RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 ZNRF2Q8NHG8 242 aa6.98□□□□□ -1.29
SYN3-206ENST00000461446 RPL36ALQ969Q0 106 aaKnown RBP6.98□□□□□ -1.29
SYN3-206ENST00000461446 HIST1H2BLQ99880 126 aa6.98□□□□□ -1.29
SYN3-206ENST00000461446 TIRAPP58753 221 aa6.97□□□□□ -1.29
SYN3-206ENST00000461446 LINC00310P59036 64 aa6.97□□□□□ -1.29
SYN3-206ENST00000461446 OR10D4PQ8NGN7 298 aa6.97□□□□□ -1.29
SYN3-206ENST00000461446 CHCHD1Q96BP2 118 aaKnown RBP6.97□□□□□ -1.29
SYN3-206ENST00000461446 MRAP2Q96G30 205 aa6.97□□□□□ -1.29
SYN3-206ENST00000461446 DNAJC30Q96LL9 226 aa6.97□□□□□ -1.29
SYN3-206ENST00000461446 PACRGQ96M98 296 aaPredicted RBP6.97□□□□□ -1.29
SYN3-206ENST00000461446 MRPS16Q9Y3D3 137 aaKnown RBP6.97□□□□□ -1.29
SYN3-206ENST00000461446 TRAV26-2A0A0B4J265 109 aa6.96□□□□□ -1.3
SYN3-206ENST00000461446 PRSS29PA6NIE9 313 aa6.96□□□□□ -1.3
SYN3-206ENST00000461446 SMKR1H3BMG3 65 aa6.96□□□□□ -1.3
SYN3-206ENST00000461446 HSBP1O75506 76 aa6.96□□□□□ -1.3
SYN3-206ENST00000461446 LINC00614P0C842 121 aa6.96□□□□□ -1.3
SYN3-206ENST00000461446 UBE2D3P61077 147 aa6.96□□□□□ -1.3
SYN3-206ENST00000461446 UBE2D2P62837 147 aa6.96□□□□□ -1.3
SYN3-206ENST00000461446 RNASEKQ6P5S7 137 aaKnown RBP6.96□□□□□ -1.3
SYN3-206ENST00000461446 LINC00336Q6ZUF6 198 aa6.96□□□□□ -1.3
SYN3-206ENST00000461446 PRSS3P2Q8NHM4 247 aa6.96□□□□□ -1.3
SYN3-206ENST00000461446 UPK3BQ9BT76 320 aa6.96□□□□□ -1.3
SYN3-206ENST00000461446 GTSF1LQ9H1H1 148 aa6.96□□□□□ -1.3
SYN3-206ENST00000461446 MAP1LC3AQ9H492 121 aa6.96□□□□□ -1.3
SYN3-206ENST00000461446 NIT2Q9NQR4 276 aa6.96□□□□□ -1.3
SYN3-206ENST00000461446 A0A1B0GVY2 172 aa6.95□□□□□ -1.3
SYN3-206ENST00000461446 TNFRSF6BO95407 300 aa6.95□□□□□ -1.3
SYN3-206ENST00000461446 NCR2O95944 276 aa6.95□□□□□ -1.3
SYN3-206ENST00000461446 PPP1R17O96001 155 aa6.95□□□□□ -1.3
SYN3-206ENST00000461446 NPYP01303 97 aa6.95□□□□□ -1.3
SYN3-206ENST00000461446 PMCHP20382 165 aa6.95□□□□□ -1.3
SYN3-206ENST00000461446 FA2HQ7L5A8 372 aa6.95□□□□□ -1.3
SYN3-206ENST00000461446 TNFRSF18Q9Y5U5 241 aa6.95□□□□□ -1.3
SYN3-206ENST00000461446 FAT2Q9NYQ8 4349 aa6.95□□□□□ -1.3
SYN3-206ENST00000461446 DNAH2Q9P225 4427 aa6.95□□□□□ -1.3
SYN3-206ENST00000461446 NBDYA0A0U1RRE5 68 aa6.94□□□□□ -1.3
SYN3-206ENST00000461446 PRSS47A8MTI9 375 aa6.94□□□□□ -1.3
SYN3-206ENST00000461446 AMTP48728 403 aa6.94□□□□□ -1.3
SYN3-206ENST00000461446 LELP1Q5T871 98 aa6.94□□□□□ -1.3
SYN3-206ENST00000461446 C1orf134Q5TEV5 83 aa6.94□□□□□ -1.3
SYN3-206ENST00000461446 DAZ4Q86SG3 579 aaKnown RBP6.94□□□□□ -1.3
SYN3-206ENST00000461446 RPL39LQ96EH5 51 aaKnown RBP6.94□□□□□ -1.3
SYN3-206ENST00000461446 URB1-AS1Q96HZ7 61 aa6.94□□□□□ -1.3
SYN3-206ENST00000461446 Q9H8V8 135 aa6.94□□□□□ -1.3
SYN3-206ENST00000461446 DAZ3Q9NR90 486 aaKnown RBP6.94□□□□□ -1.3
SYN3-206ENST00000461446 IGHV3-38A0A0C4DH36 116 aa6.93□□□□□ -1.3
SYN3-206ENST00000461446 LOC389332A0A1B0GUA5 103 aa6.93□□□□□ -1.3
SYN3-206ENST00000461446 GAS8-AS1O95177 125 aa6.93□□□□□ -1.3
SYN3-206ENST00000461446 SMIM6P0DI80 62 aa6.93□□□□□ -1.3
SYN3-206ENST00000461446 IFI27P40305 119 aaPredicted RBP6.93□□□□□ -1.3
SYN3-206ENST00000461446 NRACQ8N912 160 aa6.93□□□□□ -1.3
SYN3-206ENST00000461446 NXT2Q9NPJ8 142 aaKnown RBP6.93□□□□□ -1.3
SYN3-206ENST00000461446 AP5S1Q9NUS5 200 aa6.93□□□□□ -1.3
SYN3-206ENST00000461446 TRAV8-6A0A0B4J262 113 aa6.92□□□□□ -1.3
SYN3-206ENST00000461446 TRBV6-5A0A0K0K1A5 114 aa6.92□□□□□ -1.3
SYN3-206ENST00000461446 SIVA1O15304 175 aa6.92□□□□□ -1.3
SYN3-206ENST00000461446 WFDC10BQ8IUB3 73 aa6.92□□□□□ -1.3
SYN3-206ENST00000461446 LINC00518Q8N0U6 118 aa6.92□□□□□ -1.3
SYN3-206ENST00000461446 FAM19A2Q8N3H0 131 aa6.92□□□□□ -1.3
SYN3-206ENST00000461446 Q8N8P6 123 aa6.92□□□□□ -1.3
SYN3-206ENST00000461446 C20orf78Q9BR46 151 aa6.92□□□□□ -1.3
SYN3-206ENST00000461446 KRTAP1-5Q9BYS1 174 aa6.92□□□□□ -1.3
SYN3-206ENST00000461446 HECTD4Q9Y4D8 3996 aa6.92□□□□□ -1.3
SYN3-206ENST00000461446 TRBV6-8A0A0A6YYG3 113 aa6.91□□□□□ -1.3
SYN3-206ENST00000461446 TNP2Q05952 138 aa6.91□□□□□ -1.3
SYN3-206ENST00000461446 JOSD1Q15040 202 aaPredicted RBP6.91□□□□□ -1.3
SYN3-206ENST00000461446 TMEM97Q5BJF2 176 aa6.91□□□□□ -1.3
SYN3-206ENST00000461446 NTM-AS1Q6ZSK4 140 aa6.91□□□□□ -1.3
SYN3-206ENST00000461446 ST20Q9HBF5 79 aa6.91□□□□□ -1.3
SYN3-206ENST00000461446 DNAH17Q9UFH2 4485 aa6.91□□□□□ -1.3
SYN3-206ENST00000461446 IGHV1-24A0A0C4DH33 117 aa6.9□□□□□ -1.3
SYN3-206ENST00000461446 SDHAF1A6NFY7 115 aa6.9□□□□□ -1.3
SYN3-206ENST00000461446 LINC01546A6NGU7 62 aa6.9□□□□□ -1.3
SYN3-206ENST00000461446 DNAH10OSP0CZ25 163 aa6.9□□□□□ -1.3
SYN3-206ENST00000461446 POLR2KP53803 58 aaKnown RBP6.9□□□□□ -1.3
SYN3-206ENST00000461446 SUMO2P61956 95 aaKnown RBP6.9□□□□□ -1.3
SYN3-206ENST00000461446 RPL32P62910 135 aaKnown RBP6.9□□□□□ -1.3
SYN3-206ENST00000461446 PYY3Q5JQD4 70 aa6.9□□□□□ -1.3
SYN3-206ENST00000461446 C6orf223Q8N319 242 aa6.9□□□□□ -1.3
SYN3-206ENST00000461446 C12orf57Q99622 126 aa6.9□□□□□ -1.3
SYN3-206ENST00000461446 K7EMI3 77 aa6.89□□□□□ -1.31
SYN3-206ENST00000461446 LEPROTL1O95214 131 aa6.89□□□□□ -1.31
SYN3-206ENST00000461446 TMEM70Q9BUB7 260 aa6.89□□□□□ -1.31
SYN3-206ENST00000461446 SMIM2Q9BVW6 85 aa6.89□□□□□ -1.31
SYN3-206ENST00000461446 PKHD1P08F94 4074 aa6.89□□□□□ -1.31
SYN3-206ENST00000461446 KIAA1109Q2LD37 5005 aa6.88□□□□□ -1.31
SYN3-206ENST00000461446 TRBV25-1A0A075B6N4 114 aa6.88□□□□□ -1.31
SYN3-206ENST00000461446 TRBV27A0A0K0K1C4 114 aa6.88□□□□□ -1.31
SYN3-206ENST00000461446 I3L3M4 83 aa6.88□□□□□ -1.31
SYN3-206ENST00000461446 K7EP13 123 aa6.88□□□□□ -1.31
SYN3-206ENST00000461446 VCYO14598 125 aa6.88□□□□□ -1.31
SYN3-206ENST00000461446 HBDP02042 147 aa6.88□□□□□ -1.31
SYN3-206ENST00000461446 FCER1GP30273 86 aa6.88□□□□□ -1.31
SYN3-206ENST00000461446 COTL1Q14019 142 aa6.88□□□□□ -1.31
SYN3-206ENST00000461446 PMCHL1Q16048 86 aa6.88□□□□□ -1.31
SYN3-206ENST00000461446 TTC32Q5I0X7 151 aa6.88□□□□□ -1.31
SYN3-206ENST00000461446 LINC01556Q5JQF7 62 aa6.88□□□□□ -1.31
SYN3-206ENST00000461446 DEFB104AQ8WTQ1 72 aa6.88□□□□□ -1.31
SYN3-206ENST00000461446 HSPB8Q9UJY1 196 aa6.88□□□□□ -1.31
SYN3-206ENST00000461446 TRAV9-2A0A087WT02 112 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms