RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 TRBV25-1A0A075B6N4 114 aa11.5□□□□□ -0.57
TRIM39-211ENST00000458516 TRAV8-6A0A0B4J262 113 aa11.5□□□□□ -0.57
TRIM39-211ENST00000458516 IGHV1-24A0A0C4DH33 117 aa11.5□□□□□ -0.57
TRIM39-211ENST00000458516 HYDINQ4G0P3 5121 aa11.49□□□□□ -0.57
TRIM39-211ENST00000458516 LOC389332A0A1B0GUA5 103 aa11.48□□□□□ -0.57
TRIM39-211ENST00000458516 SIVA1O15304 175 aa11.48□□□□□ -0.57
TRIM39-211ENST00000458516 TRGC2P03986 189 aa11.48□□□□□ -0.57
TRIM39-211ENST00000458516 AMTP48728 403 aa11.48□□□□□ -0.57
TRIM39-211ENST00000458516 KIR2DL4Q99706 377 aa11.48□□□□□ -0.57
TRIM39-211ENST00000458516 CHCHD7Q9BUK0 85 aa11.48□□□□□ -0.57
TRIM39-211ENST00000458516 Q9H8V8 135 aa11.48□□□□□ -0.57
TRIM39-211ENST00000458516 KMT2AQ03164 3969 aa11.48□□□□□ -0.57
TRIM39-211ENST00000458516 Q8N8P6 123 aa11.47□□□□□ -0.57
TRIM39-211ENST00000458516 TMEM243Q9BU79 118 aa11.47□□□□□ -0.57
TRIM39-211ENST00000458516 KMT2CQ8NEZ4 4911 aaKnown RBP11.46□□□□□ -0.57
TRIM39-211ENST00000458516 TCAPO15273 167 aa11.46□□□□□ -0.57
TRIM39-211ENST00000458516 DNAH10OSP0CZ25 163 aa11.46□□□□□ -0.57
TRIM39-211ENST00000458516 ESDP10768 282 aa11.46□□□□□ -0.57
TRIM39-211ENST00000458516 FCER1GP30273 86 aa11.46□□□□□ -0.57
TRIM39-211ENST00000458516 NIT1Q86X76 327 aa11.46□□□□□ -0.57
TRIM39-211ENST00000458516 C18orf32Q8TCD1 76 aa11.46□□□□□ -0.57
TRIM39-211ENST00000458516 CHCHD5Q9BSY4 110 aa11.46□□□□□ -0.57
TRIM39-211ENST00000458516 IFI27P40305 119 aaPredicted RBP11.45□□□□□ -0.58
TRIM39-211ENST00000458516 LINC01556Q5JQF7 62 aa11.45□□□□□ -0.58
TRIM39-211ENST00000458516 Q8N3U1 123 aa11.45□□□□□ -0.58
TRIM39-211ENST00000458516 NXT2Q9NPJ8 142 aaKnown RBP11.45□□□□□ -0.58
TRIM39-211ENST00000458516 GAGE6Q13070 117 aa11.44□□□□□ -0.58
TRIM39-211ENST00000458516 RYR2Q92736 4967 aa11.43□□□□□ -0.58
TRIM39-211ENST00000458516 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.43□□□□□ -0.58
TRIM39-211ENST00000458516 IGKV2-29A2NJV5 120 aaPredicted RBP11.43□□□□□ -0.58
TRIM39-211ENST00000458516 IGHV3-30P01768 117 aa11.43□□□□□ -0.58
TRIM39-211ENST00000458516 IGHV3-33P01772 117 aa11.43□□□□□ -0.58
TRIM39-211ENST00000458516 IGHV3-30-3P0DP02 117 aa11.43□□□□□ -0.58
TRIM39-211ENST00000458516 IGHV3-30-5P0DP03 117 aa11.43□□□□□ -0.58
TRIM39-211ENST00000458516 MPV17L2Q567V2 206 aa11.42□□□□□ -0.58
TRIM39-211ENST00000458516 PRSS3P2Q8NHM4 247 aa11.42□□□□□ -0.58
TRIM39-211ENST00000458516 KRTAP1-5Q9BYS1 174 aa11.42□□□□□ -0.58
TRIM39-211ENST00000458516 NBDYA0A0U1RRE5 68 aa11.41□□□□□ -0.58
TRIM39-211ENST00000458516 LINC01546A6NGU7 62 aa11.41□□□□□ -0.58
TRIM39-211ENST00000458516 TMEM262E9PQX1 116 aa11.41□□□□□ -0.58
TRIM39-211ENST00000458516 K7EMI3 77 aa11.41□□□□□ -0.58
TRIM39-211ENST00000458516 UBE2L6O14933 153 aa11.41□□□□□ -0.58
TRIM39-211ENST00000458516 PKIAP61925 76 aa11.41□□□□□ -0.58
TRIM39-211ENST00000458516 URB1-AS1Q96HZ7 61 aa11.41□□□□□ -0.58
TRIM39-211ENST00000458516 H7C423 109 aa11.4□□□□□ -0.58
TRIM39-211ENST00000458516 Q6ZR54 194 aa11.4□□□□□ -0.58
TRIM39-211ENST00000458516 C20orf203Q8NBC4 194 aa11.4□□□□□ -0.58
TRIM39-211ENST00000458516 A0A087WX48 190 aa11.39□□□□□ -0.59
TRIM39-211ENST00000458516 M0R2N4 97 aa11.39□□□□□ -0.59
TRIM39-211ENST00000458516 RBX1P62877 108 aa11.39□□□□□ -0.59
TRIM39-211ENST00000458516 LAGE3Q14657 143 aa11.39□□□□□ -0.59
TRIM39-211ENST00000458516 ORMDL2Q53FV1 153 aa11.39□□□□□ -0.59
TRIM39-211ENST00000458516 TTC32Q5I0X7 151 aa11.39□□□□□ -0.59
TRIM39-211ENST00000458516 FA2HQ7L5A8 372 aa11.39□□□□□ -0.59
TRIM39-211ENST00000458516 Q8N976 141 aa11.39□□□□□ -0.59
TRIM39-211ENST00000458516 A0A1B0GUV1 79 aa11.38□□□□□ -0.59
TRIM39-211ENST00000458516 FGF6P10767 208 aa11.38□□□□□ -0.59
TRIM39-211ENST00000458516 RPL39P62891 51 aaKnown RBP11.38□□□□□ -0.59
TRIM39-211ENST00000458516 IGLV4-60A0A075B6I1 120 aa11.37□□□□□ -0.59
TRIM39-211ENST00000458516 K7EP13 123 aa11.37□□□□□ -0.59
TRIM39-211ENST00000458516 Q0VG73 95 aa11.37□□□□□ -0.59
TRIM39-211ENST00000458516 MRPL52Q86TS9 123 aaKnown RBP11.37□□□□□ -0.59
TRIM39-211ENST00000458516 C10orf126Q8N4M7 172 aa11.37□□□□□ -0.59
TRIM39-211ENST00000458516 TMEM18Q96B42 140 aa11.37□□□□□ -0.59
TRIM39-211ENST00000458516 TRAV9-2A0A087WT02 112 aa11.36□□□□□ -0.59
TRIM39-211ENST00000458516 LINC00614P0C842 121 aa11.36□□□□□ -0.59
TRIM39-211ENST00000458516 AMMECR1LQ6DCA0 310 aa11.36□□□□□ -0.59
TRIM39-211ENST00000458516 RNASEKQ6P5S7 137 aaKnown RBP11.36□□□□□ -0.59
TRIM39-211ENST00000458516 AP5S1Q9NUS5 200 aa11.36□□□□□ -0.59
TRIM39-211ENST00000458516 KLK12Q9UKR0 248 aa11.36□□□□□ -0.59
TRIM39-211ENST00000458516 UBE2D4Q9Y2X8 147 aa11.36□□□□□ -0.59
TRIM39-211ENST00000458516 IBA57-AS1B1ANH7 110 aa11.35□□□□□ -0.59
TRIM39-211ENST00000458516 HIST1H2BKO60814 126 aa11.35□□□□□ -0.59
TRIM39-211ENST00000458516 ANGP03950 147 aaKnown RBP11.35□□□□□ -0.59
TRIM39-211ENST00000458516 HIST1H2BJP06899 126 aa11.35□□□□□ -0.59
TRIM39-211ENST00000458516 ZNF25P17030 456 aaPredicted RBP11.35□□□□□ -0.59
TRIM39-211ENST00000458516 HIST1H2BOP23527 126 aa11.35□□□□□ -0.59
TRIM39-211ENST00000458516 HIST1H2BBP33778 126 aa11.35□□□□□ -0.59
TRIM39-211ENST00000458516 HIST1H2BDP58876 126 aa11.35□□□□□ -0.59
TRIM39-211ENST00000458516 RAB5BP61020 215 aa11.35□□□□□ -0.59
TRIM39-211ENST00000458516 HIST1H2BCP62807 126 aa11.35□□□□□ -0.59
TRIM39-211ENST00000458516 HIST2H2BEQ16778 126 aa11.35□□□□□ -0.59
TRIM39-211ENST00000458516 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.35□□□□□ -0.59
TRIM39-211ENST00000458516 C2orf66Q6UXQ4 117 aa11.35□□□□□ -0.59
TRIM39-211ENST00000458516 HIST1H2BHQ93079 126 aa11.35□□□□□ -0.59
TRIM39-211ENST00000458516 HIST1H2BNQ99877 126 aa11.35□□□□□ -0.59
TRIM39-211ENST00000458516 HIST1H2BMQ99879 126 aa11.35□□□□□ -0.59
TRIM39-211ENST00000458516 TIMM21Q9BVV7 248 aa11.35□□□□□ -0.59
TRIM39-211ENST00000458516 CYSLTR1Q9Y271 337 aa11.34□□□□□ -0.59
TRIM39-211ENST00000458516 BTF3P20290 206 aaKnown RBP11.33□□□□□ -0.6
TRIM39-211ENST00000458516 LINC00310P59036 64 aa11.33□□□□□ -0.6
TRIM39-211ENST00000458516 BAGE3Q86Y29 109 aa11.33□□□□□ -0.6
TRIM39-211ENST00000458516 SPANXA1Q9NS26 97 aa11.33□□□□□ -0.6
TRIM39-211ENST00000458516 CSDC2Q9Y534 153 aaKnown RBP11.33□□□□□ -0.6
TRIM39-211ENST00000458516 A0A096LNJ9 63 aa11.32□□□□□ -0.6
TRIM39-211ENST00000458516 C1orf196B1AJZ1 125 aa11.32□□□□□ -0.6
TRIM39-211ENST00000458516 SMAGPQ0VAQ4 97 aa11.32□□□□□ -0.6
TRIM39-211ENST00000458516 OR5A1Q8NGJ0 315 aa11.32□□□□□ -0.6
TRIM39-211ENST00000458516 FAM104AQ969W3 186 aa11.32□□□□□ -0.6
TRIM39-211ENST00000458516 TOMM6Q96B49 74 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms