RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 LAGE3Q14657 143 aa11.87□□□□□ -0.51
NELFCD-201ENST00000460601 ZNRF2Q8NHG8 242 aa11.87□□□□□ -0.51
NELFCD-201ENST00000460601 C18orf15Q96N68 181 aa11.87□□□□□ -0.51
NELFCD-201ENST00000460601 TM2D3Q9BRN9 247 aa11.87□□□□□ -0.51
NELFCD-201ENST00000460601 MEGF8Q7Z7M0 2845 aa11.86□□□□□ -0.51
NELFCD-201ENST00000460601 C20orf202A1L168 122 aa11.86□□□□□ -0.51
NELFCD-201ENST00000460601 GAGE12JA6NER3 117 aa11.86□□□□□ -0.51
NELFCD-201ENST00000460601 VCYO14598 125 aa11.86□□□□□ -0.51
NELFCD-201ENST00000460601 LEPROTL1O95214 131 aa11.86□□□□□ -0.51
NELFCD-201ENST00000460601 GAGE4Q13068 117 aa11.86□□□□□ -0.51
NELFCD-201ENST00000460601 GAGE5Q13069 117 aa11.86□□□□□ -0.51
NELFCD-201ENST00000460601 C21orf62-AS1Q17RA5 79 aa11.86□□□□□ -0.51
NELFCD-201ENST00000460601 GAGE13Q4V321 117 aa11.86□□□□□ -0.51
NELFCD-201ENST00000460601 HBDP02042 147 aa11.85□□□□□ -0.51
NELFCD-201ENST00000460601 KIR2DL4Q99706 377 aa11.85□□□□□ -0.51
NELFCD-201ENST00000460601 HHLA3Q9XRX5 114 aa11.85□□□□□ -0.51
NELFCD-201ENST00000460601 NUDT3O95989 172 aa11.84□□□□□ -0.51
NELFCD-201ENST00000460601 TSHBP01222 138 aa11.84□□□□□ -0.51
NELFCD-201ENST00000460601 HTN3P15516 51 aa11.84□□□□□ -0.51
NELFCD-201ENST00000460601 HNRNPA3P51991 378 aaKnown RBP11.84□□□□□ -0.51
NELFCD-201ENST00000460601 SPATA25Q9BR10 227 aa11.84□□□□□ -0.51
NELFCD-201ENST00000460601 MRPS16Q9Y3D3 137 aaKnown RBP11.84□□□□□ -0.51
NELFCD-201ENST00000460601 TRBV7-3A0A075B6L6 115 aa11.84□□□□□ -0.51
NELFCD-201ENST00000460601 TRBV6-4A0A1B0GX49 114 aa11.84□□□□□ -0.51
NELFCD-201ENST00000460601 RPL32P62910 135 aaKnown RBP11.84□□□□□ -0.51
NELFCD-201ENST00000460601 STPG4Q8N801 248 aa11.84□□□□□ -0.51
NELFCD-201ENST00000460601 H0Y8G0 127 aa11.83□□□□□ -0.52
NELFCD-201ENST00000460601 I3L3M4 83 aa11.83□□□□□ -0.52
NELFCD-201ENST00000460601 C3orf79P0CE67 100 aa11.83□□□□□ -0.52
NELFCD-201ENST00000460601 FCER1GP30273 86 aa11.83□□□□□ -0.52
NELFCD-201ENST00000460601 PRKDCP78527 4128 aaKnown RBP11.83□□□□□ -0.52
NELFCD-201ENST00000460601 C12orf74Q32Q52 190 aa11.83□□□□□ -0.52
NELFCD-201ENST00000460601 Q6ZN92 141 aa11.83□□□□□ -0.52
NELFCD-201ENST00000460601 A0A0J9YY99 117 aa11.83□□□□□ -0.52
NELFCD-201ENST00000460601 RPL39P62891 51 aaKnown RBP11.83□□□□□ -0.52
NELFCD-201ENST00000460601 SPATA12Q7Z6I5 190 aa11.83□□□□□ -0.52
NELFCD-201ENST00000460601 K7EP13 123 aa11.82□□□□□ -0.52
NELFCD-201ENST00000460601 C11orf68Q9H3H3 251 aaKnown RBP11.82□□□□□ -0.52
NELFCD-201ENST00000460601 DNAH9Q9NYC9 4486 aa11.82□□□□□ -0.52
NELFCD-201ENST00000460601 TRBV10-1A0A0K0K1A3 114 aa11.81□□□□□ -0.52
NELFCD-201ENST00000460601 CRYBA4P53673 196 aa11.81□□□□□ -0.52
NELFCD-201ENST00000460601 PTTG1IPP53801 180 aa11.81□□□□□ -0.52
NELFCD-201ENST00000460601 RPL36AP83881 106 aaKnown RBP11.81□□□□□ -0.52
NELFCD-201ENST00000460601 RHOHQ15669 191 aa11.81□□□□□ -0.52
NELFCD-201ENST00000460601 ORMDL2Q53FV1 153 aa11.81□□□□□ -0.52
NELFCD-201ENST00000460601 RPL36ALQ969Q0 106 aaKnown RBP11.81□□□□□ -0.52
NELFCD-201ENST00000460601 CIDEAO60543 219 aa11.81□□□□□ -0.52
NELFCD-201ENST00000460601 ATP5G1P05496 136 aa11.81□□□□□ -0.52
NELFCD-201ENST00000460601 Q6ZTC4 211 aa11.81□□□□□ -0.52
NELFCD-201ENST00000460601 DNAJC30Q96LL9 226 aa11.81□□□□□ -0.52
NELFCD-201ENST00000460601 F5H768 121 aa11.8□□□□□ -0.52
NELFCD-201ENST00000460601 UBE2D3P61077 147 aa11.8□□□□□ -0.52
NELFCD-201ENST00000460601 UBE2D2P62837 147 aa11.8□□□□□ -0.52
NELFCD-201ENST00000460601 RBX1P62877 108 aa11.8□□□□□ -0.52
NELFCD-201ENST00000460601 UBE2V1Q13404 147 aa11.8□□□□□ -0.52
NELFCD-201ENST00000460601 C2orf66Q6UXQ4 117 aa11.8□□□□□ -0.52
NELFCD-201ENST00000460601 CCL25O15444 150 aa11.8□□□□□ -0.52
NELFCD-201ENST00000460601 NANOS2P60321 138 aaKnown RBP11.8□□□□□ -0.52
NELFCD-201ENST00000460601 VSIG2Q96IQ7 327 aa11.8□□□□□ -0.52
NELFCD-201ENST00000460601 PRO0255Q9UI72 69 aa11.8□□□□□ -0.52
NELFCD-201ENST00000460601 TRAV26-1A0A087WT03 109 aa11.79□□□□□ -0.52
NELFCD-201ENST00000460601 A0A096LPF7 62 aa11.79□□□□□ -0.52
NELFCD-201ENST00000460601 GYPEP15421 78 aa11.79□□□□□ -0.52
NELFCD-201ENST00000460601 PRADC1Q9BSG0 188 aa11.79□□□□□ -0.52
NELFCD-201ENST00000460601 COX11Q9Y6N1 276 aa11.79□□□□□ -0.52
NELFCD-201ENST00000460601 K7EMI3 77 aa11.78□□□□□ -0.52
NELFCD-201ENST00000460601 HSPB8Q9UJY1 196 aa11.78□□□□□ -0.52
NELFCD-201ENST00000460601 NTM-AS1Q6ZSK4 140 aa11.78□□□□□ -0.52
NELFCD-201ENST00000460601 TOMM6Q96B49 74 aa11.78□□□□□ -0.52
NELFCD-201ENST00000460601 PAX4O43316 350 aa11.77□□□□□ -0.52
NELFCD-201ENST00000460601 PMCHL2Q9BQD1 86 aa11.77□□□□□ -0.52
NELFCD-201ENST00000460601 SYS1-DBNDD2H3BUS1 97 aa11.77□□□□□ -0.53
NELFCD-201ENST00000460601 COTL1Q14019 142 aa11.77□□□□□ -0.53
NELFCD-201ENST00000460601 C11orf45Q8TAV5 145 aa11.77□□□□□ -0.53
NELFCD-201ENST00000460601 IFI27L1Q96BM0 104 aa11.77□□□□□ -0.53
NELFCD-201ENST00000460601 CHCHD7Q9BUK0 85 aa11.77□□□□□ -0.53
NELFCD-201ENST00000460601 ZMAT4Q9H898 229 aa11.77□□□□□ -0.53
NELFCD-201ENST00000460601 STAB2Q8WWQ8 2551 aa11.76□□□□□ -0.53
NELFCD-201ENST00000460601 LINC00694P0DN24 101 aa11.76□□□□□ -0.53
NELFCD-201ENST00000460601 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.75□□□□□ -0.53
NELFCD-201ENST00000460601 TRAV9-2A0A087WT02 112 aa11.75□□□□□ -0.53
NELFCD-201ENST00000460601 TEX48A0A1B0GUV7 120 aa11.75□□□□□ -0.53
NELFCD-201ENST00000460601 IGKV2-29A2NJV5 120 aaPredicted RBP11.75□□□□□ -0.53
NELFCD-201ENST00000460601 CEMP1Q6PRD7 247 aaPredicted RBP11.75□□□□□ -0.53
NELFCD-201ENST00000460601 B9D2Q9BPU9 175 aa11.75□□□□□ -0.53
NELFCD-201ENST00000460601 MAP1LC3CQ9BXW4 147 aa11.75□□□□□ -0.53
NELFCD-201ENST00000460601 CYSLTR1Q9Y271 337 aa11.75□□□□□ -0.53
NELFCD-201ENST00000460601 DAZ4Q86SG3 579 aaKnown RBP11.75□□□□□ -0.53
NELFCD-201ENST00000460601 ATOH7Q8N100 152 aa11.75□□□□□ -0.53
NELFCD-201ENST00000460601 C20orf203Q8NBC4 194 aa11.75□□□□□ -0.53
NELFCD-201ENST00000460601 SCGB3A1Q96QR1 104 aa11.75□□□□□ -0.53
NELFCD-201ENST00000460601 OPRPNQ99935 248 aaPredicted RBP11.75□□□□□ -0.53
NELFCD-201ENST00000460601 DAZ3Q9NR90 486 aaKnown RBP11.75□□□□□ -0.53
NELFCD-201ENST00000460601 HINT1P49773 126 aaPredicted RBP11.73□□□□□ -0.53
NELFCD-201ENST00000460601 ZC2HC1BQ5TFG8 222 aa11.73□□□□□ -0.53
NELFCD-201ENST00000460601 IGIPA6NJ69 53 aa11.72□□□□□ -0.53
NELFCD-201ENST00000460601 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.71□□□□□ -0.53
NELFCD-201ENST00000460601 PRSS1P07477 247 aa11.71□□□□□ -0.53
NELFCD-201ENST00000460601 ERASQ7Z444 233 aa11.71□□□□□ -0.53
NELFCD-201ENST00000460601 ATP6V0E2Q8NHE4 81 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms