RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 C10orf91Q5T1B1 145 aa11.86□□□□□ -0.51
LINC00960-201ENST00000463183 BORCS7Q96B45 105 aa11.86□□□□□ -0.51
LINC00960-201ENST00000463183 SEC11CQ9BY50 192 aa11.86□□□□□ -0.51
LINC00960-201ENST00000463183 SMR3BP02814 79 aaPredicted RBP11.86□□□□□ -0.51
LINC00960-201ENST00000463183 NDUFA5Q16718 116 aa11.86□□□□□ -0.51
LINC00960-201ENST00000463183 IQCJQ1A5X6 159 aa11.86□□□□□ -0.51
LINC00960-201ENST00000463183 LINC01620Q4KN68 170 aa11.86□□□□□ -0.51
LINC00960-201ENST00000463183 LINC00269Q8N2A0 174 aa11.86□□□□□ -0.51
LINC00960-201ENST00000463183 GATD1Q8NB37 220 aa11.86□□□□□ -0.51
LINC00960-201ENST00000463183 RPL39LQ96EH5 51 aaKnown RBP11.86□□□□□ -0.51
LINC00960-201ENST00000463183 TMEM243Q9BU79 118 aa11.86□□□□□ -0.51
LINC00960-201ENST00000463183 DNAH8Q96JB1 4490 aa11.85□□□□□ -0.51
LINC00960-201ENST00000463183 COTL1Q14019 142 aa11.85□□□□□ -0.51
LINC00960-201ENST00000463183 SLC7A5P1Q8MH63 180 aa11.85□□□□□ -0.51
LINC00960-201ENST00000463183 ISOC2Q96AB3 205 aa11.85□□□□□ -0.51
LINC00960-201ENST00000463183 EPM2AB3EWF7 344 aa11.84□□□□□ -0.51
LINC00960-201ENST00000463183 F8W036 122 aa11.84□□□□□ -0.51
LINC00960-201ENST00000463183 UBE2L6O14933 153 aa11.84□□□□□ -0.51
LINC00960-201ENST00000463183 AMTP48728 403 aa11.84□□□□□ -0.51
LINC00960-201ENST00000463183 CT83Q5H943 113 aa11.84□□□□□ -0.51
LINC00960-201ENST00000463183 OSTCQ9NRP0 149 aa11.84□□□□□ -0.51
LINC00960-201ENST00000463183 HIGD1CA8MV81 97 aa11.83□□□□□ -0.52
LINC00960-201ENST00000463183 PNRC1Q12796 327 aaPredicted RBP11.83□□□□□ -0.52
LINC00960-201ENST00000463183 ADIRFQ15847 76 aa11.83□□□□□ -0.52
LINC00960-201ENST00000463183 TSKUQ8WUA8 353 aa11.83□□□□□ -0.52
LINC00960-201ENST00000463183 CARHSP1Q9Y2V2 147 aaKnown RBP11.83□□□□□ -0.52
LINC00960-201ENST00000463183 IGLV10-54A0A075B6I4 117 aa11.82□□□□□ -0.52
LINC00960-201ENST00000463183 MIAQ16674 131 aa11.82□□□□□ -0.52
LINC00960-201ENST00000463183 FAM30AQ9NZY2 134 aa11.82□□□□□ -0.52
LINC00960-201ENST00000463183 IGLV4-60A0A075B6I1 120 aa11.8□□□□□ -0.52
LINC00960-201ENST00000463183 A0A1B0GUT8 65 aa11.8□□□□□ -0.52
LINC00960-201ENST00000463183 REG3AQ06141 175 aa11.8□□□□□ -0.52
LINC00960-201ENST00000463183 FRZBQ92765 325 aa11.8□□□□□ -0.52
LINC00960-201ENST00000463183 TMEM70Q9BUB7 260 aa11.8□□□□□ -0.52
LINC00960-201ENST00000463183 IGKV3OR2-268A0A0C4DH90 116 aa11.79□□□□□ -0.52
LINC00960-201ENST00000463183 Q5VSD8 79 aa11.79□□□□□ -0.52
LINC00960-201ENST00000463183 C20orf203Q8NBC4 194 aa11.79□□□□□ -0.52
LINC00960-201ENST00000463183 V9GYV3 84 aa11.79□□□□□ -0.52
LINC00960-201ENST00000463183 SDHAF1A6NFY7 115 aa11.78□□□□□ -0.52
LINC00960-201ENST00000463183 USP17L23D6RBM5 183 aa11.78□□□□□ -0.52
LINC00960-201ENST00000463183 GAS8-AS1O95177 125 aa11.78□□□□□ -0.52
LINC00960-201ENST00000463183 GFRA4Q9GZZ7 299 aa11.78□□□□□ -0.52
LINC00960-201ENST00000463183 PRR34Q9NV39 138 aa11.78□□□□□ -0.52
LINC00960-201ENST00000463183 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.77□□□□□ -0.53
LINC00960-201ENST00000463183 IGKV2-29A2NJV5 120 aaPredicted RBP11.77□□□□□ -0.53
LINC00960-201ENST00000463183 APCSP02743 223 aa11.77□□□□□ -0.53
LINC00960-201ENST00000463183 C14orf177Q52M58 125 aa11.77□□□□□ -0.53
LINC00960-201ENST00000463183 AMMECR1LQ6DCA0 310 aa11.77□□□□□ -0.53
LINC00960-201ENST00000463183 PMCHP20382 165 aa11.76□□□□□ -0.53
LINC00960-201ENST00000463183 RNASEKQ6P5S7 137 aaKnown RBP11.76□□□□□ -0.53
LINC00960-201ENST00000463183 AMN1Q8IY45 258 aa11.76□□□□□ -0.53
LINC00960-201ENST00000463183 NUP35Q8NFH5 326 aa11.76□□□□□ -0.53
LINC00960-201ENST00000463183 FAM231BA6NCW3 169 aa11.75□□□□□ -0.53
LINC00960-201ENST00000463183 RIGQ13278 110 aa11.75□□□□□ -0.53
LINC00960-201ENST00000463183 TMEM191AQ9H0A3 160 aa11.75□□□□□ -0.53
LINC00960-201ENST00000463183 A0A1B0GUV1 79 aa11.74□□□□□ -0.53
LINC00960-201ENST00000463183 SMKR1H3BMG3 65 aa11.74□□□□□ -0.53
LINC00960-201ENST00000463183 PPP1R2P9O14990 202 aa11.74□□□□□ -0.53
LINC00960-201ENST00000463183 NCR2O95944 276 aa11.74□□□□□ -0.53
LINC00960-201ENST00000463183 MT-ND4LP03901 98 aa11.74□□□□□ -0.53
LINC00960-201ENST00000463183 ST20Q9HBF5 79 aa11.74□□□□□ -0.53
LINC00960-201ENST00000463183 NAT8BQ9UHF3 227 aa11.74□□□□□ -0.53
LINC00960-201ENST00000463183 I3L3M4 83 aa11.73□□□□□ -0.53
LINC00960-201ENST00000463183 RAB4AP20338 218 aa11.73□□□□□ -0.53
LINC00960-201ENST00000463183 RPS10P46783 165 aaKnown RBP11.73□□□□□ -0.53
LINC00960-201ENST00000463183 CLRN3Q8NCR9 226 aa11.73□□□□□ -0.53
LINC00960-201ENST00000463183 ANAPC16Q96DE5 110 aa11.73□□□□□ -0.53
LINC00960-201ENST00000463183 RNF185Q96GF1 192 aa11.73□□□□□ -0.53
LINC00960-201ENST00000463183 TMEM242Q9NWH2 141 aa11.73□□□□□ -0.53
LINC00960-201ENST00000463183 SMIM27A0A1W2PRY6 76 aa11.72□□□□□ -0.53
LINC00960-201ENST00000463183 FAM229AH3BQW9 127 aa11.72□□□□□ -0.53
LINC00960-201ENST00000463183 APOC3P02656 99 aa11.72□□□□□ -0.53
LINC00960-201ENST00000463183 PRSS1P07477 247 aa11.72□□□□□ -0.53
LINC00960-201ENST00000463183 INAFM2P0DMQ5 153 aa11.72□□□□□ -0.53
LINC00960-201ENST00000463183 CAMPP49913 170 aa11.72□□□□□ -0.53
LINC00960-201ENST00000463183 KRTAP26-1Q6PEX3 210 aa11.72□□□□□ -0.53
LINC00960-201ENST00000463183 TRAV8-4A0A0B4J246 113 aa11.7□□□□□ -0.54
LINC00960-201ENST00000463183 TRBV6-5A0A0K0K1A5 114 aa11.7□□□□□ -0.54
LINC00960-201ENST00000463183 C7orf77A4D0Y5 90 aa11.7□□□□□ -0.54
LINC00960-201ENST00000463183 FGF6P10767 208 aa11.7□□□□□ -0.54
LINC00960-201ENST00000463183 RHEBQ15382 184 aa11.7□□□□□ -0.54
LINC00960-201ENST00000463183 SVBPQ8N300 66 aa11.7□□□□□ -0.54
LINC00960-201ENST00000463183 MRAP2Q96G30 205 aa11.7□□□□□ -0.54
LINC00960-201ENST00000463183 CTDSP1Q9GZU7 261 aa11.7□□□□□ -0.54
LINC00960-201ENST00000463183 VPS13BQ7Z7G8 4022 aa11.7□□□□□ -0.54
LINC00960-201ENST00000463183 Q6ZSA8 131 aa11.69□□□□□ -0.54
LINC00960-201ENST00000463183 hDV102S1A0JD36 115 aa11.68□□□□□ -0.54
LINC00960-201ENST00000463183 GAGE12HA6NDE8 117 aa11.68□□□□□ -0.54
LINC00960-201ENST00000463183 SNAPINO95295 136 aa11.68□□□□□ -0.54
LINC00960-201ENST00000463183 TSHBP01222 138 aa11.68□□□□□ -0.54
LINC00960-201ENST00000463183 MRPL54Q6P161 138 aaKnown RBP11.68□□□□□ -0.54
LINC00960-201ENST00000463183 SCXQ7RTU7 201 aa11.68□□□□□ -0.54
LINC00960-201ENST00000463183 BTF3L4Q96K17 158 aa11.68□□□□□ -0.54
LINC00960-201ENST00000463183 TMEM101Q96IK0 257 aa11.67□□□□□ -0.54
LINC00960-201ENST00000463183 IMMP2LQ96T52 175 aa11.67□□□□□ -0.54
LINC00960-201ENST00000463183 FCER1GP30273 86 aa11.66□□□□□ -0.54
LINC00960-201ENST00000463183 LINC00528Q8N1L1 170 aa11.66□□□□□ -0.54
LINC00960-201ENST00000463183 SRRM2Q9UQ35 2752 aaKnown RBP11.66□□□□□ -0.54
LINC00960-201ENST00000463183 H7C423 109 aa11.65□□□□□ -0.54
LINC00960-201ENST00000463183 POLR2KP53803 58 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms