RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 FOXA3P55318 350 aaPredicted RBP5.43□□□□□ -1.54
GARNL3-212ENST00000463005 KRTAP10-1P60331 282 aa5.43□□□□□ -1.54
GARNL3-212ENST00000463005 SERTAD4-AS1Q5TG53 156 aa5.43□□□□□ -1.54
GARNL3-212ENST00000463005 Q6ZTI0 123 aa5.43□□□□□ -1.54
GARNL3-212ENST00000463005 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.43□□□□□ -1.54
GARNL3-212ENST00000463005 DPH3P1Q9H4G8 78 aa5.43□□□□□ -1.54
GARNL3-212ENST00000463005 A0A087WTM6 91 aa5.42□□□□□ -1.54
GARNL3-212ENST00000463005 A0A096LPF7 62 aa5.42□□□□□ -1.54
GARNL3-212ENST00000463005 TGIF2-C20orf24A0A0A6YYL0 155 aa5.42□□□□□ -1.54
GARNL3-212ENST00000463005 TRAV4A0A0B4J268 109 aa5.42□□□□□ -1.54
GARNL3-212ENST00000463005 K7EP13 123 aa5.42□□□□□ -1.54
GARNL3-212ENST00000463005 CIDEAO60543 219 aa5.42□□□□□ -1.54
GARNL3-212ENST00000463005 HLA-DQA1P01909 254 aa5.42□□□□□ -1.54
GARNL3-212ENST00000463005 PIK3CD-AS1Q5SR53 167 aa5.42□□□□□ -1.54
GARNL3-212ENST00000463005 RASL11AQ6T310 242 aa5.42□□□□□ -1.54
GARNL3-212ENST00000463005 C14orf178Q8N769 122 aaPredicted RBP5.42□□□□□ -1.54
GARNL3-212ENST00000463005 RASL10AQ92737 203 aa5.42□□□□□ -1.54
GARNL3-212ENST00000463005 PTH2Q96A98 100 aa5.42□□□□□ -1.54
GARNL3-212ENST00000463005 IGHV3-73A0A0B4J1V6 119 aa5.41□□□□□ -1.54
GARNL3-212ENST00000463005 KRTAP29-1A8MX34 341 aaPredicted RBP5.41□□□□□ -1.54
GARNL3-212ENST00000463005 H7C1H1 209 aa5.41□□□□□ -1.54
GARNL3-212ENST00000463005 NXPH4O95158 308 aa5.41□□□□□ -1.54
GARNL3-212ENST00000463005 MT-ND6P03923 174 aa5.41□□□□□ -1.54
GARNL3-212ENST00000463005 FUSP35637 526 aaKnown RBP eCLIP5.41□□□□□ -1.54
GARNL3-212ENST00000463005 ELOBQ15370 118 aa5.41□□□□□ -1.54
GARNL3-212ENST00000463005 KRTAP15-1Q3LI76 137 aa5.41□□□□□ -1.54
GARNL3-212ENST00000463005 TMEM70Q9BUB7 260 aa5.41□□□□□ -1.54
GARNL3-212ENST00000463005 CNFNQ9BYD5 112 aa5.41□□□□□ -1.54
GARNL3-212ENST00000463005 TMEM191AQ9H0A3 160 aa5.41□□□□□ -1.54
GARNL3-212ENST00000463005 MSRB1Q9NZV6 116 aa5.41□□□□□ -1.54
GARNL3-212ENST00000463005 FAT1Q14517 4588 aa5.41□□□□□ -1.54
GARNL3-212ENST00000463005 SRRM2Q9UQ35 2752 aaKnown RBP5.4□□□□□ -1.54
GARNL3-212ENST00000463005 TRBV24-1A0A075B6N3 115 aa5.4□□□□□ -1.54
GARNL3-212ENST00000463005 GAGE10A6NGK3 116 aa5.4□□□□□ -1.54
GARNL3-212ENST00000463005 RS1O15537 224 aa5.4□□□□□ -1.54
GARNL3-212ENST00000463005 EVI2AP22794 236 aa5.4□□□□□ -1.54
GARNL3-212ENST00000463005 RPS10P46783 165 aaKnown RBP5.4□□□□□ -1.54
GARNL3-212ENST00000463005 SLAQ13239 276 aa5.4□□□□□ -1.54
GARNL3-212ENST00000463005 CFAP126Q5VTH2 177 aa5.4□□□□□ -1.54
GARNL3-212ENST00000463005 VSIG2Q96IQ7 327 aa5.4□□□□□ -1.54
GARNL3-212ENST00000463005 PRADC1Q9BSG0 188 aa5.4□□□□□ -1.54
GARNL3-212ENST00000463005 JPT2Q9H910 190 aa5.4□□□□□ -1.54
GARNL3-212ENST00000463005 TRAPPC1Q9Y5R8 145 aa5.4□□□□□ -1.54
GARNL3-212ENST00000463005 A0A1B0GXF2 115 aa5.39□□□□□ -1.55
GARNL3-212ENST00000463005 APCSP02743 223 aa5.39□□□□□ -1.55
GARNL3-212ENST00000463005 CKS2P33552 79 aa5.39□□□□□ -1.55
GARNL3-212ENST00000463005 FABP9Q0Z7S8 132 aa5.39□□□□□ -1.55
GARNL3-212ENST00000463005 ZFP2Q6ZN57 461 aa5.39□□□□□ -1.55
GARNL3-212ENST00000463005 AMN1Q8IY45 258 aa5.39□□□□□ -1.55
GARNL3-212ENST00000463005 ZNF479Q96JC4 524 aa5.39□□□□□ -1.55
GARNL3-212ENST00000463005 GNB1LQ9BYB4 327 aa5.39□□□□□ -1.55
GARNL3-212ENST00000463005 TNFRSF18Q9Y5U5 241 aa5.39□□□□□ -1.55
GARNL3-212ENST00000463005 ICOSQ9Y6W8 199 aa5.39□□□□□ -1.55
GARNL3-212ENST00000463005 VPS13BQ7Z7G8 4022 aa5.39□□□□□ -1.55
GARNL3-212ENST00000463005 MYCBP2O75592 4640 aa5.38□□□□□ -1.55
GARNL3-212ENST00000463005 K7EQD1 137 aa5.38□□□□□ -1.55
GARNL3-212ENST00000463005 PPP1R17O96001 155 aa5.38□□□□□ -1.55
GARNL3-212ENST00000463005 DNAH10OSP0CZ25 163 aa5.38□□□□□ -1.55
GARNL3-212ENST00000463005 RAB5AP20339 215 aa5.38□□□□□ -1.55
GARNL3-212ENST00000463005 RHOHQ15669 191 aa5.38□□□□□ -1.55
GARNL3-212ENST00000463005 OR10J3Q5JRS4 329 aa5.38□□□□□ -1.55
GARNL3-212ENST00000463005 FAM104BQ5XKR9 115 aa5.38□□□□□ -1.55
GARNL3-212ENST00000463005 LYPD5Q6UWN5 251 aa5.38□□□□□ -1.55
GARNL3-212ENST00000463005 DEFB104AQ8WTQ1 72 aa5.38□□□□□ -1.55
GARNL3-212ENST00000463005 NTN5Q8WTR8 489 aaPredicted RBP5.38□□□□□ -1.55
GARNL3-212ENST00000463005 MRAP2Q96G30 205 aa5.38□□□□□ -1.55
GARNL3-212ENST00000463005 SAMD10Q9BYL1 202 aa5.38□□□□□ -1.55
GARNL3-212ENST00000463005 NCR2O95944 276 aa5.37□□□□□ -1.55
GARNL3-212ENST00000463005 PPBPP02775 128 aa5.37□□□□□ -1.55
GARNL3-212ENST00000463005 CRYGDP07320 174 aa5.37□□□□□ -1.55
GARNL3-212ENST00000463005 RPL36AP83881 106 aaKnown RBP5.37□□□□□ -1.55
GARNL3-212ENST00000463005 MRPL23Q16540 153 aaKnown RBP5.37□□□□□ -1.55
GARNL3-212ENST00000463005 TMEM136Q6ZRR5 245 aa5.37□□□□□ -1.55
GARNL3-212ENST00000463005 ORMDL3Q8N138 153 aa5.37□□□□□ -1.55
GARNL3-212ENST00000463005 RPL36ALQ969Q0 106 aaKnown RBP5.37□□□□□ -1.55
GARNL3-212ENST00000463005 PRO0255Q9UI72 69 aa5.37□□□□□ -1.55
GARNL3-212ENST00000463005 HHLA3Q9XRX5 114 aa5.37□□□□□ -1.55
GARNL3-212ENST00000463005 IGLV5-52A0A0A0MRZ9 124 aa5.36□□□□□ -1.55
GARNL3-212ENST00000463005 TRAV26-2A0A0B4J265 109 aa5.36□□□□□ -1.55
GARNL3-212ENST00000463005 D6R8Y8 96 aa5.36□□□□□ -1.55
GARNL3-212ENST00000463005 GATA1P15976 413 aaPredicted RBP5.36□□□□□ -1.55
GARNL3-212ENST00000463005 RAB4AP20338 218 aa5.36□□□□□ -1.55
GARNL3-212ENST00000463005 KIAA1644Q3SXP7 199 aa5.36□□□□□ -1.55
GARNL3-212ENST00000463005 MRPL51Q4U2R6 128 aaKnown RBP5.36□□□□□ -1.55
GARNL3-212ENST00000463005 NEGR1Q7Z3B1 354 aa5.36□□□□□ -1.55
GARNL3-212ENST00000463005 C10orf126Q8N4M7 172 aa5.36□□□□□ -1.55
GARNL3-212ENST00000463005 GATD1Q8NB37 220 aa5.36□□□□□ -1.55
GARNL3-212ENST00000463005 PRELID3AQ96N28 172 aa5.36□□□□□ -1.55
GARNL3-212ENST00000463005 TRBV10-1A0A0K0K1A3 114 aa5.35□□□□□ -1.55
GARNL3-212ENST00000463005 TRBV6-4A0A1B0GX49 114 aa5.35□□□□□ -1.55
GARNL3-212ENST00000463005 GAGE12JA6NER3 117 aa5.35□□□□□ -1.55
GARNL3-212ENST00000463005 COLCA2A8K830 154 aa5.35□□□□□ -1.55
GARNL3-212ENST00000463005 C1orf196B1AJZ1 125 aa5.35□□□□□ -1.55
GARNL3-212ENST00000463005 SMKR1H3BMG3 65 aa5.35□□□□□ -1.55
GARNL3-212ENST00000463005 SRIP30626 198 aa5.35□□□□□ -1.55
GARNL3-212ENST00000463005 GAGE1Q13065 139 aa5.35□□□□□ -1.55
GARNL3-212ENST00000463005 GAGE4Q13068 117 aa5.35□□□□□ -1.55
GARNL3-212ENST00000463005 GAGE5Q13069 117 aa5.35□□□□□ -1.55
GARNL3-212ENST00000463005 SLC25A29Q8N8R3 303 aa5.35□□□□□ -1.55
GARNL3-212ENST00000463005 DNAJC30Q96LL9 226 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms