aa11.93□□□□□ -0.5
SLX4-202ENST00000466154 SCGB1C2P0DMR2 95 aa11.93□□□□□ -0.5
SLX4-202ENST00000466154 CKS1BP61024 79 aa11.93□□□□□ -0.5
SLX4-202ENST00000466154 GAGE13Q4V321 117 aa11.93□□□□□ -0.5
SLX4-202ENST00000466154 TRGV1A0A0A0MS02 117 aa11.92□□□□□ -0.5
SLX4-202ENST00000466154 PRSS2P07478 247 aa11.92□□□□□ -0.5
SLX4-202ENST00000466154 SIGMAR1Q99720 223 aa11.92□□□□□ -0.5
SLX4-202ENST00000466154 A0A1B0GWB2 263 aa11.92□□□□□ -0.5
SLX4-202ENST00000466154 ZNF22P17026 224 aaPredicted RBP11.92□□□□□ -0.5
SLX4-202ENST00000466154 INSP01308 110 aa11.92□□□□□ -0.5
SLX4-202ENST00000466154 CRYBA4P53673 196 aa11.92□□□□□ -0.5
SLX4-202ENST00000466154 RHODO00212 210 aa11.91□□□□□ -0.5
SLX4-202ENST00000466154 CFAP126Q5VTH2 177 aa11.91□□□□□ -0.5
SLX4-202ENST00000466154 A8MWV9 139 aa11.91□□□□□ -0.5
SLX4-202ENST00000466154 TSPAN13O95857 204 aa11.91□□□□□ -0.5
SLX4-202ENST00000466154 RNF152Q8N8N0 203 aa11.91□□□□□ -0.5
SLX4-202ENST00000466154 FN1P02751 2386 aaKnown RBP11.9□□□□□ -0.5
SLX4-202ENST00000466154 CITED2Q99967 270 aaPredicted RBP11.9□□□□□ -0.5
SLX4-202ENST00000466154 WFDC10AQ9H1F0 79 aa11.9□□□□□ -0.5
SLX4-202ENST00000466154 YAE1D1Q9NRH1 226 aa11.9□□□□□ -0.5
SLX4-202ENST00000466154 Q1RN00 199 aa11.9□□□□□ -0.51
SLX4-202ENST00000466154 DGAT2L7PQ6IED9 249 aa11.9□□□□□ -0.51
SLX4-202ENST00000466154 ESM1Q9NQ30 184 aa11.9□□□□□ -0.51
SLX4-202ENST00000466154 CCL24O00175 119 aa11.89□□□□□ -0.51
SLX4-202ENST00000466154 TMEM223A0PJW6 202 aa11.89□□□□□ -0.51
SLX4-202ENST00000466154 SPINK8P0C7L1 97 aa11.89□□□□□ -0.51
SLX4-202ENST00000466154 ODF3L2Q3SX64 289 aa11.89□□□□□ -0.51
SLX4-202ENST00000466154 TIMM21Q9BVV7 248 aa11.88□□□□□ -0.51
SLX4-202ENST00000466154 SETXQ7Z333 2677 aaKnown RBP11.88□□□□□ -0.51
SLX4-202ENST00000466154 RPL35AP18077 110 aaKnown RBP11.88□□□□□ -0.51
SLX4-202ENST00000466154 INSL3P51460 131 aa11.88□□□□□ -0.51
SLX4-202ENST00000466154 KRTAP1-3Q8IUG1 177 aa11.88□□□□□ -0.51
SLX4-202ENST00000466154 LINC00467Q9BRT7 94 aa11.88□□□□□ -0.51
SLX4-202ENST00000466154 A4D1N5 150 aa11.88□□□□□ -0.51
SLX4-202ENST00000466154 IGHV3-30P01768 117 aa11.88□□□□□ -0.51
SLX4-202ENST00000466154 CFC1BP0CG36 223 aa11.88□□□□□ -0.51
SLX4-202ENST00000466154 CFC1P0CG37 223 aa11.88□□□□□ -0.51
SLX4-202ENST00000466154 IGHV3-30-5P0DP03 117 aa11.88□□□□□ -0.51
SLX4-202ENST00000466154 NDUFA11Q86Y39 141 aa11.88□□□□□ -0.51
SLX4-202ENST00000466154 F8W1H4 67 aa11.87□□□□□ -0.51
SLX4-202ENST00000466154 Q6ZUT4 128 aa11.87□□□□□ -0.51
SLX4-202ENST00000466154 SLC25A29Q8N8R3 303 aa11.87□□□□□ -0.51
SLX4-202ENST00000466154 HELZ2Q9BYK8 2649 aaKnown RBP11.87□□□□□ -0.51
SLX4-202ENST00000466154 A0A0U1RRA0 63 aa11.87□□□□□ -0.51
SLX4-202ENST00000466154 LEPROTO15243 131 aa11.87□□□□□ -0.51
SLX4-202ENST00000466154 PTH2Q96A98 100 aa11.87□□□□□ -0.51
SLX4-202ENST00000466154 MUSTN1Q8IVN3 82 aa11.86□□□□□ -0.51
SLX4-202ENST00000466154 Q8N2B8 174 aa11.86□□□□□ -0.51
SLX4-202ENST00000466154 IGHV3-30-3P0DP02 117 aa11.86□□□□□ -0.51
SLX4-202ENST00000466154 NFE4Q86UQ8 179 aa11.86□□□□□ -0.51
SLX4-202ENST00000466154 GEMIN7Q9H840 131 aaKnown RBP11.86□□□□□ -0.51
SLX4-202ENST00000466154 FASNP49327 2511 aaKnown RBP11.86□□□□□ -0.51
SLX4-202ENST00000466154 UBE2D1P51668 147 aa11.85□□□□□ -0.51
SLX4-202ENST00000466154 LRRC75A-AS1Q8N1F1 130 aa11.85□□□□□ -0.51
SLX4-202ENST00000466154 C11orf72Q8NBR9 251 aa11.85□□□□□ -0.51
SLX4-202ENST00000466154 SPANXB1Q9NS25 103 aaPredicted RBP11.85□□□□□ -0.51
SLX4-202ENST00000466154 GAGE12HA6NDE8 117 aa11.84□□□□□ -0.51
SLX4-202ENST00000466154 AMELXQ99217 191 aa11.84□□□□□ -0.51
SLX4-202ENST00000466154 Q6ZTI0 123 aa11.84□□□□□ -0.51
SLX4-202ENST00000466154 C10orf126Q8N4M7 172 aa11.84□□□□□ -0.51
SLX4-202ENST00000466154 ZNF625Q96I27 306 aaPredicted RBP11.84□□□□□ -0.51
SLX4-202ENST00000466154 SS18L2Q9UHA2 77 aa11.84□□□□□ -0.51
SLX4-202ENST00000466154 DAND5Q8N907 189 aa11.84□□□□□ -0.51
SLX4-202ENST00000466154 HIVEP2P31629 2446 aa11.83□□□□□ -0.52
SLX4-202ENST00000466154 NDUFA7O95182 113 aa11.83□□□□□ -0.52
SLX4-202ENST00000466154 CHCHD7Q9BUK0 85 aa11.83□□□□□ -0.52
SLX4-202ENST00000466154 NOP10Q9NPE3 64 aaKnown RBP11.83□□□□□ -0.52
SLX4-202ENST00000466154 NBEAL2Q6ZNJ1 2754 aa11.83□□□□□ -0.52
SLX4-202ENST00000466154 PRO1854Q9UHT4 67 aa11.83□□□□□ -0.52
SLX4-202ENST00000466154 HECTD1Q9ULT8 2610 aa11.83□□□□□ -0.52
SLX4-202ENST00000466154 GAGE12JA6NER3 117 aa11.82□□□□□ -0.52
SLX4-202ENST00000466154 GAGE4Q13068 117 aa11.82□□□□□ -0.52
SLX4-202ENST00000466154 GAGE5Q13069 117 aa11.82□□□□□ -0.52
SLX4-202ENST00000466154 C1orf158Q8N1D5 194 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms