RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 KRTAP26-1Q6PEX3 210 aa4.74□□□□□ -1.65
PTPRF-210ENST00000463041 TEX261Q6UWH6 196 aa4.74□□□□□ -1.65
PTPRF-210ENST00000463041 ALKAL2Q6UX46 152 aa4.74□□□□□ -1.65
PTPRF-210ENST00000463041 FAM231DQ6ZW35 169 aa4.74□□□□□ -1.65
PTPRF-210ENST00000463041 UBE2L6O14933 153 aa4.73□□□□□ -1.65
PTPRF-210ENST00000463041 HLA-DQA1P01909 254 aa4.73□□□□□ -1.65
PTPRF-210ENST00000463041 PRSS1P07477 247 aa4.73□□□□□ -1.65
PTPRF-210ENST00000463041 SCXQ7RTU7 201 aa4.73□□□□□ -1.65
PTPRF-210ENST00000463041 LINC00528Q8N1L1 170 aa4.73□□□□□ -1.65
PTPRF-210ENST00000463041 C9orf163Q8N9P6 203 aa4.73□□□□□ -1.65
PTPRF-210ENST00000463041 GATD1Q8NB37 220 aa4.73□□□□□ -1.65
PTPRF-210ENST00000463041 C20orf203Q8NBC4 194 aa4.73□□□□□ -1.65
PTPRF-210ENST00000463041 GTSF1Q8WW33 167 aa4.73□□□□□ -1.65
PTPRF-210ENST00000463041 FAM210AQ96ND0 272 aa4.73□□□□□ -1.65
PTPRF-210ENST00000463041 hCG_2014768A0A024R1R8 64 aa4.72□□□□□ -1.65
PTPRF-210ENST00000463041 IGLV4-60A0A075B6I1 120 aa4.72□□□□□ -1.65
PTPRF-210ENST00000463041 H7C423 109 aa4.72□□□□□ -1.65
PTPRF-210ENST00000463041 NCR2O95944 276 aa4.72□□□□□ -1.65
PTPRF-210ENST00000463041 AMTP48728 403 aa4.72□□□□□ -1.65
PTPRF-210ENST00000463041 CT83Q5H943 113 aa4.72□□□□□ -1.65
PTPRF-210ENST00000463041 CLPSL2Q6UWE3 100 aa4.72□□□□□ -1.65
PTPRF-210ENST00000463041 CIRBP-AS1Q8TBR5 109 aa4.72□□□□□ -1.65
PTPRF-210ENST00000463041 DEFB104AQ8WTQ1 72 aa4.72□□□□□ -1.65
PTPRF-210ENST00000463041 EIF5A2Q9GZV4 153 aaKnown RBP4.72□□□□□ -1.65
PTPRF-210ENST00000463041 IGLV10-54A0A075B6I4 117 aa4.71□□□□□ -1.66
PTPRF-210ENST00000463041 FAM231BA6NCW3 169 aa4.71□□□□□ -1.66
PTPRF-210ENST00000463041 CEBPGP53567 150 aa4.71□□□□□ -1.66
PTPRF-210ENST00000463041 CFAP161Q6P656 301 aa4.71□□□□□ -1.66
PTPRF-210ENST00000463041 SDIM1Q6ZPB5 146 aa4.71□□□□□ -1.66
PTPRF-210ENST00000463041 BORCS7Q96B45 105 aa4.71□□□□□ -1.66
PTPRF-210ENST00000463041 GFRA4Q9GZZ7 299 aa4.71□□□□□ -1.66
PTPRF-210ENST00000463041 OSTCQ9NRP0 149 aa4.71□□□□□ -1.66
PTPRF-210ENST00000463041 PKHD1L1Q86WI1 4243 aa4.71□□□□□ -1.66
PTPRF-210ENST00000463041 TRAV26-2A0A0B4J265 109 aa4.7□□□□□ -1.66
PTPRF-210ENST00000463041 TRBV6-5A0A0K0K1A5 114 aa4.7□□□□□ -1.66
PTPRF-210ENST00000463041 A0A1B0GUT8 65 aa4.7□□□□□ -1.66
PTPRF-210ENST00000463041 SDHAF1A6NFY7 115 aa4.7□□□□□ -1.66
PTPRF-210ENST00000463041 ZNF727A8MUV8 499 aa4.7□□□□□ -1.66
PTPRF-210ENST00000463041 PMCHP20382 165 aa4.7□□□□□ -1.66
PTPRF-210ENST00000463041 CNBPP62633 177 aaKnown RBP4.7□□□□□ -1.66
PTPRF-210ENST00000463041 AMMECR1LQ6DCA0 310 aa4.7□□□□□ -1.66
PTPRF-210ENST00000463041 LINC01551Q86U37 167 aa4.7□□□□□ -1.66
PTPRF-210ENST00000463041 TSKUQ8WUA8 353 aa4.7□□□□□ -1.66
PTPRF-210ENST00000463041 SMIM7Q9BQ49 75 aa4.7□□□□□ -1.66
PTPRF-210ENST00000463041 AP5S1Q9NUS5 200 aa4.7□□□□□ -1.66
PTPRF-210ENST00000463041 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.69□□□□□ -1.66
PTPRF-210ENST00000463041 hDV102S1A0JD36 115 aa4.69□□□□□ -1.66
PTPRF-210ENST00000463041 HIGD1CA8MV81 97 aa4.69□□□□□ -1.66
PTPRF-210ENST00000463041 KRTAP29-1A8MX34 341 aaPredicted RBP4.69□□□□□ -1.66
PTPRF-210ENST00000463041 I3L3M4 83 aa4.69□□□□□ -1.66
PTPRF-210ENST00000463041 J3QL48 77 aa4.69□□□□□ -1.66
PTPRF-210ENST00000463041 APCSP02743 223 aa4.69□□□□□ -1.66
PTPRF-210ENST00000463041 SRP19P09132 144 aaKnown RBP4.69□□□□□ -1.66
PTPRF-210ENST00000463041 TMEM241Q24JQ0 296 aa4.69□□□□□ -1.66
PTPRF-210ENST00000463041 FAM74A3Q4VXF1 159 aa4.69□□□□□ -1.66
PTPRF-210ENST00000463041 RPL39LQ96EH5 51 aaKnown RBP4.69□□□□□ -1.66
PTPRF-210ENST00000463041 TMEM191AQ9H0A3 160 aa4.69□□□□□ -1.66
PTPRF-210ENST00000463041 FAT3Q8TDW7 4589 aa4.68□□□□□ -1.66
PTPRF-210ENST00000463041 LRP1Q07954 4544 aaKnown RBP4.68□□□□□ -1.66
PTPRF-210ENST00000463041 IGHV3-64A0A075B6Q5 118 aa4.68□□□□□ -1.66
PTPRF-210ENST00000463041 GAGE12HA6NDE8 117 aa4.68□□□□□ -1.66
PTPRF-210ENST00000463041 PPP1R17O96001 155 aa4.68□□□□□ -1.66
PTPRF-210ENST00000463041 FGF6P10767 208 aa4.68□□□□□ -1.66
PTPRF-210ENST00000463041 ZNF25P17030 456 aaPredicted RBP4.68□□□□□ -1.66
PTPRF-210ENST00000463041 RAB4AP20338 218 aa4.68□□□□□ -1.66
PTPRF-210ENST00000463041 POLR2KP53803 58 aaKnown RBP4.68□□□□□ -1.66
PTPRF-210ENST00000463041 KRTAP10-4P60372 401 aaPredicted RBP4.68□□□□□ -1.66
PTPRF-210ENST00000463041 RIGQ13278 110 aa4.68□□□□□ -1.66
PTPRF-210ENST00000463041 RNASEKQ6P5S7 137 aaKnown RBP4.68□□□□□ -1.66
PTPRF-210ENST00000463041 DPH3Q96FX2 82 aa4.68□□□□□ -1.66
PTPRF-210ENST00000463041 MRAP2Q96G30 205 aa4.68□□□□□ -1.66
PTPRF-210ENST00000463041 TMEM101Q96IK0 257 aa4.68□□□□□ -1.66
PTPRF-210ENST00000463041 BTF3L4Q96K17 158 aa4.68□□□□□ -1.66
PTPRF-210ENST00000463041 ST20Q9HBF5 79 aa4.68□□□□□ -1.66
PTPRF-210ENST00000463041 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.67□□□□□ -1.66
PTPRF-210ENST00000463041 TRBV27A0A0K0K1C4 114 aa4.67□□□□□ -1.66
PTPRF-210ENST00000463041 IGKV2-29A2NJV5 120 aaPredicted RBP4.67□□□□□ -1.66
PTPRF-210ENST00000463041 VCYO14598 125 aa4.67□□□□□ -1.66
PTPRF-210ENST00000463041 OXTP01178 125 aa4.67□□□□□ -1.66
PTPRF-210ENST00000463041 SLPIP03973 132 aa4.67□□□□□ -1.66
PTPRF-210ENST00000463041 ESDP10768 282 aa4.67□□□□□ -1.66
PTPRF-210ENST00000463041 CIRBPQ14011 172 aaKnown RBP4.67□□□□□ -1.66
PTPRF-210ENST00000463041 PEA15Q15121 130 aa4.67□□□□□ -1.66
PTPRF-210ENST00000463041 NUP35Q8NFH5 326 aa4.67□□□□□ -1.66
PTPRF-210ENST00000463041 OR5A1Q8NGJ0 315 aa4.67□□□□□ -1.66
PTPRF-210ENST00000463041 CHCHD10Q8WYQ3 142 aaPredicted RBP4.67□□□□□ -1.66
PTPRF-210ENST00000463041 RNF185Q96GF1 192 aa4.67□□□□□ -1.66
PTPRF-210ENST00000463041 SMDT1Q9H4I9 107 aa4.67□□□□□ -1.66
PTPRF-210ENST00000463041 V9GYV3 84 aa4.67□□□□□ -1.66
PTPRF-210ENST00000463041 IGKV3OR2-268A0A0C4DH90 116 aa4.66□□□□□ -1.66
PTPRF-210ENST00000463041 RPS10P46783 165 aaKnown RBP4.66□□□□□ -1.66
PTPRF-210ENST00000463041 RPL37AP61513 92 aaKnown RBP4.66□□□□□ -1.66
PTPRF-210ENST00000463041 SMAGPQ0VAQ4 97 aa4.66□□□□□ -1.66
PTPRF-210ENST00000463041 ISOC2Q96AB3 205 aa4.66□□□□□ -1.66
PTPRF-210ENST00000463041 NAT8BQ9UHF3 227 aa4.66□□□□□ -1.66
PTPRF-210ENST00000463041 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.66□□□□□ -1.66
PTPRF-210ENST00000463041 LINC00959A0A1B0GUT2 108 aa4.65□□□□□ -1.67
PTPRF-210ENST00000463041 A0A1B0GVG6 124 aa4.65□□□□□ -1.67
PTPRF-210ENST00000463041 LINC00862A6NCI5 91 aa4.65□□□□□ -1.67
PTPRF-210ENST00000463041 PANO1I0J062 215 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms