RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 PRR14LQ5THK1 2151 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 CR1P17927 2039 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 IGHV4-30-2A0A087WSY4 118 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 TRAV22A0A0B4J277 110 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 TEX49A0A1B0GTD5 131 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 TMEM223A0PJW6 202 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 TMEM30CPA0ZSE6 113 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 CEBPZOSA8MTT3 80 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 C11orf94C9JXX5 98 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 J3QRE1 110 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 IGLV2-23P01705 113 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 ZNF22P17026 224 aaPredicted RBP2.18□□□□□ -2.06
SNX4-202ENST00000465505 FXYD7P58549 80 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 C15orf32Q32M92 178 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 C2orf83Q53S99 150 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 C9orf116Q5BN46 136 aaPredicted RBP2.18□□□□□ -2.06
SNX4-202ENST00000465505 Q5VV11 94 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 C20orf197Q8N268 126 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 Q8N6K4 173 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 Q8N814 137 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 Q8NDZ9 215 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 RETNLBQ9BQ08 111 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 PROK2Q9HC23 129 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 GNG13Q9P2W3 67 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 COL4A1P02462 1669 aa2.18□□□□□ -2.06
SNX4-202ENST00000465505 COL5A1P20908 1838 aaPredicted RBP2.17□□□□□ -2.06
SNX4-202ENST00000465505 IGLV1-50A0A075B6I6 118 aa2.17□□□□□ -2.06
SNX4-202ENST00000465505 TRBV30A0A0K0K1B3 111 aa2.17□□□□□ -2.06
SNX4-202ENST00000465505 LOC101927531A0A1B0GV80 90 aa2.17□□□□□ -2.06
SNX4-202ENST00000465505 SMIM27A0A1W2PRY6 76 aa2.17□□□□□ -2.06
SNX4-202ENST00000465505 HCG22E2RYF7 251 aa2.17□□□□□ -2.06
SNX4-202ENST00000465505 F8WEM9 126 aa2.17□□□□□ -2.06
SNX4-202ENST00000465505 HMGA1P17096 107 aaKnown RBP2.17□□□□□ -2.06
SNX4-202ENST00000465505 ROMO1P60602 79 aa2.17□□□□□ -2.06
SNX4-202ENST00000465505 EIF4EBP1Q13541 118 aaPredicted RBP2.17□□□□□ -2.06
SNX4-202ENST00000465505 MIAQ16674 131 aa2.17□□□□□ -2.06
SNX4-202ENST00000465505 HIGD2BQ4VC39 106 aa2.17□□□□□ -2.06
SNX4-202ENST00000465505 S100A7L2Q5SY68 101 aa2.17□□□□□ -2.06
SNX4-202ENST00000465505 LINC01560Q8TB33 94 aa2.17□□□□□ -2.06
SNX4-202ENST00000465505 C7orf33Q8WU49 177 aa2.17□□□□□ -2.06
SNX4-202ENST00000465505 CAMK2N2Q96S95 79 aa2.17□□□□□ -2.06
SNX4-202ENST00000465505 LIMD2Q9BT23 127 aa2.17□□□□□ -2.06
SNX4-202ENST00000465505 FGF23Q9GZV9 251 aaPredicted RBP2.17□□□□□ -2.06
SNX4-202ENST00000465505 C8orf17Q9NRJ1 99 aa2.17□□□□□ -2.06
SNX4-202ENST00000465505 TIMM9Q9Y5J7 89 aa2.17□□□□□ -2.06
SNX4-202ENST00000465505 V9GYV3 84 aa2.17□□□□□ -2.06
SNX4-202ENST00000465505 FREM1Q5H8C1 2179 aa2.16□□□□□ -2.06
SNX4-202ENST00000465505 TMSB15BA0A087X1C1 80 aa2.16□□□□□ -2.06
SNX4-202ENST00000465505 IGHV3-21A0A0B4J1V1 117 aa2.16□□□□□ -2.06
SNX4-202ENST00000465505 IGHV7-4-1A0A0J9YVY3 117 aa2.16□□□□□ -2.06
SNX4-202ENST00000465505 A6NIN4 97 aa2.16□□□□□ -2.06
SNX4-202ENST00000465505 LINC01549A6NIU2 74 aa2.16□□□□□ -2.06
SNX4-202ENST00000465505 C17orf51A8MQB3 221 aa2.16□□□□□ -2.06
SNX4-202ENST00000465505 C5orf67F2Z3F1 127 aa2.16□□□□□ -2.06
SNX4-202ENST00000465505 MSMBP08118 114 aa2.16□□□□□ -2.06
SNX4-202ENST00000465505 RNASE13Q5GAN3 156 aaKnown RBP2.16□□□□□ -2.06
SNX4-202ENST00000465505 C9orf66Q5T8R8 295 aa2.16□□□□□ -2.06
SNX4-202ENST00000465505 GDF5OSQ5U4N7 250 aa2.16□□□□□ -2.06
SNX4-202ENST00000465505 Q8IYB0 196 aa2.16□□□□□ -2.06
SNX4-202ENST00000465505 CNEP1R1Q8N9A8 125 aa2.16□□□□□ -2.06
SNX4-202ENST00000465505 SMIM14Q96QK8 99 aa2.16□□□□□ -2.06
SNX4-202ENST00000465505 TTTY13Q9BZ97 58 aa2.16□□□□□ -2.06
SNX4-202ENST00000465505 CACNA1DQ01668 2161 aa2.16□□□□□ -2.06
SNX4-202ENST00000465505 TNRC6BQ9UPQ9 1833 aaKnown RBP2.15□□□□□ -2.06
SNX4-202ENST00000465505 IGLV8-61A0A075B6I0 122 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 IGLV4-3A0A075B6K6 122 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 A0A087WSZ3 146 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 SDHAF1A6NFY7 115 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 RPL37AP8A6NKH3 93 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 TMEM14DPA8MWL7 114 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 B4DSR2 109 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 H3BVH4 76 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 IGHV1-69P01742 117 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 IGHV3-23P01764 117 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 CLPSP04118 112 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 COX6CP09669 75 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 SUPT4H1P63272 117 aaKnown RBP2.15□□□□□ -2.07
SNX4-202ENST00000465505 REG3GQ6UW15 175 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 C2orf82Q6UX34 121 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 KRTAP11-1Q8IUC1 163 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 KLF14Q8TD94 323 aaPredicted RBP2.15□□□□□ -2.07
SNX4-202ENST00000465505 ATXN7L3BQ96GX2 97 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 CHCHD7Q9BUK0 85 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 CDC42SE2Q9NRR3 84 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 ZNF831Q5JPB2 1677 aa2.15□□□□□ -2.07
SNX4-202ENST00000465505 IGKV2D-26A0A0A0MRZ7 120 aa2.14□□□□□ -2.07
SNX4-202ENST00000465505 IGHV5-51A0A0C4DH38 117 aa2.14□□□□□ -2.07
SNX4-202ENST00000465505 LOC107984156A0A0G2JMH3 177 aa2.14□□□□□ -2.07
SNX4-202ENST00000465505 TRBV7-4A0A0J9YYF1 115 aa2.14□□□□□ -2.07
SNX4-202ENST00000465505 CTXND1A0A1B0GTU2 59 aa2.14□□□□□ -2.07
SNX4-202ENST00000465505 LINC01546A6NGU7 62 aa2.14□□□□□ -2.07
SNX4-202ENST00000465505 MGST1P10620 155 aaKnown RBP2.14□□□□□ -2.07
SNX4-202ENST00000465505 CD24P25063 80 aa2.14□□□□□ -2.07
SNX4-202ENST00000465505 CMC4P56277 68 aaPredicted RBP2.14□□□□□ -2.07
SNX4-202ENST00000465505 IGLV3-21P80748 117 aaPredicted RBP2.14□□□□□ -2.07
SNX4-202ENST00000465505 MOBPQ13875 183 aa2.14□□□□□ -2.07
SNX4-202ENST00000465505 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
SNX4-202ENST00000465505 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
SNX4-202ENST00000465505 ZNF818PQ6ZRF7 136 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms