RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 WFDC10BQ8IUB3 73 aa9.48□□□□□ -0.89
PHACTR4-203ENST00000463428 URB1-AS1Q96HZ7 61 aa9.48□□□□□ -0.89
PHACTR4-203ENST00000463428 KIR2DL4Q99706 377 aa9.48□□□□□ -0.89
PHACTR4-203ENST00000463428 TRBV25-1A0A075B6N4 114 aa9.48□□□□□ -0.89
PHACTR4-203ENST00000463428 LINC01546A6NGU7 62 aa9.48□□□□□ -0.89
PHACTR4-203ENST00000463428 LINC00476Q8WZB0 136 aa9.48□□□□□ -0.89
PHACTR4-203ENST00000463428 NXT2Q9NPJ8 142 aaKnown RBP9.48□□□□□ -0.89
PHACTR4-203ENST00000463428 TRAV8-6A0A0B4J262 113 aa9.47□□□□□ -0.89
PHACTR4-203ENST00000463428 AMTP48728 403 aa9.47□□□□□ -0.89
PHACTR4-203ENST00000463428 UBE2DNLQ8IWF7 75 aa9.47□□□□□ -0.89
PHACTR4-203ENST00000463428 ALMS1Q8TCU4 4167 aa9.47□□□□□ -0.89
PHACTR4-203ENST00000463428 FCER1GP30273 86 aa9.46□□□□□ -0.9
PHACTR4-203ENST00000463428 Q0VG73 95 aa9.46□□□□□ -0.9
PHACTR4-203ENST00000463428 NIT1Q86X76 327 aa9.46□□□□□ -0.9
PHACTR4-203ENST00000463428 PRSS3P2Q8NHM4 247 aa9.46□□□□□ -0.9
PHACTR4-203ENST00000463428 TMEM243Q9BU79 118 aa9.46□□□□□ -0.9
PHACTR4-203ENST00000463428 DNAH1Q9P2D7 4330 aa9.45□□□□□ -0.9
PHACTR4-203ENST00000463428 K7EMI3 77 aa9.45□□□□□ -0.9
PHACTR4-203ENST00000463428 Q9H8V8 135 aa9.45□□□□□ -0.9
PHACTR4-203ENST00000463428 SIVA1O15304 175 aa9.44□□□□□ -0.9
PHACTR4-203ENST00000463428 HIST1H2BKO60814 126 aa9.44□□□□□ -0.9
PHACTR4-203ENST00000463428 LY6G6CO95867 125 aa9.44□□□□□ -0.9
PHACTR4-203ENST00000463428 HIST1H2BJP06899 126 aa9.44□□□□□ -0.9
PHACTR4-203ENST00000463428 DNAH10OSP0CZ25 163 aa9.44□□□□□ -0.9
PHACTR4-203ENST00000463428 HIST1H2BOP23527 126 aa9.44□□□□□ -0.9
PHACTR4-203ENST00000463428 HIST1H2BBP33778 126 aa9.44□□□□□ -0.9
PHACTR4-203ENST00000463428 HIST1H2BDP58876 126 aa9.44□□□□□ -0.9
PHACTR4-203ENST00000463428 HIST1H2BCP62807 126 aa9.44□□□□□ -0.9
PHACTR4-203ENST00000463428 HIST2H2BEQ16778 126 aa9.44□□□□□ -0.9
PHACTR4-203ENST00000463428 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.44□□□□□ -0.9
PHACTR4-203ENST00000463428 Q8N3U1 123 aa9.44□□□□□ -0.9
PHACTR4-203ENST00000463428 C20orf203Q8NBC4 194 aa9.44□□□□□ -0.9
PHACTR4-203ENST00000463428 HIST1H2BHQ93079 126 aa9.44□□□□□ -0.9
PHACTR4-203ENST00000463428 HIST1H2BNQ99877 126 aa9.44□□□□□ -0.9
PHACTR4-203ENST00000463428 HIST1H2BMQ99879 126 aa9.44□□□□□ -0.9
PHACTR4-203ENST00000463428 CHCHD5Q9BSY4 110 aa9.44□□□□□ -0.9
PHACTR4-203ENST00000463428 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.43□□□□□ -0.9
PHACTR4-203ENST00000463428 IGKV2-29A2NJV5 120 aaPredicted RBP9.43□□□□□ -0.9
PHACTR4-203ENST00000463428 H7C423 109 aa9.43□□□□□ -0.9
PHACTR4-203ENST00000463428 LINC00614P0C842 121 aa9.43□□□□□ -0.9
PHACTR4-203ENST00000463428 GAGE6Q13070 117 aa9.43□□□□□ -0.9
PHACTR4-203ENST00000463428 LAGE3Q14657 143 aa9.43□□□□□ -0.9
PHACTR4-203ENST00000463428 LINC01556Q5JQF7 62 aa9.43□□□□□ -0.9
PHACTR4-203ENST00000463428 LINC00310P59036 64 aa9.42□□□□□ -0.9
PHACTR4-203ENST00000463428 ORMDL2Q53FV1 153 aa9.42□□□□□ -0.9
PHACTR4-203ENST00000463428 FA2HQ7L5A8 372 aa9.42□□□□□ -0.9
PHACTR4-203ENST00000463428 LCE6AA0A183 80 aa9.41□□□□□ -0.9
PHACTR4-203ENST00000463428 C1orf196B1AJZ1 125 aa9.41□□□□□ -0.9
PHACTR4-203ENST00000463428 RAB5BP61020 215 aa9.41□□□□□ -0.9
PHACTR4-203ENST00000463428 MPV17L2Q567V2 206 aa9.41□□□□□ -0.9
PHACTR4-203ENST00000463428 MRPL52Q86TS9 123 aaKnown RBP9.41□□□□□ -0.9
PHACTR4-203ENST00000463428 AP5S1Q9NUS5 200 aa9.41□□□□□ -0.9
PHACTR4-203ENST00000463428 A0A1B0GUV1 79 aa9.4□□□□□ -0.9
PHACTR4-203ENST00000463428 TMEM262E9PQX1 116 aa9.4□□□□□ -0.9
PHACTR4-203ENST00000463428 FGF6P10767 208 aa9.4□□□□□ -0.9
PHACTR4-203ENST00000463428 RBX1P62877 108 aa9.4□□□□□ -0.9
PHACTR4-203ENST00000463428 RPL39P62891 51 aaKnown RBP9.4□□□□□ -0.9
PHACTR4-203ENST00000463428 KMT2AQ03164 3969 aa9.4□□□□□ -0.9
PHACTR4-203ENST00000463428 DNAH6Q9C0G6 4158 aa9.4□□□□□ -0.91
PHACTR4-203ENST00000463428 IGLV4-60A0A075B6I1 120 aa9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 A0A096LNJ9 63 aa9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 UBE2L6O14933 153 aa9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 NUPR1O60356 82 aa9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 IGHV3-30P01768 117 aa9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 IGHV3-33P01772 117 aa9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 IGHV3-30-3P0DP02 117 aa9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 IGHV3-30-5P0DP03 117 aa9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 PKIAP61925 76 aa9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 BAGE3Q86Y29 109 aa9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 Q8N976 141 aa9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 CHCHD1Q96BP2 118 aaKnown RBP9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 KRTAP1-5Q9BYS1 174 aa9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 UBE2D4Q9Y2X8 147 aa9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 A0A087WX48 190 aa9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 LCE2DQ5TA82 110 aaPredicted RBP9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 RNASEKQ6P5S7 137 aaKnown RBP9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 C2orf66Q6UXQ4 117 aa9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 FAM104AQ969W3 186 aa9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 TMEM18Q96B42 140 aa9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 TIMM21Q9BVV7 248 aa9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 CSDC2Q9Y534 153 aaKnown RBP9.39□□□□□ -0.91
PHACTR4-203ENST00000463428 NBDYA0A0U1RRE5 68 aa9.38□□□□□ -0.91
PHACTR4-203ENST00000463428 SERF1AO75920 110 aa9.38□□□□□ -0.91
PHACTR4-203ENST00000463428 COA6Q5JTJ3 125 aaKnown RBP9.38□□□□□ -0.91
PHACTR4-203ENST00000463428 TOMM6Q96B49 74 aa9.38□□□□□ -0.91
PHACTR4-203ENST00000463428 CYSLTR1Q9Y271 337 aa9.38□□□□□ -0.91
PHACTR4-203ENST00000463428 K7EP13 123 aa9.37□□□□□ -0.91
PHACTR4-203ENST00000463428 ZNF25P17030 456 aaPredicted RBP9.37□□□□□ -0.91
PHACTR4-203ENST00000463428 BTF3P20290 206 aaKnown RBP9.37□□□□□ -0.91
PHACTR4-203ENST00000463428 G0S2P27469 103 aa9.37□□□□□ -0.91
PHACTR4-203ENST00000463428 AMMECR1LQ6DCA0 310 aa9.37□□□□□ -0.91
PHACTR4-203ENST00000463428 Q6ZR54 194 aa9.37□□□□□ -0.91
PHACTR4-203ENST00000463428 PYGO1Q9Y3Y4 419 aa9.37□□□□□ -0.91
PHACTR4-203ENST00000463428 SACSQ9NZJ4 4579 aa9.37□□□□□ -0.91
PHACTR4-203ENST00000463428 IGIPA6NJ69 53 aa9.36□□□□□ -0.91
PHACTR4-203ENST00000463428 IBA57-AS1B1ANH7 110 aa9.36□□□□□ -0.91
PHACTR4-203ENST00000463428 PMCHL1Q16048 86 aa9.36□□□□□ -0.91
PHACTR4-203ENST00000463428 CDC42SE2Q9NRR3 84 aa9.36□□□□□ -0.91
PHACTR4-203ENST00000463428 SPANXA1Q9NS26 97 aa9.36□□□□□ -0.91
PHACTR4-203ENST00000463428 KLK12Q9UKR0 248 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms