RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 NDUFS6O75380 124 aaKnown RBP13.78□□□□□ -0.2
HMG20B-207ENST00000461099 MAJINQ3KP22 176 aa13.78□□□□□ -0.2
HMG20B-207ENST00000461099 F2Z2F3 143 aa13.77□□□□□ -0.21
HMG20B-207ENST00000461099 H2AFB1P0C5Y9 115 aa13.77□□□□□ -0.21
HMG20B-207ENST00000461099 AMTP48728 403 aa13.77□□□□□ -0.21
HMG20B-207ENST00000461099 COTL1Q14019 142 aa13.77□□□□□ -0.21
HMG20B-207ENST00000461099 PRSS3P2Q8NHM4 247 aa13.77□□□□□ -0.21
HMG20B-207ENST00000461099 IGKV2-24A0A0C4DH68 120 aa13.76□□□□□ -0.21
HMG20B-207ENST00000461099 TRGC1P0CF51 173 aa13.76□□□□□ -0.21
HMG20B-207ENST00000461099 PRR3P79522 188 aaKnown RBP13.76□□□□□ -0.21
HMG20B-207ENST00000461099 CENPWQ5EE01 88 aa13.76□□□□□ -0.21
HMG20B-207ENST00000461099 C11orf52Q96A22 123 aa13.76□□□□□ -0.21
HMG20B-207ENST00000461099 C19orf71A6NCJ1 209 aa13.75□□□□□ -0.21
HMG20B-207ENST00000461099 HIGD2BQ4VC39 106 aa13.75□□□□□ -0.21
HMG20B-207ENST00000461099 IGKV3OR2-268A0A0C4DH90 116 aa13.74□□□□□ -0.21
HMG20B-207ENST00000461099 XKRY2A2RUG3 117 aa13.74□□□□□ -0.21
HMG20B-207ENST00000461099 SMLR1H3BR10 107 aa13.74□□□□□ -0.21
HMG20B-207ENST00000461099 ZNF345Q14585 488 aa13.74□□□□□ -0.21
HMG20B-207ENST00000461099 ODF1Q14990 250 aa13.74□□□□□ -0.21
HMG20B-207ENST00000461099 LYZL1Q6UWQ5 148 aa13.74□□□□□ -0.21
HMG20B-207ENST00000461099 STPG4Q8N801 248 aa13.74□□□□□ -0.21
HMG20B-207ENST00000461099 NTF3P20783 257 aa13.73□□□□□ -0.21
HMG20B-207ENST00000461099 LYPD6BQ8NI32 183 aa13.73□□□□□ -0.21
HMG20B-207ENST00000461099 MANBALQ9NQG1 85 aa13.73□□□□□ -0.21
HMG20B-207ENST00000461099 CCL20P78556 96 aa13.72□□□□□ -0.21
HMG20B-207ENST00000461099 GNG13Q9P2W3 67 aa13.72□□□□□ -0.21
HMG20B-207ENST00000461099 A0A0J9YXV3 536 aa13.71□□□□□ -0.21
HMG20B-207ENST00000461099 IFNA1P01562 189 aa13.71□□□□□ -0.21
HMG20B-207ENST00000461099 CHCHD10Q8WYQ3 142 aaPredicted RBP13.71□□□□□ -0.21
HMG20B-207ENST00000461099 SMIM12Q96EX1 92 aa13.71□□□□□ -0.21
HMG20B-207ENST00000461099 GVQW2A0A096LPI5 108 aaPredicted RBP13.7□□□□□ -0.22
HMG20B-207ENST00000461099 RAB19A4D1S5 217 aa13.7□□□□□ -0.22
HMG20B-207ENST00000461099 GNG4P50150 75 aa13.7□□□□□ -0.22
HMG20B-207ENST00000461099 C9orf62Q8N4C0 152 aa13.7□□□□□ -0.22
HMG20B-207ENST00000461099 A0A096LNI7 61 aa13.69□□□□□ -0.22
HMG20B-207ENST00000461099 KRTAP10-8P60410 259 aa13.69□□□□□ -0.22
HMG20B-207ENST00000461099 AMMECR1LQ6DCA0 310 aa13.69□□□□□ -0.22
HMG20B-207ENST00000461099 BATF3Q9NR55 127 aa13.69□□□□□ -0.22
HMG20B-207ENST00000461099 SPINK6Q6UWN8 80 aa13.68□□□□□ -0.22
HMG20B-207ENST00000461099 GATD1Q8NB37 220 aa13.68□□□□□ -0.22
HMG20B-207ENST00000461099 LINC00474Q9P2X8 69 aa13.68□□□□□ -0.22
HMG20B-207ENST00000461099 KANTRA0A1W2PQU2 76 aa13.67□□□□□ -0.22
HMG20B-207ENST00000461099 HMSDA8MTL9 139 aa13.67□□□□□ -0.22
HMG20B-207ENST00000461099 BCL2L11O43521 198 aa13.67□□□□□ -0.22
HMG20B-207ENST00000461099 REG3GQ6UW15 175 aa13.67□□□□□ -0.22
HMG20B-207ENST00000461099 TRAV1-1A0A0B4J248 108 aa13.66□□□□□ -0.22
HMG20B-207ENST00000461099 CTRLP40313 264 aa13.66□□□□□ -0.22
HMG20B-207ENST00000461099 EIF5AP63241 154 aaKnown RBP13.66□□□□□ -0.22
HMG20B-207ENST00000461099 FOXI1Q12951 378 aa13.66□□□□□ -0.22
HMG20B-207ENST00000461099 TWIST1Q15672 202 aa13.66□□□□□ -0.22
HMG20B-207ENST00000461099 RNASEKQ6P5S7 137 aaKnown RBP13.66□□□□□ -0.22
HMG20B-207ENST00000461099 BIN3Q9NQY0 253 aa13.66□□□□□ -0.22
HMG20B-207ENST00000461099 TRAV26-2A0A0B4J265 109 aa13.65□□□□□ -0.22
HMG20B-207ENST00000461099 H7C423 109 aa13.65□□□□□ -0.22
HMG20B-207ENST00000461099 NCR2O95944 276 aa13.65□□□□□ -0.22
HMG20B-207ENST00000461099 Q6ZNX1 250 aa13.65□□□□□ -0.22
HMG20B-207ENST00000461099 TRBV20OR9-2A0A075B6H5 130 aa13.64□□□□□ -0.23
HMG20B-207ENST00000461099 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.64□□□□□ -0.23
HMG20B-207ENST00000461099 IGKV2-29A2NJV5 120 aaPredicted RBP13.64□□□□□ -0.23
HMG20B-207ENST00000461099 CNFNQ9BYD5 112 aa13.64□□□□□ -0.23
HMG20B-207ENST00000461099 PDE6DO43924 150 aa13.63□□□□□ -0.23
HMG20B-207ENST00000461099 FGF6P10767 208 aa13.63□□□□□ -0.23
HMG20B-207ENST00000461099 SRSF9Q13242 221 aaKnown RBP eCLIP13.63□□□□□ -0.23
HMG20B-207ENST00000461099 NUDT10Q8NFP7 164 aa13.63□□□□□ -0.23
HMG20B-207ENST00000461099 NUDT11Q96G61 164 aa13.63□□□□□ -0.23
HMG20B-207ENST00000461099 PKIGQ9Y2B9 76 aa13.63□□□□□ -0.23
HMG20B-207ENST00000461099 MEF2BQ02080 365 aaPredicted RBP13.62□□□□□ -0.23
HMG20B-207ENST00000461099 RPL39LQ96EH5 51 aaKnown RBP13.62□□□□□ -0.23
HMG20B-207ENST00000461099 APCSP02743 223 aa13.61□□□□□ -0.23
HMG20B-207ENST00000461099 XCL1P47992 114 aa13.61□□□□□ -0.23
HMG20B-207ENST00000461099 RGS21Q2M5E4 152 aa13.61□□□□□ -0.23
HMG20B-207ENST00000461099 Q6ZRP5 223 aa13.61□□□□□ -0.23
HMG20B-207ENST00000461099 OR5A1Q8NGJ0 315 aa13.61□□□□□ -0.23
HMG20B-207ENST00000461099 MED9Q9NWA0 146 aa13.61□□□□□ -0.23
HMG20B-207ENST00000461099 TEX46H3BTG2 121 aa13.6□□□□□ -0.23
HMG20B-207ENST00000461099 LINC00526Q96FQ7 95 aa13.6□□□□□ -0.23
HMG20B-207ENST00000461099 IGHV1-58A0A0C4DH39 117 aa13.59□□□□□ -0.23
HMG20B-207ENST00000461099 ZNF25P17030 456 aaPredicted RBP13.59□□□□□ -0.23
HMG20B-207ENST00000461099 CARD19Q96LW7 228 aa13.59□□□□□ -0.23
HMG20B-207ENST00000461099 LINC00959A0A1B0GUT2 108 aa13.58□□□□□ -0.24
HMG20B-207ENST00000461099 SDHAF1A6NFY7 115 aa13.58□□□□□ -0.24
HMG20B-207ENST00000461099 TEX261Q6UWH6 196 aa13.58□□□□□ -0.24
HMG20B-207ENST00000461099 RPP21Q9H633 154 aaKnown RBP13.58□□□□□ -0.24
HMG20B-207ENST00000461099 CCL25O15444 150 aa13.57□□□□□ -0.24
HMG20B-207ENST00000461099 FOXA3P55318 350 aaPredicted RBP13.57□□□□□ -0.24
HMG20B-207ENST00000461099 SMIM15Q7Z3B0 74 aa13.57□□□□□ -0.24
HMG20B-207ENST00000461099 TMEM101Q96IK0 257 aa13.57□□□□□ -0.24
HMG20B-207ENST00000461099 BTF3L4Q96K17 158 aa13.57□□□□□ -0.24
HMG20B-207ENST00000461099 FAM231BA6NCW3 169 aa13.56□□□□□ -0.24
HMG20B-207ENST00000461099 RNASE7Q9H1E1 156 aaKnown RBP13.56□□□□□ -0.24
HMG20B-207ENST00000461099 I3L3M4 83 aa13.55□□□□□ -0.24
HMG20B-207ENST00000461099 PMCHP20382 165 aa13.55□□□□□ -0.24
HMG20B-207ENST00000461099 ZNF561-AS1K7EIQ3 104 aa13.54□□□□□ -0.24
HMG20B-207ENST00000461099 SYCNQ0VAF6 134 aa13.54□□□□□ -0.24
HMG20B-207ENST00000461099 K7EN84 100 aa13.53□□□□□ -0.24
HMG20B-207ENST00000461099 BCL2P10415 239 aa13.53□□□□□ -0.24
HMG20B-207ENST00000461099 SS18Q15532 418 aa13.53□□□□□ -0.24
HMG20B-207ENST00000461099 EIF5AL1Q6IS14 154 aaKnown RBP13.53□□□□□ -0.24
HMG20B-207ENST00000461099 GAS8-AS1O95177 125 aa13.52□□□□□ -0.25
HMG20B-207ENST00000461099 ESDP10768 282 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms