RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 PHLDA1Q8WV24 401 aaPredicted RBP8.74□□□□□ -1.01
SYNE2-207ENST00000458046 HIST1H4GQ99525 98 aa8.74□□□□□ -1.01
SYNE2-207ENST00000458046 F8VRH5 84 aa8.74□□□□□ -1.01
SYNE2-207ENST00000458046 RNASE3P12724 160 aaKnown RBP8.74□□□□□ -1.01
SYNE2-207ENST00000458046 CRIP2P52943 208 aaPredicted RBP8.74□□□□□ -1.01
SYNE2-207ENST00000458046 TOMM6Q96B49 74 aa8.74□□□□□ -1.01
SYNE2-207ENST00000458046 A0A0U1RQV1 116 aa8.73□□□□□ -1.01
SYNE2-207ENST00000458046 IGHG2P01859 326 aa8.73□□□□□ -1.01
SYNE2-207ENST00000458046 C2orf66Q6UXQ4 117 aa8.73□□□□□ -1.01
SYNE2-207ENST00000458046 USMG5Q96IX5 58 aa8.73□□□□□ -1.01
SYNE2-207ENST00000458046 C20orf78Q9BR46 151 aa8.73□□□□□ -1.01
SYNE2-207ENST00000458046 FN1P02751 2386 aaKnown RBP8.73□□□□□ -1.01
SYNE2-207ENST00000458046 A0A087WZ39 114 aa8.72□□□□□ -1.01
SYNE2-207ENST00000458046 FAM229AH3BQW9 127 aa8.72□□□□□ -1.01
SYNE2-207ENST00000458046 RPL24P83731 157 aaKnown RBP8.72□□□□□ -1.01
SYNE2-207ENST00000458046 DAZ2Q13117 558 aaKnown RBP8.72□□□□□ -1.01
SYNE2-207ENST00000458046 DAZ4Q86SG3 579 aaKnown RBP8.72□□□□□ -1.01
SYNE2-207ENST00000458046 NEXN-AS1Q8NBZ9 246 aa8.72□□□□□ -1.01
SYNE2-207ENST00000458046 DAZ1Q9NQZ3 744 aaKnown RBP8.72□□□□□ -1.01
SYNE2-207ENST00000458046 DAZ3Q9NR90 486 aaKnown RBP8.72□□□□□ -1.01
SYNE2-207ENST00000458046 UTP20O75691 2785 aaKnown RBP8.72□□□□□ -1.01
SYNE2-207ENST00000458046 TRAV12-1A0A0B4J245 112 aa8.72□□□□□ -1.01
SYNE2-207ENST00000458046 HLA-DRB4P13762 266 aa8.72□□□□□ -1.01
SYNE2-207ENST00000458046 HLA-DRB4X5D2U9 266 aa8.72□□□□□ -1.01
SYNE2-207ENST00000458046 AGRNO00468 2067 aa8.72□□□□□ -1.01
SYNE2-207ENST00000458046 A6NDX4 124 aa8.71□□□□□ -1.01
SYNE2-207ENST00000458046 MED14OSP0DP75 135 aa8.71□□□□□ -1.01
SYNE2-207ENST00000458046 C12orf74Q32Q52 190 aa8.71□□□□□ -1.01
SYNE2-207ENST00000458046 MEIG1Q5JSS6 88 aa8.71□□□□□ -1.01
SYNE2-207ENST00000458046 CSPG4Q6UVK1 2322 aa8.71□□□□□ -1.01
SYNE2-207ENST00000458046 FBN1P35555 2871 aaKnown RBP8.71□□□□□ -1.02
SYNE2-207ENST00000458046 IGHV4-30-2A0A087WSY4 118 aa8.71□□□□□ -1.02
SYNE2-207ENST00000458046 IGLL5B9A064 214 aa8.71□□□□□ -1.02
SYNE2-207ENST00000458046 PIK3CD-AS1Q5SR53 167 aa8.71□□□□□ -1.02
SYNE2-207ENST00000458046 CCL19Q99731 98 aa8.71□□□□□ -1.02
SYNE2-207ENST00000458046 RBM12B-AS1Q9P1G2 102 aa8.71□□□□□ -1.02
SYNE2-207ENST00000458046 CYSLTR1Q9Y271 337 aa8.71□□□□□ -1.02
SYNE2-207ENST00000458046 FLNCQ14315 2725 aa8.71□□□□□ -1.02
SYNE2-207ENST00000458046 MYMXA0A1B0GTQ4 84 aa8.7□□□□□ -1.02
SYNE2-207ENST00000458046 Q6ZVQ6 151 aa8.7□□□□□ -1.02
SYNE2-207ENST00000458046 HIVEP1P15822 2718 aa8.7□□□□□ -1.02
SYNE2-207ENST00000458046 TRAV12-3A0A0B4J271 114 aa8.7□□□□□ -1.02
SYNE2-207ENST00000458046 DUSP14O95147 198 aaKnown RBP8.7□□□□□ -1.02
SYNE2-207ENST00000458046 IGKV3-20P01619 116 aa8.7□□□□□ -1.02
SYNE2-207ENST00000458046 C10orf105Q8TEF2 133 aa8.7□□□□□ -1.02
SYNE2-207ENST00000458046 MTORP42345 2549 aa8.7□□□□□ -1.02
SYNE2-207ENST00000458046 AVPP01185 164 aa8.69□□□□□ -1.02
SYNE2-207ENST00000458046 NBPF19A0A087WUL8 3843 aa8.69□□□□□ -1.02
SYNE2-207ENST00000458046 MUC4Q99102 2169 aa8.69□□□□□ -1.02
SYNE2-207ENST00000458046 E9PLD3 99 aa8.69□□□□□ -1.02
SYNE2-207ENST00000458046 AMTNQ6UX39 209 aa8.69□□□□□ -1.02
SYNE2-207ENST00000458046 TEX48A0A1B0GUV7 120 aa8.68□□□□□ -1.02
SYNE2-207ENST00000458046 H3BMG7 143 aa8.68□□□□□ -1.02
SYNE2-207ENST00000458046 CD7P09564 240 aa8.68□□□□□ -1.02
SYNE2-207ENST00000458046 SLC25A16P16260 332 aa8.68□□□□□ -1.02
SYNE2-207ENST00000458046 LINC00315P59091 139 aa8.68□□□□□ -1.02
SYNE2-207ENST00000458046 C10orf99Q6UWK7 81 aa8.68□□□□□ -1.02
SYNE2-207ENST00000458046 KLHL30-AS1Q8NEE0 82 aa8.68□□□□□ -1.02
SYNE2-207ENST00000458046 TRBV7-3A0A075B6L6 115 aa8.68□□□□□ -1.02
SYNE2-207ENST00000458046 PLAC8L1A1L4L8 177 aa8.68□□□□□ -1.02
SYNE2-207ENST00000458046 H3BUA1 57 aa8.68□□□□□ -1.02
SYNE2-207ENST00000458046 IGLV1-40P01703 118 aa8.68□□□□□ -1.02
SYNE2-207ENST00000458046 FOXI2Q6ZQN5 318 aa8.68□□□□□ -1.02
SYNE2-207ENST00000458046 Q9HAA7 133 aa8.68□□□□□ -1.02
SYNE2-207ENST00000458046 KIF25-AS1Q9Y6Z4 181 aa8.68□□□□□ -1.02
SYNE2-207ENST00000458046 J3QQQ9 107 aa8.67□□□□□ -1.02
SYNE2-207ENST00000458046 RPL39P62891 51 aaKnown RBP8.67□□□□□ -1.02
SYNE2-207ENST00000458046 WFDC2Q14508 124 aa8.67□□□□□ -1.02
SYNE2-207ENST00000458046 KRTAP17-1Q9BYP8 105 aa8.67□□□□□ -1.02
SYNE2-207ENST00000458046 TRAV12-2A0A075B6T6 113 aa8.67□□□□□ -1.02
SYNE2-207ENST00000458046 J3QR89 54 aa8.67□□□□□ -1.02
SYNE2-207ENST00000458046 PAX4O43316 350 aa8.67□□□□□ -1.02
SYNE2-207ENST00000458046 NDUFC2O95298 119 aa8.67□□□□□ -1.02
SYNE2-207ENST00000458046 MSMBP08118 114 aa8.67□□□□□ -1.02
SYNE2-207ENST00000458046 ZNF688P0C7X2 276 aa8.67□□□□□ -1.02
SYNE2-207ENST00000458046 FAM74A4Q5TZK3 123 aa8.67□□□□□ -1.02
SYNE2-207ENST00000458046 SUMO4Q6EEV6 95 aa8.67□□□□□ -1.02
SYNE2-207ENST00000458046 LINC01587Q99440 93 aa8.67□□□□□ -1.02
SYNE2-207ENST00000458046 TRGV11A0A075B6L2 103 aa8.67□□□□□ -1.02
SYNE2-207ENST00000458046 ZNF815PA8K554 130 aa8.67□□□□□ -1.02
SYNE2-207ENST00000458046 KLLNB2CW77 178 aa8.67□□□□□ -1.02
SYNE2-207ENST00000458046 LINC01619G3V211 115 aa8.67□□□□□ -1.02
SYNE2-207ENST00000458046 TSHBP01222 138 aa8.67□□□□□ -1.02
SYNE2-207ENST00000458046 DCANP1Q8TF63 244 aa8.67□□□□□ -1.02
SYNE2-207ENST00000458046 SCGB1D4Q6XE38 83 aa8.66□□□□□ -1.02
SYNE2-207ENST00000458046 PPP1R17O96001 155 aa8.66□□□□□ -1.02
SYNE2-207ENST00000458046 SPINK8P0C7L1 97 aa8.66□□□□□ -1.02
SYNE2-207ENST00000458046 NSUN5P1Q3KNT7 163 aa8.66□□□□□ -1.02
SYNE2-207ENST00000458046 ZFP2Q6ZN57 461 aa8.66□□□□□ -1.02
SYNE2-207ENST00000458046 FAM236AA0A1B0GUQ0 79 aa8.65□□□□□ -1.02
SYNE2-207ENST00000458046 FAM236BA0A1B0GV22 79 aa8.65□□□□□ -1.02
SYNE2-207ENST00000458046 C11orf86A6NJI1 115 aa8.65□□□□□ -1.02
SYNE2-207ENST00000458046 SFTA2Q6UW10 78 aa8.65□□□□□ -1.02
SYNE2-207ENST00000458046 MDFICQ9P1T7 246 aa8.65□□□□□ -1.02
SYNE2-207ENST00000458046 ZANQ9Y493 2812 aa8.65□□□□□ -1.02
SYNE2-207ENST00000458046 SORL1Q92673 2214 aa8.65□□□□□ -1.03
SYNE2-207ENST00000458046 A0A1B0GWB2 263 aa8.65□□□□□ -1.03
SYNE2-207ENST00000458046 SRSF9Q13242 221 aaKnown RBP eCLIP8.65□□□□□ -1.03
SYNE2-207ENST00000458046 RRN3P1Q2M238 152 aa8.65□□□□□ -1.03
SYNE2-207ENST00000458046 SH2D6Q7Z4S9 175 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms