RNA–Protein interactions for RNA: ENST00000463936.1

RTN4R-204, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-204ENST00000463936 OSTCQ9NRP0 149 aa9.53□□□□□ -0.88
RTN4R-204ENST00000463936 F5H697 171 aa9.52□□□□□ -0.89
RTN4R-204ENST00000463936 S100A6P06703 90 aa9.52□□□□□ -0.89
RTN4R-204ENST00000463936 DNAJC30Q96LL9 226 aa9.52□□□□□ -0.89
RTN4R-204ENST00000463936 TMEM70Q9BUB7 260 aa9.52□□□□□ -0.89
RTN4R-204ENST00000463936 URGCP-MRPS24S4R325 110 aa9.52□□□□□ -0.89
RTN4R-204ENST00000463936 LRP1Q07954 4544 aaKnown RBP9.52□□□□□ -0.89
RTN4R-204ENST00000463936 C5orf52A6NGY3 159 aa9.51□□□□□ -0.89
RTN4R-204ENST00000463936 A8MWL6 223 aa9.51□□□□□ -0.89
RTN4R-204ENST00000463936 TRGC1P0CF51 173 aa9.51□□□□□ -0.89
RTN4R-204ENST00000463936 FOXA3P55318 350 aaPredicted RBP9.51□□□□□ -0.89
RTN4R-204ENST00000463936 M0QY20 66 aa9.5□□□□□ -0.89
RTN4R-204ENST00000463936 MGPP08493 103 aa9.5□□□□□ -0.89
RTN4R-204ENST00000463936 TWIST1Q15672 202 aa9.5□□□□□ -0.89
RTN4R-204ENST00000463936 SUMO4Q6EEV6 95 aa9.5□□□□□ -0.89
RTN4R-204ENST00000463936 DPH3P1Q9H4G8 78 aa9.5□□□□□ -0.89
RTN4R-204ENST00000463936 PSCAO43653 123 aa9.49□□□□□ -0.89
RTN4R-204ENST00000463936 COX19Q49B96 90 aa9.49□□□□□ -0.89
RTN4R-204ENST00000463936 LINC01620Q4KN68 170 aa9.49□□□□□ -0.89
RTN4R-204ENST00000463936 NTN5Q8WTR8 489 aaPredicted RBP9.49□□□□□ -0.89
RTN4R-204ENST00000463936 PGLYRP4Q96LB8 373 aa9.49□□□□□ -0.89
RTN4R-204ENST00000463936 V9GYV3 84 aa9.49□□□□□ -0.89
RTN4R-204ENST00000463936 FAM229AH3BQW9 127 aa9.48□□□□□ -0.89
RTN4R-204ENST00000463936 PHOX2AO14813 284 aa9.48□□□□□ -0.89
RTN4R-204ENST00000463936 LECT2O14960 151 aa9.48□□□□□ -0.89
RTN4R-204ENST00000463936 Q6ZSA8 131 aa9.48□□□□□ -0.89
RTN4R-204ENST00000463936 DAZ4Q86SG3 579 aaKnown RBP9.48□□□□□ -0.89
RTN4R-204ENST00000463936 TSKUQ8WUA8 353 aa9.48□□□□□ -0.89
RTN4R-204ENST00000463936 GFRA4Q9GZZ7 299 aa9.48□□□□□ -0.89
RTN4R-204ENST00000463936 DAZ3Q9NR90 486 aaKnown RBP9.48□□□□□ -0.89
RTN4R-204ENST00000463936 FAM231BA6NCW3 169 aa9.47□□□□□ -0.89
RTN4R-204ENST00000463936 H7C1H1 209 aa9.47□□□□□ -0.89
RTN4R-204ENST00000463936 TRGC2P03986 189 aa9.47□□□□□ -0.89
RTN4R-204ENST00000463936 SNRPEP62304 92 aaKnown RBP9.47□□□□□ -0.89
RTN4R-204ENST00000463936 NIT1Q86X76 327 aa9.47□□□□□ -0.89
RTN4R-204ENST00000463936 FAT3Q8TDW7 4589 aa9.46□□□□□ -0.89
RTN4R-204ENST00000463936 TRBV6-8A0A0A6YYG3 113 aa9.46□□□□□ -0.9
RTN4R-204ENST00000463936 HIGD1CA8MV81 97 aa9.46□□□□□ -0.9
RTN4R-204ENST00000463936 HIST1H2BKO60814 126 aa9.46□□□□□ -0.9
RTN4R-204ENST00000463936 S100A8P05109 93 aa9.46□□□□□ -0.9
RTN4R-204ENST00000463936 HIST1H2BJP06899 126 aa9.46□□□□□ -0.9
RTN4R-204ENST00000463936 HIST1H2BOP23527 126 aa9.46□□□□□ -0.9
RTN4R-204ENST00000463936 HIST1H2BBP33778 126 aa9.46□□□□□ -0.9
RTN4R-204ENST00000463936 HIST1H2BDP58876 126 aa9.46□□□□□ -0.9
RTN4R-204ENST00000463936 KRTAP10-4P60372 401 aaPredicted RBP9.46□□□□□ -0.9
RTN4R-204ENST00000463936 HIST1H2BCP62807 126 aa9.46□□□□□ -0.9
RTN4R-204ENST00000463936 HIST2H2BEQ16778 126 aa9.46□□□□□ -0.9
RTN4R-204ENST00000463936 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.46□□□□□ -0.9
RTN4R-204ENST00000463936 RASL11AQ6T310 242 aa9.46□□□□□ -0.9
RTN4R-204ENST00000463936 NTM-AS1Q6ZSK4 140 aa9.46□□□□□ -0.9
RTN4R-204ENST00000463936 HIST1H2BHQ93079 126 aa9.46□□□□□ -0.9
RTN4R-204ENST00000463936 HIST1H2BNQ99877 126 aa9.46□□□□□ -0.9
RTN4R-204ENST00000463936 HIST1H2BMQ99879 126 aa9.46□□□□□ -0.9
RTN4R-204ENST00000463936 LAGE3Q14657 143 aa9.45□□□□□ -0.9
RTN4R-204ENST00000463936 SMIM27A0A1W2PRY6 76 aa9.44□□□□□ -0.9
RTN4R-204ENST00000463936 FABP9Q0Z7S8 132 aa9.44□□□□□ -0.9
RTN4R-204ENST00000463936 TMEM97Q5BJF2 176 aa9.44□□□□□ -0.9
RTN4R-204ENST00000463936 COA6Q5JTJ3 125 aaKnown RBP9.44□□□□□ -0.9
RTN4R-204ENST00000463936 GATD1Q8NB37 220 aa9.44□□□□□ -0.9
RTN4R-204ENST00000463936 BAALCQ8WXS3 180 aa9.44□□□□□ -0.9
RTN4R-204ENST00000463936 CHCHD7Q9BUK0 85 aa9.44□□□□□ -0.9
RTN4R-204ENST00000463936 NIT2Q9NQR4 276 aa9.44□□□□□ -0.9
RTN4R-204ENST00000463936 A0A1B0GUT8 65 aa9.43□□□□□ -0.9
RTN4R-204ENST00000463936 SMIM15Q7Z3B0 74 aa9.43□□□□□ -0.9
RTN4R-204ENST00000463936 NUP35Q8NFH5 326 aa9.43□□□□□ -0.9
RTN4R-204ENST00000463936 BORCS7Q96B45 105 aa9.43□□□□□ -0.9
RTN4R-204ENST00000463936 HMCN2Q8NDA2 5059 aa9.43□□□□□ -0.9
RTN4R-204ENST00000463936 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.42□□□□□ -0.9
RTN4R-204ENST00000463936 TRAV26-2A0A0B4J265 109 aa9.42□□□□□ -0.9
RTN4R-204ENST00000463936 MT-ND6P03923 174 aa9.42□□□□□ -0.9
RTN4R-204ENST00000463936 LINC00518Q8N0U6 118 aa9.42□□□□□ -0.9
RTN4R-204ENST00000463936 LINC00528Q8N1L1 170 aa9.42□□□□□ -0.9
RTN4R-204ENST00000463936 GNB1LQ9BYB4 327 aa9.42□□□□□ -0.9
RTN4R-204ENST00000463936 PKHD1L1Q86WI1 4243 aa9.42□□□□□ -0.9
RTN4R-204ENST00000463936 A0A087WX48 190 aa9.41□□□□□ -0.9
RTN4R-204ENST00000463936 NDUFA6P56556 154 aa9.41□□□□□ -0.9
RTN4R-204ENST00000463936 IQCJQ1A5X6 159 aa9.41□□□□□ -0.9
RTN4R-204ENST00000463936 TMEM191AQ9H0A3 160 aa9.41□□□□□ -0.9
RTN4R-204ENST00000463936 NAT8BQ9UHF3 227 aa9.41□□□□□ -0.9
RTN4R-204ENST00000463936 TRAV8-3A0A0A6YYJ7 113 aa9.4□□□□□ -0.9
RTN4R-204ENST00000463936 SCXQ7RTU7 201 aa9.4□□□□□ -0.9
RTN4R-204ENST00000463936 RPL39LQ96EH5 51 aaKnown RBP9.4□□□□□ -0.9
RTN4R-204ENST00000463936 RNF185Q96GF1 192 aa9.4□□□□□ -0.9
RTN4R-204ENST00000463936 KLK12Q9UKR0 248 aa9.4□□□□□ -0.9
RTN4R-204ENST00000463936 TRAPPC1Q9Y5R8 145 aa9.4□□□□□ -0.9
RTN4R-204ENST00000463936 TRBV25-1A0A075B6N4 114 aa9.39□□□□□ -0.91
RTN4R-204ENST00000463936 IGHV1-24A0A0C4DH33 117 aa9.39□□□□□ -0.91
RTN4R-204ENST00000463936 KRTAP29-1A8MX34 341 aaPredicted RBP9.39□□□□□ -0.91
RTN4R-204ENST00000463936 TMEM262E9PQX1 116 aa9.39□□□□□ -0.91
RTN4R-204ENST00000463936 SMIM6P0DI80 62 aa9.39□□□□□ -0.91
RTN4R-204ENST00000463936 AKR1D1P51857 326 aa9.39□□□□□ -0.91
RTN4R-204ENST00000463936 RIGQ13278 110 aa9.39□□□□□ -0.91
RTN4R-204ENST00000463936 MPV17L2Q567V2 206 aa9.39□□□□□ -0.91
RTN4R-204ENST00000463936 ATP5L2Q7Z4Y8 100 aa9.39□□□□□ -0.91
RTN4R-204ENST00000463936 CHCHD5Q9BSY4 110 aa9.39□□□□□ -0.91
RTN4R-204ENST00000463936 TM2D2Q9BX73 214 aa9.39□□□□□ -0.91
RTN4R-204ENST00000463936 GAS8-AS1O95177 125 aa9.38□□□□□ -0.91
RTN4R-204ENST00000463936 RAB4AP20338 218 aa9.38□□□□□ -0.91
RTN4R-204ENST00000463936 PKIAP61925 76 aa9.38□□□□□ -0.91
RTN4R-204ENST00000463936 TRBV6-5A0A0K0K1A5 114 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms