RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 MAJINQ3KP22 176 aa9.68□□□□□ -0.86
CMSS1-202ENST00000463526 LYZL1Q6UWQ5 148 aa9.68□□□□□ -0.86
CMSS1-202ENST00000463526 C7orf33Q8WU49 177 aa9.68□□□□□ -0.86
CMSS1-202ENST00000463526 GTSF1Q8WW33 167 aa9.68□□□□□ -0.86
CMSS1-202ENST00000463526 NIT2Q9NQR4 276 aa9.68□□□□□ -0.86
CMSS1-202ENST00000463526 IGKV2-24A0A0C4DH68 120 aa9.67□□□□□ -0.86
CMSS1-202ENST00000463526 TRGC1P0CF51 173 aa9.67□□□□□ -0.86
CMSS1-202ENST00000463526 NTF3P20783 257 aa9.67□□□□□ -0.86
CMSS1-202ENST00000463526 ZNF345Q14585 488 aa9.67□□□□□ -0.86
CMSS1-202ENST00000463526 CFAP161Q6P656 301 aa9.67□□□□□ -0.86
CMSS1-202ENST00000463526 C15orf56Q8N910 161 aa9.67□□□□□ -0.86
CMSS1-202ENST00000463526 PRSS3P2Q8NHM4 247 aa9.67□□□□□ -0.86
CMSS1-202ENST00000463526 C11orf52Q96A22 123 aa9.67□□□□□ -0.86
CMSS1-202ENST00000463526 PLAC8Q9NZF1 115 aa9.67□□□□□ -0.86
CMSS1-202ENST00000463526 C19orf71A6NCJ1 209 aa9.66□□□□□ -0.86
CMSS1-202ENST00000463526 BCL2L11O43521 198 aa9.66□□□□□ -0.86
CMSS1-202ENST00000463526 IFNA1P01562 189 aa9.66□□□□□ -0.86
CMSS1-202ENST00000463526 GNG4P50150 75 aa9.66□□□□□ -0.86
CMSS1-202ENST00000463526 ODF1Q14990 250 aa9.66□□□□□ -0.86
CMSS1-202ENST00000463526 LYPD6BQ8NI32 183 aa9.66□□□□□ -0.86
CMSS1-202ENST00000463526 PGLYRP4Q96LB8 373 aa9.66□□□□□ -0.86
CMSS1-202ENST00000463526 MANBALQ9NQG1 85 aa9.66□□□□□ -0.86
CMSS1-202ENST00000463526 TNXBP22105 4242 aa9.66□□□□□ -0.86
CMSS1-202ENST00000463526 LRP2P98164 4655 aa9.66□□□□□ -0.86
CMSS1-202ENST00000463526 XKRY2A2RUG3 117 aa9.65□□□□□ -0.86
CMSS1-202ENST00000463526 F2Z2F3 143 aa9.65□□□□□ -0.86
CMSS1-202ENST00000463526 RPS10P46783 165 aaKnown RBP9.65□□□□□ -0.86
CMSS1-202ENST00000463526 RGS21Q2M5E4 152 aa9.65□□□□□ -0.86
CMSS1-202ENST00000463526 TRAV26-2A0A0B4J265 109 aa9.64□□□□□ -0.87
CMSS1-202ENST00000463526 NDUFS6O75380 124 aaKnown RBP9.64□□□□□ -0.87
CMSS1-202ENST00000463526 AMMECR1LQ6DCA0 310 aa9.64□□□□□ -0.87
CMSS1-202ENST00000463526 CHCHD10Q8WYQ3 142 aaPredicted RBP9.64□□□□□ -0.87
CMSS1-202ENST00000463526 HMSDA8MTL9 139 aa9.63□□□□□ -0.87
CMSS1-202ENST00000463526 EIF5AP63241 154 aaKnown RBP9.63□□□□□ -0.87
CMSS1-202ENST00000463526 TWIST1Q15672 202 aa9.63□□□□□ -0.87
CMSS1-202ENST00000463526 RNASEKQ6P5S7 137 aaKnown RBP9.63□□□□□ -0.87
CMSS1-202ENST00000463526 STPG4Q8N801 248 aa9.63□□□□□ -0.87
CMSS1-202ENST00000463526 MED9Q9NWA0 146 aa9.63□□□□□ -0.87
CMSS1-202ENST00000463526 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.62□□□□□ -0.87
CMSS1-202ENST00000463526 IGKV2-29A2NJV5 120 aaPredicted RBP9.62□□□□□ -0.87
CMSS1-202ENST00000463526 GATD1Q8NB37 220 aa9.62□□□□□ -0.87
CMSS1-202ENST00000463526 PRR3P79522 188 aaKnown RBP9.61□□□□□ -0.87
CMSS1-202ENST00000463526 Q6ZNX1 250 aa9.61□□□□□ -0.87
CMSS1-202ENST00000463526 C9orf62Q8N4C0 152 aa9.61□□□□□ -0.87
CMSS1-202ENST00000463526 NUDT10Q8NFP7 164 aa9.61□□□□□ -0.87
CMSS1-202ENST00000463526 RPL39LQ96EH5 51 aaKnown RBP9.61□□□□□ -0.87
CMSS1-202ENST00000463526 NUDT11Q96G61 164 aa9.61□□□□□ -0.87
CMSS1-202ENST00000463526 TRBV20OR9-2A0A075B6H5 130 aa9.6□□□□□ -0.87
CMSS1-202ENST00000463526 TRAV1-1A0A0B4J248 108 aa9.6□□□□□ -0.87
CMSS1-202ENST00000463526 LINC01600Q96MT4 127 aa9.6□□□□□ -0.87
CMSS1-202ENST00000463526 A0A096LNI7 61 aa9.59□□□□□ -0.87
CMSS1-202ENST00000463526 TEX46H3BTG2 121 aa9.59□□□□□ -0.87
CMSS1-202ENST00000463526 CTRLP40313 264 aa9.59□□□□□ -0.87
CMSS1-202ENST00000463526 FOXA3P55318 350 aaPredicted RBP9.59□□□□□ -0.87
CMSS1-202ENST00000463526 MEF2BQ02080 365 aaPredicted RBP9.59□□□□□ -0.87
CMSS1-202ENST00000463526 SMIM12Q96EX1 92 aa9.59□□□□□ -0.87
CMSS1-202ENST00000463526 LINC00526Q96FQ7 95 aa9.59□□□□□ -0.87
CMSS1-202ENST00000463526 BIN3Q9NQY0 253 aa9.59□□□□□ -0.87
CMSS1-202ENST00000463526 RNF213Q63HN8 5207 aa9.58□□□□□ -0.88
CMSS1-202ENST00000463526 GVQW2A0A096LPI5 108 aaPredicted RBP9.58□□□□□ -0.88
CMSS1-202ENST00000463526 PDE6DO43924 150 aa9.58□□□□□ -0.88
CMSS1-202ENST00000463526 APCSP02743 223 aa9.58□□□□□ -0.88
CMSS1-202ENST00000463526 FGF6P10767 208 aa9.58□□□□□ -0.88
CMSS1-202ENST00000463526 RNASE7Q9H1E1 156 aaKnown RBP9.58□□□□□ -0.88
CMSS1-202ENST00000463526 XCL1P47992 114 aa9.57□□□□□ -0.88
CMSS1-202ENST00000463526 FOXI1Q12951 378 aa9.57□□□□□ -0.88
CMSS1-202ENST00000463526 RPP21Q9H633 154 aaKnown RBP9.57□□□□□ -0.88
CMSS1-202ENST00000463526 SMIM15Q7Z3B0 74 aa9.56□□□□□ -0.88
CMSS1-202ENST00000463526 SDHAF1A6NFY7 115 aa9.55□□□□□ -0.88
CMSS1-202ENST00000463526 NCR2O95944 276 aa9.55□□□□□ -0.88
CMSS1-202ENST00000463526 BCL2P10415 239 aa9.55□□□□□ -0.88
CMSS1-202ENST00000463526 PMCHP20382 165 aa9.55□□□□□ -0.88
CMSS1-202ENST00000463526 CNFNQ9BYD5 112 aa9.55□□□□□ -0.88
CMSS1-202ENST00000463526 A0A0J9YXV3 536 aa9.54□□□□□ -0.88
CMSS1-202ENST00000463526 H7C423 109 aa9.54□□□□□ -0.88
CMSS1-202ENST00000463526 K7EN84 100 aa9.54□□□□□ -0.88
CMSS1-202ENST00000463526 CCL25O15444 150 aa9.54□□□□□ -0.88
CMSS1-202ENST00000463526 EIF5AL1Q6IS14 154 aaKnown RBP9.54□□□□□ -0.88
CMSS1-202ENST00000463526 OR5A1Q8NGJ0 315 aa9.54□□□□□ -0.88
CMSS1-202ENST00000463526 OCC1Q8TAD7 63 aa9.54□□□□□ -0.88
CMSS1-202ENST00000463526 TMEM101Q96IK0 257 aa9.54□□□□□ -0.88
CMSS1-202ENST00000463526 BTF3L4Q96K17 158 aa9.54□□□□□ -0.88
CMSS1-202ENST00000463526 LINC00959A0A1B0GUT2 108 aa9.53□□□□□ -0.88
CMSS1-202ENST00000463526 REG3GQ6UW15 175 aa9.53□□□□□ -0.88
CMSS1-202ENST00000463526 SPINK6Q6UWN8 80 aa9.53□□□□□ -0.88
CMSS1-202ENST00000463526 CARD19Q96LW7 228 aa9.53□□□□□ -0.88
CMSS1-202ENST00000463526 LINC00474Q9P2X8 69 aa9.53□□□□□ -0.88
CMSS1-202ENST00000463526 IGHV1-58A0A0C4DH39 117 aa9.52□□□□□ -0.89
CMSS1-202ENST00000463526 FAM231BA6NCW3 169 aa9.52□□□□□ -0.89
CMSS1-202ENST00000463526 I3L3M4 83 aa9.52□□□□□ -0.89
CMSS1-202ENST00000463526 KRTAP10-8P60410 259 aa9.52□□□□□ -0.89
CMSS1-202ENST00000463526 ZNF25P17030 456 aaPredicted RBP9.51□□□□□ -0.89
CMSS1-202ENST00000463526 TEX261Q6UWH6 196 aa9.51□□□□□ -0.89
CMSS1-202ENST00000463526 TMEM242Q9NWH2 141 aa9.51□□□□□ -0.89
CMSS1-202ENST00000463526 ZNF561-AS1K7EIQ3 104 aa9.5□□□□□ -0.89
CMSS1-202ENST00000463526 GATCO43716 136 aaKnown RBP9.5□□□□□ -0.89
CMSS1-202ENST00000463526 GAS8-AS1O95177 125 aa9.5□□□□□ -0.89
CMSS1-202ENST00000463526 SYCNQ0VAF6 134 aa9.5□□□□□ -0.89
CMSS1-202ENST00000463526 GAGE2BQ13066 116 aa9.5□□□□□ -0.89
CMSS1-202ENST00000463526 SS18Q15532 418 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms