RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 GAGE5Q13069 117 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 COTL1Q14019 142 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 UFSP1Q6NVU6 142 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 SLC25A34Q6PIV7 304 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 Q6ZSN1 163 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 ERASQ7Z444 233 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 PRIMA1Q86XR5 153 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 RPL36ALQ969Q0 106 aaKnown RBP4.88□□□□□ -1.63
MSH2-204ENST00000461394 TMEM141Q96I45 108 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 EDA2RQ9HAV5 297 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 ZMAT5Q9UDW3 170 aaKnown RBP4.88□□□□□ -1.63
MSH2-204ENST00000461394 TRAV12-1A0A0B4J245 112 aa4.87□□□□□ -1.63
MSH2-204ENST00000461394 M0R143 59 aa4.87□□□□□ -1.63
MSH2-204ENST00000461394 IGHV4-30-4P0DP06 118 aa4.87□□□□□ -1.63
MSH2-204ENST00000461394 PLNP26678 52 aa4.87□□□□□ -1.63
MSH2-204ENST00000461394 CTAG1AP78358 180 aa4.87□□□□□ -1.63
MSH2-204ENST00000461394 STPG4Q8N801 248 aa4.87□□□□□ -1.63
MSH2-204ENST00000461394 OR11H2Q8NH07 326 aa4.87□□□□□ -1.63
MSH2-204ENST00000461394 KIR2DL5BQ8NHK3 375 aa4.87□□□□□ -1.63
MSH2-204ENST00000461394 BAALCQ8WXS3 180 aa4.87□□□□□ -1.63
MSH2-204ENST00000461394 OVOL2Q9BRP0 275 aa4.87□□□□□ -1.63
MSH2-204ENST00000461394 PRADC1Q9BSG0 188 aa4.87□□□□□ -1.63
MSH2-204ENST00000461394 MRPL35Q9NZE8 188 aaKnown RBP4.87□□□□□ -1.63
MSH2-204ENST00000461394 SETXQ7Z333 2677 aaKnown RBP4.87□□□□□ -1.63
MSH2-204ENST00000461394 CUBNO60494 3623 aa4.86□□□□□ -1.63
MSH2-204ENST00000461394 TRBV10-1A0A0K0K1A3 114 aa4.86□□□□□ -1.63
MSH2-204ENST00000461394 PLAC8L1A1L4L8 177 aa4.86□□□□□ -1.63
MSH2-204ENST00000461394 F8VRH5 84 aa4.86□□□□□ -1.63
MSH2-204ENST00000461394 DEFB4AO15263 64 aa4.86□□□□□ -1.63
MSH2-204ENST00000461394 CIDEAO60543 219 aa4.86□□□□□ -1.63
MSH2-204ENST00000461394 PMVKQ15126 192 aa4.86□□□□□ -1.63
MSH2-204ENST00000461394 TMEM97Q5BJF2 176 aa4.86□□□□□ -1.63
MSH2-204ENST00000461394 PAPPA-AS1Q5QFB9 102 aa4.86□□□□□ -1.63
MSH2-204ENST00000461394 C20orf203Q8NBC4 194 aa4.86□□□□□ -1.63
MSH2-204ENST00000461394 TIMM17AQ99595 171 aa4.86□□□□□ -1.63
MSH2-204ENST00000461394 HIVEP1P15822 2718 aa4.86□□□□□ -1.63
MSH2-204ENST00000461394 NOTCH2Q04721 2471 aa4.85□□□□□ -1.63
MSH2-204ENST00000461394 TRBV7-3A0A075B6L6 115 aa4.85□□□□□ -1.63
MSH2-204ENST00000461394 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.85□□□□□ -1.63
MSH2-204ENST00000461394 IGKV2-29A2NJV5 120 aaPredicted RBP4.85□□□□□ -1.63
MSH2-204ENST00000461394 UBE2L6O14933 153 aa4.85□□□□□ -1.63
MSH2-204ENST00000461394 COX8AP10176 69 aa4.85□□□□□ -1.63
MSH2-204ENST00000461394 HERVK_113P61574 105 aa4.85□□□□□ -1.63
MSH2-204ENST00000461394 DAD1P61803 113 aa4.85□□□□□ -1.63
MSH2-204ENST00000461394 ZC2HC1BQ5TFG8 222 aa4.85□□□□□ -1.63
MSH2-204ENST00000461394 FAM222AQ5U5X8 452 aa4.85□□□□□ -1.63
MSH2-204ENST00000461394 SLC25A29Q8N8R3 303 aa4.85□□□□□ -1.63
MSH2-204ENST00000461394 VCX2Q9H322 139 aa4.85□□□□□ -1.63
MSH2-204ENST00000461394 Q9UF83 564 aa4.85□□□□□ -1.63
MSH2-204ENST00000461394 NSD1Q96L73 2696 aaPredicted RBP4.84□□□□□ -1.63
MSH2-204ENST00000461394 F8P00451 2351 aa4.84□□□□□ -1.63
MSH2-204ENST00000461394 C2CD3Q4AC94 2353 aa4.84□□□□□ -1.63
MSH2-204ENST00000461394 IGHV4-28A0A0C4DH34 117 aa4.84□□□□□ -1.63
MSH2-204ENST00000461394 LOC100131303A0A0U1RQF7 123 aa4.84□□□□□ -1.63
MSH2-204ENST00000461394 IGIPA6NJ69 53 aa4.84□□□□□ -1.63
MSH2-204ENST00000461394 LYRM9A8MSI8 78 aa4.84□□□□□ -1.63
MSH2-204ENST00000461394 WIPF1O43516 503 aa4.84□□□□□ -1.63
MSH2-204ENST00000461394 MIFP14174 115 aa4.84□□□□□ -1.63
MSH2-204ENST00000461394 GCSHP23434 173 aa4.84□□□□□ -1.63
MSH2-204ENST00000461394 TIRAPP58753 221 aa4.84□□□□□ -1.63
MSH2-204ENST00000461394 KRTAP10-11P60412 298 aa4.84□□□□□ -1.63
MSH2-204ENST00000461394 SMAGPQ0VAQ4 97 aa4.84□□□□□ -1.63
MSH2-204ENST00000461394 TMEM170BQ5T4T1 132 aa4.84□□□□□ -1.63
MSH2-204ENST00000461394 AMMECR1LQ6DCA0 310 aa4.84□□□□□ -1.63
MSH2-204ENST00000461394 DAZ4Q86SG3 579 aaKnown RBP4.84□□□□□ -1.63
MSH2-204ENST00000461394 OPRPNQ99935 248 aaPredicted RBP4.84□□□□□ -1.63
MSH2-204ENST00000461394 C2orf88Q9BSF0 95 aa4.84□□□□□ -1.63
MSH2-204ENST00000461394 CST9LQ9H4G1 147 aa4.84□□□□□ -1.63
MSH2-204ENST00000461394 DAZ3Q9NR90 486 aaKnown RBP4.84□□□□□ -1.63
MSH2-204ENST00000461394 TP73-AS1Q9UF72 201 aa4.84□□□□□ -1.63
MSH2-204ENST00000461394 NF1P21359 2839 aa4.83□□□□□ -1.64
MSH2-204ENST00000461394 IGLV4-3A0A075B6K6 122 aa4.83□□□□□ -1.64
MSH2-204ENST00000461394 TRAV8-6A0A0B4J262 113 aa4.83□□□□□ -1.64
MSH2-204ENST00000461394 TRBV6-4A0A1B0GX49 114 aa4.83□□□□□ -1.64
MSH2-204ENST00000461394 HTN3P15516 51 aa4.83□□□□□ -1.64
MSH2-204ENST00000461394 HINT1P49773 126 aaPredicted RBP4.83□□□□□ -1.64
MSH2-204ENST00000461394 UBE2D3P61077 147 aa4.83□□□□□ -1.64
MSH2-204ENST00000461394 UBE2D2P62837 147 aa4.83□□□□□ -1.64
MSH2-204ENST00000461394 FHL2Q14192 279 aa4.83□□□□□ -1.64
MSH2-204ENST00000461394 RNASE13Q5GAN3 156 aaKnown RBP4.83□□□□□ -1.64
MSH2-204ENST00000461394 CEMP1Q6PRD7 247 aaPredicted RBP4.83□□□□□ -1.64
MSH2-204ENST00000461394 MRPL52Q86TS9 123 aaKnown RBP4.83□□□□□ -1.64
MSH2-204ENST00000461394 RNF183Q96D59 192 aa4.83□□□□□ -1.64
MSH2-204ENST00000461394 TMEM101Q96IK0 257 aa4.83□□□□□ -1.64
MSH2-204ENST00000461394 CHCHD7Q9BUK0 85 aa4.83□□□□□ -1.64
MSH2-204ENST00000461394 SNHG12Q9BXW3 62 aa4.83□□□□□ -1.64
MSH2-204ENST00000461394 SPANXA1Q9NS26 97 aa4.83□□□□□ -1.64
MSH2-204ENST00000461394 HHLA3Q9XRX5 114 aa4.83□□□□□ -1.64
MSH2-204ENST00000461394 MRPS16Q9Y3D3 137 aaKnown RBP4.83□□□□□ -1.64
MSH2-204ENST00000461394 TRBV25-1A0A075B6N4 114 aa4.82□□□□□ -1.64
MSH2-204ENST00000461394 C11orf86A6NJI1 115 aa4.82□□□□□ -1.64
MSH2-204ENST00000461394 G3V4G9 280 aa4.82□□□□□ -1.64
MSH2-204ENST00000461394 SPART-AS1P0CW21 52 aa4.82□□□□□ -1.64
MSH2-204ENST00000461394 PCP2Q8IVA1 136 aa4.82□□□□□ -1.64
MSH2-204ENST00000461394 TMEM243Q9BU79 118 aa4.82□□□□□ -1.64
MSH2-204ENST00000461394 CHAC1Q9BUX1 264 aa4.82□□□□□ -1.64
MSH2-204ENST00000461394 RETNQ9HD89 108 aa4.82□□□□□ -1.64
MSH2-204ENST00000461394 A0A0J9YXV3 536 aa4.81□□□□□ -1.64
MSH2-204ENST00000461394 A0A0J9YY99 117 aa4.81□□□□□ -1.64
MSH2-204ENST00000461394 F5H768 121 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms