RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 ERASQ7Z444 233 aa4.17□□□□□ -1.74
RNU1-88P-201ENST00000459274 NRACQ8N912 160 aa4.17□□□□□ -1.74
RNU1-88P-201ENST00000459274 Q8NAQ8 132 aa4.17□□□□□ -1.74
RNU1-88P-201ENST00000459274 IFI27L1Q96BM0 104 aa4.17□□□□□ -1.74
RNU1-88P-201ENST00000459274 TMEM141Q96I45 108 aa4.17□□□□□ -1.74
RNU1-88P-201ENST00000459274 B9D2Q9BPU9 175 aa4.17□□□□□ -1.74
RNU1-88P-201ENST00000459274 C2orf88Q9BSF0 95 aa4.17□□□□□ -1.74
RNU1-88P-201ENST00000459274 VCX2Q9H322 139 aa4.17□□□□□ -1.74
RNU1-88P-201ENST00000459274 DEFB131BA0A096LNP1 70 aa4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 TRAV10A0A0B4J240 114 aa4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 PLAC8L1A1L4L8 177 aa4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 TMEM262E9PQX1 116 aa4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 H3BNG1 76 aa4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 SMIM6P0DI80 62 aa4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 CRYBA4P53673 196 aa4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 POLR2KP53803 58 aaKnown RBP4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 LINC00315P59091 139 aa4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 SEC11AP67812 179 aa4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 FHL2Q14192 279 aa4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 PET117Q6UWS5 81 aa4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 C15orf53Q8NAA6 179 aa4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 NEXN-AS1Q8NBZ9 246 aa4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 PHLDA1Q8WV24 401 aaPredicted RBP4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 TOMM6Q96B49 74 aa4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 TM2D3Q9BRN9 247 aa4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 CHCHD5Q9BSY4 110 aa4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 TMEM243Q9BU79 118 aa4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 GTSF1LQ9H1H1 148 aa4.16□□□□□ -1.74
RNU1-88P-201ENST00000459274 TRAV26-1A0A087WT03 109 aa4.15□□□□□ -1.75
RNU1-88P-201ENST00000459274 A0A087WX48 190 aa4.15□□□□□ -1.75
RNU1-88P-201ENST00000459274 A0A0J9YY99 117 aa4.15□□□□□ -1.75
RNU1-88P-201ENST00000459274 LOC105371267A0A1B0GV96 52 aa4.15□□□□□ -1.75
RNU1-88P-201ENST00000459274 LINC01546A6NGU7 62 aa4.15□□□□□ -1.75
RNU1-88P-201ENST00000459274 NPSP0C0P6 89 aa4.15□□□□□ -1.75
RNU1-88P-201ENST00000459274 DEFA6Q01524 100 aa4.15□□□□□ -1.75
RNU1-88P-201ENST00000459274 UFSP1Q6NVU6 142 aa4.15□□□□□ -1.75
RNU1-88P-201ENST00000459274 TEX43Q6ZNM6 134 aa4.15□□□□□ -1.75
RNU1-88P-201ENST00000459274 LINC00612Q8N6U2 182 aa4.15□□□□□ -1.75
RNU1-88P-201ENST00000459274 OR5A1Q8NGJ0 315 aa4.15□□□□□ -1.75
RNU1-88P-201ENST00000459274 RETNQ9HD89 108 aa4.15□□□□□ -1.75
RNU1-88P-201ENST00000459274 SPANXA1Q9NS26 97 aa4.15□□□□□ -1.75
RNU1-88P-201ENST00000459274 KLK5Q9Y337 293 aaPredicted RBP4.15□□□□□ -1.75
RNU1-88P-201ENST00000459274 CSMD1Q96PZ7 3565 aa4.15□□□□□ -1.75
RNU1-88P-201ENST00000459274 VPS13CQ709C8 3753 aa4.15□□□□□ -1.75
RNU1-88P-201ENST00000459274 ZNF469Q96JG9 3925 aaPredicted RBP4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 IGHV3-38A0A0C4DH36 116 aa4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 TSTD3H0UI37 97 aa4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 SYS1-DBNDD2H3BUS1 97 aa4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 NUPR1O60356 82 aa4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 P0DMU3 169 aa4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 FAM231AP0DMU4 169 aa4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 FAM231CP0DMU5 169 aa4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 ZNF25P17030 456 aaPredicted RBP4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 PLNP26678 52 aa4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 CCL18P55774 89 aa4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 UBE2D3P61077 147 aa4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 HERVK_113P61574 105 aa4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 UBE2D2P62837 147 aa4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 JOSD1Q15040 202 aaPredicted RBP4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 C20orf203Q8NBC4 194 aa4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 TIMM17AQ99595 171 aa4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 VAMP8Q9BV40 100 aa4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 GEMIN7Q9H840 131 aaKnown RBP4.14□□□□□ -1.75
RNU1-88P-201ENST00000459274 NIPBLQ6KC79 2804 aaeCLIP4.13□□□□□ -1.75
RNU1-88P-201ENST00000459274 TRBV6-8A0A0A6YYG3 113 aa4.13□□□□□ -1.75
RNU1-88P-201ENST00000459274 GAS8-AS1O95177 125 aa4.13□□□□□ -1.75
RNU1-88P-201ENST00000459274 C3orf79P0CE67 100 aa4.13□□□□□ -1.75
RNU1-88P-201ENST00000459274 PMVKQ15126 192 aa4.13□□□□□ -1.75
RNU1-88P-201ENST00000459274 C12orf74Q32Q52 190 aa4.13□□□□□ -1.75
RNU1-88P-201ENST00000459274 C12orf57Q99622 126 aa4.13□□□□□ -1.75
RNU1-88P-201ENST00000459274 TIMM21Q9BVV7 248 aa4.13□□□□□ -1.75
RNU1-88P-201ENST00000459274 CHTOPQ9Y3Y2 248 aaKnown RBP4.13□□□□□ -1.75
RNU1-88P-201ENST00000459274 PYGO1Q9Y3Y4 419 aa4.13□□□□□ -1.75
RNU1-88P-201ENST00000459274 IGLV2-18A0A075B6J9 118 aa4.12□□□□□ -1.75
RNU1-88P-201ENST00000459274 TRAV9-2A0A087WT02 112 aa4.12□□□□□ -1.75
RNU1-88P-201ENST00000459274 TRAV12-1A0A0B4J245 112 aa4.12□□□□□ -1.75
RNU1-88P-201ENST00000459274 NUPR2A6NF83 97 aa4.12□□□□□ -1.75
RNU1-88P-201ENST00000459274 H3BRM9 83 aa4.12□□□□□ -1.75
RNU1-88P-201ENST00000459274 DPM2O94777 84 aa4.12□□□□□ -1.75
RNU1-88P-201ENST00000459274 TSHBP01222 138 aa4.12□□□□□ -1.75
RNU1-88P-201ENST00000459274 IGKCP01834 107 aa4.12□□□□□ -1.75
RNU1-88P-201ENST00000459274 NANOS2P60321 138 aaKnown RBP4.12□□□□□ -1.75
RNU1-88P-201ENST00000459274 SS18Q15532 418 aa4.12□□□□□ -1.75
RNU1-88P-201ENST00000459274 LGALS9CQ6DKI2 356 aa4.12□□□□□ -1.75
RNU1-88P-201ENST00000459274 Q6ZSN1 163 aa4.12□□□□□ -1.75
RNU1-88P-201ENST00000459274 Q6ZTC4 211 aa4.12□□□□□ -1.75
RNU1-88P-201ENST00000459274 SPATA12Q7Z6I5 190 aa4.12□□□□□ -1.75
RNU1-88P-201ENST00000459274 UBE2DNLQ8IWF7 75 aa4.12□□□□□ -1.75
RNU1-88P-201ENST00000459274 DEFB104AQ8WTQ1 72 aa4.12□□□□□ -1.75
RNU1-88P-201ENST00000459274 CELA1Q9UNI1 258 aa4.12□□□□□ -1.75
RNU1-88P-201ENST00000459274 CSDC2Q9Y534 153 aaKnown RBP4.12□□□□□ -1.75
RNU1-88P-201ENST00000459274 MAST4O15021 2626 aa4.11□□□□□ -1.75
RNU1-88P-201ENST00000459274 A0A096LPF7 62 aa4.11□□□□□ -1.75
RNU1-88P-201ENST00000459274 IFITM10A6NMD0 228 aa4.11□□□□□ -1.75
RNU1-88P-201ENST00000459274 IGLL5B9A064 214 aa4.11□□□□□ -1.75
RNU1-88P-201ENST00000459274 CCL25O15444 150 aa4.11□□□□□ -1.75
RNU1-88P-201ENST00000459274 CRPP02741 224 aa4.11□□□□□ -1.75
RNU1-88P-201ENST00000459274 FGF6P10767 208 aa4.11□□□□□ -1.75
RNU1-88P-201ENST00000459274 TCTAP57738 103 aa4.11□□□□□ -1.75
RNU1-88P-201ENST00000459274 TMEM170BQ5T4T1 132 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms