RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 TRGC1P0CF51 173 aa8.47□□□□□ -1.05
CTDSP1-206ENST00000464255 TWIST1Q15672 202 aa8.47□□□□□ -1.05
CTDSP1-206ENST00000464255 LINC00528Q8N1L1 170 aa8.47□□□□□ -1.05
CTDSP1-206ENST00000464255 CIRBP-AS1Q8TBR5 109 aa8.47□□□□□ -1.05
CTDSP1-206ENST00000464255 PGLYRP4Q96LB8 373 aa8.47□□□□□ -1.05
CTDSP1-206ENST00000464255 TRAV26-2A0A0B4J265 109 aa8.46□□□□□ -1.06
CTDSP1-206ENST00000464255 A0A1B0GUV1 79 aa8.46□□□□□ -1.06
CTDSP1-206ENST00000464255 BLOC1S1P78537 153 aa8.46□□□□□ -1.06
CTDSP1-206ENST00000464255 HLA-DQA1P01909 254 aa8.45□□□□□ -1.06
CTDSP1-206ENST00000464255 REG3AQ06141 175 aa8.45□□□□□ -1.06
CTDSP1-206ENST00000464255 C14orf177Q52M58 125 aa8.45□□□□□ -1.06
CTDSP1-206ENST00000464255 FAM231DQ6ZW35 169 aa8.45□□□□□ -1.06
CTDSP1-206ENST00000464255 TMEM243Q9BU79 118 aa8.45□□□□□ -1.06
CTDSP1-206ENST00000464255 PKHD1L1Q86WI1 4243 aa8.45□□□□□ -1.06
CTDSP1-206ENST00000464255 RPL39LQ96EH5 51 aaKnown RBP8.44□□□□□ -1.06
CTDSP1-206ENST00000464255 IGLV10-54A0A075B6I4 117 aa8.43□□□□□ -1.06
CTDSP1-206ENST00000464255 DGAT2L7PQ6IED9 249 aa8.43□□□□□ -1.06
CTDSP1-206ENST00000464255 PANO1I0J062 215 aa8.42□□□□□ -1.06
CTDSP1-206ENST00000464255 GATCO43716 136 aaKnown RBP8.42□□□□□ -1.06
CTDSP1-206ENST00000464255 GAS8-AS1O95177 125 aa8.42□□□□□ -1.06
CTDSP1-206ENST00000464255 SLPIP03973 132 aa8.42□□□□□ -1.06
CTDSP1-206ENST00000464255 PLA2G1BP04054 148 aaKnown RBP8.42□□□□□ -1.06
CTDSP1-206ENST00000464255 SDIM1Q6ZPB5 146 aa8.42□□□□□ -1.06
CTDSP1-206ENST00000464255 C9orf163Q8N9P6 203 aa8.42□□□□□ -1.06
CTDSP1-206ENST00000464255 TRAV8-4A0A0B4J246 113 aa8.41□□□□□ -1.06
CTDSP1-206ENST00000464255 A8MWL6 223 aa8.41□□□□□ -1.06
CTDSP1-206ENST00000464255 ATP6V1G1O75348 118 aa8.41□□□□□ -1.06
CTDSP1-206ENST00000464255 NDUFS6O75380 124 aaKnown RBP8.41□□□□□ -1.06
CTDSP1-206ENST00000464255 AMTP48728 403 aa8.41□□□□□ -1.06
CTDSP1-206ENST00000464255 COTL1Q14019 142 aa8.41□□□□□ -1.06
CTDSP1-206ENST00000464255 CT83Q5H943 113 aa8.41□□□□□ -1.06
CTDSP1-206ENST00000464255 LINC01551Q86U37 167 aa8.41□□□□□ -1.06
CTDSP1-206ENST00000464255 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.41□□□□□ -1.06
CTDSP1-206ENST00000464255 FAM231BA6NCW3 169 aa8.4□□□□□ -1.06
CTDSP1-206ENST00000464255 SRP19P09132 144 aaKnown RBP8.4□□□□□ -1.06
CTDSP1-206ENST00000464255 CEBPGP53567 150 aa8.4□□□□□ -1.06
CTDSP1-206ENST00000464255 CNBPP62633 177 aaKnown RBP8.39□□□□□ -1.07
CTDSP1-206ENST00000464255 CLRN3Q8NCR9 226 aa8.39□□□□□ -1.07
CTDSP1-206ENST00000464255 RNF185Q96GF1 192 aa8.39□□□□□ -1.07
CTDSP1-206ENST00000464255 SMIM7Q9BQ49 75 aa8.39□□□□□ -1.07
CTDSP1-206ENST00000464255 EIF5A2Q9GZV4 153 aaKnown RBP8.39□□□□□ -1.07
CTDSP1-206ENST00000464255 TRBV6-5A0A0K0K1A5 114 aa8.38□□□□□ -1.07
CTDSP1-206ENST00000464255 SDHAF1A6NFY7 115 aa8.38□□□□□ -1.07
CTDSP1-206ENST00000464255 KRTAP29-1A8MX34 341 aaPredicted RBP8.38□□□□□ -1.07
CTDSP1-206ENST00000464255 C9JQL5 133 aa8.38□□□□□ -1.07
CTDSP1-206ENST00000464255 TSKUQ8WUA8 353 aa8.38□□□□□ -1.07
CTDSP1-206ENST00000464255 OSTCQ9NRP0 149 aa8.38□□□□□ -1.07
CTDSP1-206ENST00000464255 HMCN2Q8NDA2 5059 aa8.38□□□□□ -1.07
CTDSP1-206ENST00000464255 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.37□□□□□ -1.07
CTDSP1-206ENST00000464255 IGKV2-29A2NJV5 120 aaPredicted RBP8.37□□□□□ -1.07
CTDSP1-206ENST00000464255 HIGD1CA8MV81 97 aa8.37□□□□□ -1.07
CTDSP1-206ENST00000464255 UBE2L6O14933 153 aa8.37□□□□□ -1.07
CTDSP1-206ENST00000464255 NCR2O95944 276 aa8.37□□□□□ -1.07
CTDSP1-206ENST00000464255 CIRBPQ14011 172 aaKnown RBP8.37□□□□□ -1.07
CTDSP1-206ENST00000464255 TEX261Q6UWH6 196 aa8.37□□□□□ -1.07
CTDSP1-206ENST00000464255 C15orf56Q8N910 161 aa8.37□□□□□ -1.07
CTDSP1-206ENST00000464255 hDV102S1A0JD36 115 aa8.36□□□□□ -1.07
CTDSP1-206ENST00000464255 ZNF727A8MUV8 499 aa8.36□□□□□ -1.07
CTDSP1-206ENST00000464255 TSHBP01222 138 aa8.36□□□□□ -1.07
CTDSP1-206ENST00000464255 ESDP10768 282 aa8.36□□□□□ -1.07
CTDSP1-206ENST00000464255 RPS10P46783 165 aaKnown RBP8.36□□□□□ -1.07
CTDSP1-206ENST00000464255 SMIM15Q7Z3B0 74 aa8.36□□□□□ -1.07
CTDSP1-206ENST00000464255 TMEM191AQ9H0A3 160 aa8.36□□□□□ -1.07
CTDSP1-206ENST00000464255 V9GYV3 84 aa8.36□□□□□ -1.07
CTDSP1-206ENST00000464255 A0A1B0GUT8 65 aa8.35□□□□□ -1.07
CTDSP1-206ENST00000464255 GAGE12HA6NDE8 117 aa8.35□□□□□ -1.07
CTDSP1-206ENST00000464255 H7C423 109 aa8.35□□□□□ -1.07
CTDSP1-206ENST00000464255 FGF6P10767 208 aa8.35□□□□□ -1.07
CTDSP1-206ENST00000464255 RAB4AP20338 218 aa8.35□□□□□ -1.07
CTDSP1-206ENST00000464255 POLR2KP53803 58 aaKnown RBP8.35□□□□□ -1.07
CTDSP1-206ENST00000464255 I3L3M4 83 aa8.34□□□□□ -1.07
CTDSP1-206ENST00000464255 APCSP02743 223 aa8.34□□□□□ -1.07
CTDSP1-206ENST00000464255 HNRNPA3P51991 378 aaKnown RBP8.34□□□□□ -1.07
CTDSP1-206ENST00000464255 SRSF3P84103 164 aaKnown RBP8.34□□□□□ -1.07
CTDSP1-206ENST00000464255 NUP35Q8NFH5 326 aa8.34□□□□□ -1.07
CTDSP1-206ENST00000464255 CHCHD10Q8WYQ3 142 aaPredicted RBP8.34□□□□□ -1.07
CTDSP1-206ENST00000464255 ISOC2Q96AB3 205 aa8.34□□□□□ -1.07
CTDSP1-206ENST00000464255 UBR4Q5T4S7 5183 aa8.34□□□□□ -1.07
CTDSP1-206ENST00000464255 IGKV3OR2-268A0A0C4DH90 116 aa8.33□□□□□ -1.08
CTDSP1-206ENST00000464255 J3QL48 77 aa8.33□□□□□ -1.08
CTDSP1-206ENST00000464255 PMCHP20382 165 aa8.33□□□□□ -1.08
CTDSP1-206ENST00000464255 RPL23P62829 140 aaKnown RBP8.33□□□□□ -1.08
CTDSP1-206ENST00000464255 FOXI1Q12951 378 aa8.33□□□□□ -1.08
CTDSP1-206ENST00000464255 TMEM241Q24JQ0 296 aa8.33□□□□□ -1.08
CTDSP1-206ENST00000464255 AMN1Q8IY45 258 aa8.33□□□□□ -1.08
CTDSP1-206ENST00000464255 TRBV27A0A0K0K1C4 114 aa8.32□□□□□ -1.08
CTDSP1-206ENST00000464255 SMKR1H3BMG3 65 aa8.32□□□□□ -1.08
CTDSP1-206ENST00000464255 AMMECR1LQ6DCA0 310 aa8.32□□□□□ -1.08
CTDSP1-206ENST00000464255 RNASEKQ6P5S7 137 aaKnown RBP8.32□□□□□ -1.08
CTDSP1-206ENST00000464255 NRACQ8N912 160 aa8.32□□□□□ -1.08
CTDSP1-206ENST00000464255 ST20Q9HBF5 79 aa8.32□□□□□ -1.08
CTDSP1-206ENST00000464255 TMEM242Q9NWH2 141 aa8.32□□□□□ -1.08
CTDSP1-206ENST00000464255 IGHV3-64A0A075B6Q5 118 aa8.31□□□□□ -1.08
CTDSP1-206ENST00000464255 CHTF8P0CG12 524 aa8.31□□□□□ -1.08
CTDSP1-206ENST00000464255 RPL37AP61513 92 aaKnown RBP8.31□□□□□ -1.08
CTDSP1-206ENST00000464255 NDUFA5Q16718 116 aa8.31□□□□□ -1.08
CTDSP1-206ENST00000464255 FAM74A3Q4VXF1 159 aa8.31□□□□□ -1.08
CTDSP1-206ENST00000464255 BORCS7Q96B45 105 aa8.31□□□□□ -1.08
CTDSP1-206ENST00000464255 MRAP2Q96G30 205 aa8.31□□□□□ -1.08
CTDSP1-206ENST00000464255 GVQW2A0A096LPI5 108 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 228.4 ms