RNA–Protein interactions for RNA: ENST00000462597.1

PDLIM4-204, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 767 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-204ENST00000462597 TMEM97Q5BJF2 176 aa12.54□□□□□ -0.4
PDLIM4-204ENST00000462597 NTM-AS1Q6ZSK4 140 aa12.54□□□□□ -0.4
PDLIM4-204ENST00000462597 CBLN2Q8IUK8 224 aa12.54□□□□□ -0.4
PDLIM4-204ENST00000462597 PPBPP02775 128 aa12.53□□□□□ -0.4
PDLIM4-204ENST00000462597 KRTAP10-2P60368 255 aa12.53□□□□□ -0.4
PDLIM4-204ENST00000462597 COTL1Q14019 142 aa12.53□□□□□ -0.4
PDLIM4-204ENST00000462597 ORMDL3Q8N138 153 aa12.53□□□□□ -0.4
PDLIM4-204ENST00000462597 TMEM70Q9BUB7 260 aa12.53□□□□□ -0.4
PDLIM4-204ENST00000462597 TRBV25-1A0A075B6N4 114 aa12.52□□□□□ -0.41
PDLIM4-204ENST00000462597 HLA-DQA1P01909 254 aa12.52□□□□□ -0.41
PDLIM4-204ENST00000462597 SUMO2P61956 95 aaKnown RBP12.52□□□□□ -0.41
PDLIM4-204ENST00000462597 Q6ZRN7 208 aaPredicted RBP12.52□□□□□ -0.41
PDLIM4-204ENST00000462597 APOBP04114 4563 aaKnown RBP12.51□□□□□ -0.41
PDLIM4-204ENST00000462597 IGHV1-24A0A0C4DH33 117 aa12.51□□□□□ -0.41
PDLIM4-204ENST00000462597 TNFRSF6BO95407 300 aa12.51□□□□□ -0.41
PDLIM4-204ENST00000462597 NPYP01303 97 aa12.51□□□□□ -0.41
PDLIM4-204ENST00000462597 DNAH10OSP0CZ25 163 aa12.51□□□□□ -0.41
PDLIM4-204ENST00000462597 PMCHP20382 165 aa12.51□□□□□ -0.41
PDLIM4-204ENST00000462597 COX19Q49B96 90 aa12.51□□□□□ -0.41
PDLIM4-204ENST00000462597 PRELID3AQ96N28 172 aa12.51□□□□□ -0.41
PDLIM4-204ENST00000462597 GNB1LQ9BYB4 327 aa12.51□□□□□ -0.41
PDLIM4-204ENST00000462597 SMCO4Q9NRQ5 59 aa12.51□□□□□ -0.41
PDLIM4-204ENST00000462597 DNAH5Q8TE73 4624 aa12.5□□□□□ -0.41
PDLIM4-204ENST00000462597 TRBV24-1A0A075B6N3 115 aa12.5□□□□□ -0.41
PDLIM4-204ENST00000462597 I3L3M4 83 aa12.5□□□□□ -0.41
PDLIM4-204ENST00000462597 CDK2AP2O75956 126 aa12.5□□□□□ -0.41
PDLIM4-204ENST00000462597 IGHV3-30P01768 117 aa12.5□□□□□ -0.41
PDLIM4-204ENST00000462597 IGHV3-33P01772 117 aa12.5□□□□□ -0.41
PDLIM4-204ENST00000462597 APCSP02743 223 aa12.5□□□□□ -0.41
PDLIM4-204ENST00000462597 IGHV3-30-3P0DP02 117 aa12.5□□□□□ -0.41
PDLIM4-204ENST00000462597 IGHV3-30-5P0DP03 117 aa12.5□□□□□ -0.41
PDLIM4-204ENST00000462597 BTF3P20290 206 aaKnown RBP12.5□□□□□ -0.41
PDLIM4-204ENST00000462597 POLR2KP53803 58 aaKnown RBP12.5□□□□□ -0.41
PDLIM4-204ENST00000462597 LINC01556Q5JQF7 62 aa12.5□□□□□ -0.41
PDLIM4-204ENST00000462597 Q8N3U1 123 aa12.5□□□□□ -0.41
PDLIM4-204ENST00000462597 CHCHD5Q9BSY4 110 aa12.5□□□□□ -0.41
PDLIM4-204ENST00000462597 MT-ND6P03923 174 aa12.49□□□□□ -0.41
PDLIM4-204ENST00000462597 AMTP48728 403 aa12.49□□□□□ -0.41
PDLIM4-204ENST00000462597 IQCJQ1A5X6 159 aa12.49□□□□□ -0.41
PDLIM4-204ENST00000462597 KIAA1644Q3SXP7 199 aa12.49□□□□□ -0.41
PDLIM4-204ENST00000462597 NIT1Q86X76 327 aa12.49□□□□□ -0.41
PDLIM4-204ENST00000462597 YPEL4Q96NS1 127 aa12.49□□□□□ -0.41
PDLIM4-204ENST00000462597 C20orf78Q9BR46 151 aa12.49□□□□□ -0.41
PDLIM4-204ENST00000462597 TRBV27A0A0K0K1C4 114 aa12.48□□□□□ -0.41
PDLIM4-204ENST00000462597 PHOX2AO14813 284 aa12.48□□□□□ -0.41
PDLIM4-204ENST00000462597 FUSP35637 526 aaKnown RBP eCLIP12.48□□□□□ -0.41
PDLIM4-204ENST00000462597 TMEM243Q9BU79 118 aa12.48□□□□□ -0.41
PDLIM4-204ENST00000462597 MRPL18Q9H0U6 180 aaKnown RBP12.48□□□□□ -0.41
PDLIM4-204ENST00000462597 TRAV9-2A0A087WT02 112 aa12.47□□□□□ -0.41
PDLIM4-204ENST00000462597 TMEM262E9PQX1 116 aa12.47□□□□□ -0.41
PDLIM4-204ENST00000462597 VCYO14598 125 aa12.47□□□□□ -0.41
PDLIM4-204ENST00000462597 TSHBP01222 138 aa12.47□□□□□ -0.41
PDLIM4-204ENST00000462597 MAPKAPK5-AS1Q8N8E1 139 aa12.47□□□□□ -0.41
PDLIM4-204ENST00000462597 SMIM2Q9BVW6 85 aa12.47□□□□□ -0.41
PDLIM4-204ENST00000462597 LAMTOR2Q9Y2Q5 125 aa12.47□□□□□ -0.41
PDLIM4-204ENST00000462597 A0A087WX48 190 aa12.46□□□□□ -0.41
PDLIM4-204ENST00000462597 GAGE6Q13070 117 aa12.46□□□□□ -0.41
PDLIM4-204ENST00000462597 UBE2L6O14933 153 aa12.45□□□□□ -0.42
PDLIM4-204ENST00000462597 FCER1GP30273 86 aa12.45□□□□□ -0.42
PDLIM4-204ENST00000462597 RPL32P62910 135 aaKnown RBP12.45□□□□□ -0.42
PDLIM4-204ENST00000462597 FABP9Q0Z7S8 132 aa12.45□□□□□ -0.42
PDLIM4-204ENST00000462597 MPV17L2Q567V2 206 aa12.45□□□□□ -0.42
PDLIM4-204ENST00000462597 C10orf126Q8N4M7 172 aa12.45□□□□□ -0.42
PDLIM4-204ENST00000462597 KIR2DL4Q99706 377 aa12.45□□□□□ -0.42
PDLIM4-204ENST00000462597 MAP1LC3AQ9H492 121 aa12.45□□□□□ -0.42
PDLIM4-204ENST00000462597 TRAPPC1Q9Y5R8 145 aa12.45□□□□□ -0.42
PDLIM4-204ENST00000462597 LOC389332A0A1B0GUA5 103 aa12.44□□□□□ -0.42
PDLIM4-204ENST00000462597 PKIAP61925 76 aa12.44□□□□□ -0.42
PDLIM4-204ENST00000462597 CHCHD7Q9BUK0 85 aa12.44□□□□□ -0.42
PDLIM4-204ENST00000462597 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.43□□□□□ -0.42
PDLIM4-204ENST00000462597 IGKV2-29A2NJV5 120 aaPredicted RBP12.43□□□□□ -0.42
PDLIM4-204ENST00000462597 K7EP13 123 aa12.43□□□□□ -0.42
PDLIM4-204ENST00000462597 ATP6V1G1O75348 118 aa12.43□□□□□ -0.42
PDLIM4-204ENST00000462597 SCO1O75880 301 aa12.43□□□□□ -0.42
PDLIM4-204ENST00000462597 Q8N976 141 aa12.42□□□□□ -0.42
PDLIM4-204ENST00000462597 ALKBH7Q9BT30 221 aaPredicted RBP12.41□□□□□ -0.42
PDLIM4-204ENST00000462597 PRSS47A8MTI9 375 aa12.4□□□□□ -0.42
PDLIM4-204ENST00000462597 TCAPO15273 167 aa12.4□□□□□ -0.42
PDLIM4-204ENST00000462597 ESDP10768 282 aa12.4□□□□□ -0.42
PDLIM4-204ENST00000462597 RBX1P62877 108 aa12.4□□□□□ -0.42
PDLIM4-204ENST00000462597 NFE4Q86UQ8 179 aa12.4□□□□□ -0.42
PDLIM4-204ENST00000462597 KLK12Q9UKR0 248 aa12.4□□□□□ -0.42
PDLIM4-204ENST00000462597 IBA57-AS1B1ANH7 110 aa12.39□□□□□ -0.43
PDLIM4-204ENST00000462597 ANGP03950 147 aaKnown RBP12.39□□□□□ -0.43
PDLIM4-204ENST00000462597 Q9HAA7 133 aa12.39□□□□□ -0.43
PDLIM4-204ENST00000462597 A0A087WTM6 91 aa12.38□□□□□ -0.43
PDLIM4-204ENST00000462597 S100A1P23297 94 aa12.38□□□□□ -0.43
PDLIM4-204ENST00000462597 LAGE3Q14657 143 aa12.38□□□□□ -0.43
PDLIM4-204ENST00000462597 AMMECR1LQ6DCA0 310 aa12.38□□□□□ -0.43
PDLIM4-204ENST00000462597 Q8N8P6 123 aa12.38□□□□□ -0.43
PDLIM4-204ENST00000462597 H7C423 109 aa12.37□□□□□ -0.43
PDLIM4-204ENST00000462597 EREGO14944 169 aa12.37□□□□□ -0.43
PDLIM4-204ENST00000462597 FGF6P10767 208 aa12.37□□□□□ -0.43
PDLIM4-204ENST00000462597 RAB5AP20339 215 aa12.37□□□□□ -0.43
PDLIM4-204ENST00000462597 IFI27P40305 119 aaPredicted RBP12.37□□□□□ -0.43
PDLIM4-204ENST00000462597 RNASEKQ6P5S7 137 aaKnown RBP12.37□□□□□ -0.43
PDLIM4-204ENST00000462597 Q8N1X5 172 aa12.37□□□□□ -0.43
PDLIM4-204ENST00000462597 NXT2Q9NPJ8 142 aaKnown RBP12.37□□□□□ -0.43
PDLIM4-204ENST00000462597 IGLV4-60A0A075B6I1 120 aa12.36□□□□□ -0.43
PDLIM4-204ENST00000462597 A0A1B0GUV1 79 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms