RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-204	ENST00000461522	SAA2	P0DJI9	122 aa	Predicted RBP	2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	PYY	P10082	97 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	SLC25A6	P12236	298 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	ZNF138	P52744	262 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	SYNJ2BP	P57105	145 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	DIAPH2-AS1	Q14236	149 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	KIAA0087	Q14695	138 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	ADIRF	Q15847	76 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	KLK9	Q2XQG4	91 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	DEFB112	Q30KQ8	113 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	SP6	Q3SY56	376 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	COA6	Q5JTJ3	125 aa	Known RBP	2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	C9orf153	Q5TBE3	101 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	SLC25A34	Q6PIV7	304 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522		Q6ZUT4	128 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	PRNT	Q86SH4	94 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522		Q8N6K4	173 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	DPH3	Q96FX2	82 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	AQP10	Q96PS8	301 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	SMR3A	Q99954	134 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	NABP2	Q9BQ15	211 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	C16orf95	Q9H693	158 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	NAA60	Q9H7X0	242 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	SLC25A22	Q9H936	323 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	KLK9	Q9UKQ9	250 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	SVEP1	Q4LDE5	3571 aa		2.59	□□□□□ -1.99
UBA3-204	ENST00000461522	SETD2	Q9BYW2	2564 aa	Predicted RBP	2.58	□□□□□ -2
UBA3-204	ENST00000461522	TEP1	Q99973	2627 aa	Known RBP	2.58	□□□□□ -2
UBA3-204	ENST00000461522	C2CD3	Q4AC94	2353 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	ZFHX3	Q15911	3703 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	ARHGAP32	A7KAX9	2087 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	IGHV1OR15-1	A0A075B7D0	117 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	TRAV13-1	A0A0B4J241	112 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	CRYM-AS1	A6NIL9	109 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522		C9JQL5	133 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	TMEM262	E9PQX1	116 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	INS-IGF2	F8WCM5	200 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522		H3BQ15	152 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	UQCRQ	O14949	82 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	SEC11B	P0C7V7	166 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	SLC25A4	P12235	298 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	PTHLH	P12272	177 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	COX7A1	P24310	79 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	CXCL5	P42830	114 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	LINC00313	P59037	77 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	ZNF90	Q03938	601 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522		Q6AWC8	147 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	UNQ5815/PRO19632	Q6UWF5	114 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	BRD3OS	Q6XYD6	125 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	LCA10	Q71F78	164 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	RPP25L	Q8N5L8	163 aa	Known RBP	2.58	□□□□□ -2
UBA3-204	ENST00000461522	OR4X2	Q8NGF9	303 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	LSM10	Q969L4	123 aa	Known RBP	2.58	□□□□□ -2
UBA3-204	ENST00000461522	ZC2HC1A	Q96GY0	325 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	C18orf15	Q96N68	181 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	IMMP2L	Q96T52	175 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	PARP12	Q9H0J9	701 aa	Known RBP	2.58	□□□□□ -2
UBA3-204	ENST00000461522	SLC35B3	Q9H1N7	401 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	HILPDA	Q9Y5L2	63 aa		2.58	□□□□□ -2
UBA3-204	ENST00000461522	ZNF706	Q9Y5V0	76 aa	Predicted RBP	2.58	□□□□□ -2
UBA3-204	ENST00000461522	IGHV3-43	A0A0B4J1X8	118 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	C3orf85	A0A1B0GTC6	90 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	ZNF727	A8MUV8	499 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522		H3BMG7	143 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522		H3BUA1	57 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522		H3BUX3	64 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522		K7EP34	96 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	IGLV2-23	P01705	113 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	IGKV1-16	P04430	117 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	IGHV3-43D	P0DP04	118 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	CRISP2	P16562	243 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	NMU	P48645	174 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	KRTAP10-10	P60014	251 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	RPL23	P62829	140 aa	Known RBP	2.57	□□□□□ -2
UBA3-204	ENST00000461522	SEC11A	P67812	179 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	ATP5G2	Q06055	141 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	PMCHL1	Q16048	86 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	SPATA45	Q537H7	98 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522		Q56UQ5	140 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	RPL39P5	Q59GN2	51 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	EBLN2	Q6P2I7	272 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	ZNF818P	Q6ZRF7	136 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	ATOH7	Q8N100	152 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	DYNAP	Q8N1N2	210 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	RNF182	Q8N6D2	247 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	SIGLECL1	Q8N7X8	197 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	C5orf56	Q8N8D9	126 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522		Q8N9W7	124 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	OR10P1	Q8NGE3	313 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	ATP6V0E2	Q8NHE4	81 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	CMTM2	Q8TAZ6	248 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	TMEM167A	Q8TBQ9	72 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	DCANP1	Q8TF63	244 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	TMEM158	Q8WZ71	300 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	LEAP2	Q969E1	77 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	LINC00526	Q96FQ7	95 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	SLC25A2	Q9BXI2	301 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	NPVF	Q9HCQ7	196 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	CCL28	Q9NRJ3	127 aa		2.57	□□□□□ -2
UBA3-204	ENST00000461522	CR1	P17927	2039 aa		2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms