RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 AP3S2P59780 193 aa9.02□□□□□ -0.97
SF3B4-202ENST00000457312 SS18Q15532 418 aa9.02□□□□□ -0.97
SF3B4-202ENST00000457312 WFDC1Q9HC57 220 aa9.02□□□□□ -0.97
SF3B4-202ENST00000457312 BCL2L11O43521 198 aa9.01□□□□□ -0.97
SF3B4-202ENST00000457312 NHLH2Q02577 135 aa9.01□□□□□ -0.97
SF3B4-202ENST00000457312 Q86TA4 180 aa9.01□□□□□ -0.97
SF3B4-202ENST00000457312 EPDR1Q9UM22 224 aa9.01□□□□□ -0.97
SF3B4-202ENST00000457312 LINC00959A0A1B0GUT2 108 aa9□□□□□ -0.97
SF3B4-202ENST00000457312 H3BMQ9 156 aa9□□□□□ -0.97
SF3B4-202ENST00000457312 LINC00242Q5T6M2 205 aa9□□□□□ -0.97
SF3B4-202ENST00000457312 Q9H521 79 aa9□□□□□ -0.97
SF3B4-202ENST00000457312 VCX3AQ9NNX9 186 aa9□□□□□ -0.97
SF3B4-202ENST00000457312 DEFA3P59666 94 aa8.99□□□□□ -0.97
SF3B4-202ENST00000457312 KRTAP6-3Q3LI67 103 aa8.99□□□□□ -0.97
SF3B4-202ENST00000457312 AMMECR1LQ6DCA0 310 aa8.99□□□□□ -0.97
SF3B4-202ENST00000457312 C2orf48Q96LS8 159 aa8.99□□□□□ -0.97
SF3B4-202ENST00000457312 MUC21A0A140T8X8 626 aa8.98□□□□□ -0.97
SF3B4-202ENST00000457312 FAM25EA8MYX2 175 aa8.98□□□□□ -0.97
SF3B4-202ENST00000457312 HMGB3O15347 200 aaKnown RBP8.98□□□□□ -0.97
SF3B4-202ENST00000457312 ARL14EPLP0DKL9 152 aa8.98□□□□□ -0.97
SF3B4-202ENST00000457312 ESDP10768 282 aa8.98□□□□□ -0.97
SF3B4-202ENST00000457312 COTL1Q14019 142 aa8.98□□□□□ -0.97
SF3B4-202ENST00000457312 XP32Q5T750 250 aa8.98□□□□□ -0.97
SF3B4-202ENST00000457312 RNASEKQ6P5S7 137 aaKnown RBP8.98□□□□□ -0.97
SF3B4-202ENST00000457312 SUMO1P63165 101 aaKnown RBP8.97□□□□□ -0.97
SF3B4-202ENST00000457312 SUMO4Q6EEV6 95 aa8.97□□□□□ -0.97
SF3B4-202ENST00000457312 CD164L2Q6UWJ8 174 aa8.97□□□□□ -0.97
SF3B4-202ENST00000457312 NDUFB6O95139 128 aa8.96□□□□□ -0.98
SF3B4-202ENST00000457312 RAB32Q13637 225 aa8.96□□□□□ -0.98
SF3B4-202ENST00000457312 COX8CQ7Z4L0 72 aa8.96□□□□□ -0.98
SF3B4-202ENST00000457312 NUPR1O60356 82 aa8.95□□□□□ -0.98
SF3B4-202ENST00000457312 TNFRSF6BO95407 300 aa8.95□□□□□ -0.98
SF3B4-202ENST00000457312 MGPP08493 103 aa8.95□□□□□ -0.98
SF3B4-202ENST00000457312 SMIM17P0DL12 118 aa8.95□□□□□ -0.98
SF3B4-202ENST00000457312 FAM229BQ4G0N7 80 aa8.95□□□□□ -0.98
SF3B4-202ENST00000457312 DEDD2Q8WXF8 326 aa8.95□□□□□ -0.98
SF3B4-202ENST00000457312 AP1S3Q96PC3 154 aa8.95□□□□□ -0.98
SF3B4-202ENST00000457312 CTDSP1Q9GZU7 261 aa8.95□□□□□ -0.98
SF3B4-202ENST00000457312 RBM38Q9H0Z9 239 aaKnown RBP8.95□□□□□ -0.98
SF3B4-202ENST00000457312 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.94□□□□□ -0.98
SF3B4-202ENST00000457312 IGKV2-29A2NJV5 120 aaPredicted RBP8.94□□□□□ -0.98
SF3B4-202ENST00000457312 SNAI2O43623 268 aa8.94□□□□□ -0.98
SF3B4-202ENST00000457312 SPANXN1Q5VSR9 72 aa8.94□□□□□ -0.98
SF3B4-202ENST00000457312 RPL28P46779 137 aaKnown RBP8.93□□□□□ -0.98
SF3B4-202ENST00000457312 IL15RAQ13261 267 aa8.93□□□□□ -0.98
SF3B4-202ENST00000457312 A0A087WXM4 84 aa8.92□□□□□ -0.98
SF3B4-202ENST00000457312 A0A1B0GVG6 124 aa8.92□□□□□ -0.98
SF3B4-202ENST00000457312 A0A1W2PPV4 95 aa8.92□□□□□ -0.98
SF3B4-202ENST00000457312 A6NHS1 94 aa8.92□□□□□ -0.98
SF3B4-202ENST00000457312 MALP21145 153 aa8.92□□□□□ -0.98
SF3B4-202ENST00000457312 OR2D3Q8NGH3 330 aa8.92□□□□□ -0.98
SF3B4-202ENST00000457312 TLX1NBP0CAT3 122 aa8.91□□□□□ -0.98
SF3B4-202ENST00000457312 SSTP61278 116 aa8.91□□□□□ -0.98
SF3B4-202ENST00000457312 GAGE2EQ4V326 116 aa8.91□□□□□ -0.98
SF3B4-202ENST00000457312 RASL11AQ6T310 242 aa8.91□□□□□ -0.98
SF3B4-202ENST00000457312 IMMP2LQ96T52 175 aa8.91□□□□□ -0.98
SF3B4-202ENST00000457312 MRPL35Q9NZE8 188 aaKnown RBP8.91□□□□□ -0.98
SF3B4-202ENST00000457312 GAGE2DQ9UEU5 116 aa8.91□□□□□ -0.98
SF3B4-202ENST00000457312 IGKV2D-26A0A0A0MRZ7 120 aa8.9□□□□□ -0.98
SF3B4-202ENST00000457312 GCHFRP30047 84 aa8.9□□□□□ -0.98
SF3B4-202ENST00000457312 SPAG11BQ08648 103 aa8.9□□□□□ -0.98
SF3B4-202ENST00000457312 Q6ZNX1 250 aa8.9□□□□□ -0.98
SF3B4-202ENST00000457312 SMDT1Q9H4I9 107 aa8.9□□□□□ -0.98
SF3B4-202ENST00000457312 H7C423 109 aa8.89□□□□□ -0.99
SF3B4-202ENST00000457312 COX7A2LO14548 114 aa8.89□□□□□ -0.99
SF3B4-202ENST00000457312 CXCL1P09341 107 aa8.89□□□□□ -0.99
SF3B4-202ENST00000457312 OR5AL1P0C617 328 aa8.89□□□□□ -0.99
SF3B4-202ENST00000457312 CFC1P0CG37 223 aa8.89□□□□□ -0.99
SF3B4-202ENST00000457312 KRTAP20-1Q3LI63 56 aa8.89□□□□□ -0.99
SF3B4-202ENST00000457312 STAG3L2P0CL84 134 aa8.88□□□□□ -0.99
SF3B4-202ENST00000457312 STAG3L3P0CL85 134 aa8.88□□□□□ -0.99
SF3B4-202ENST00000457312 ZNF25P17030 456 aaPredicted RBP8.88□□□□□ -0.99
SF3B4-202ENST00000457312 NIT2Q9NQR4 276 aa8.88□□□□□ -0.99
SF3B4-202ENST00000457312 IGLV8-61A0A075B6I0 122 aa8.87□□□□□ -0.99
SF3B4-202ENST00000457312 G3V3Q6 166 aa8.87□□□□□ -0.99
SF3B4-202ENST00000457312 PEX7O00628 323 aa8.87□□□□□ -0.99
SF3B4-202ENST00000457312 NTF3P20783 257 aa8.87□□□□□ -0.99
SF3B4-202ENST00000457312 PYDC2Q56P42 97 aa8.87□□□□□ -0.99
SF3B4-202ENST00000457312 ZFP30Q9Y2G7 519 aa8.87□□□□□ -0.99
SF3B4-202ENST00000457312 LRRC37A5PQ49AS3 106 aa8.86□□□□□ -0.99
SF3B4-202ENST00000457312 C10orf25Q5T742 122 aa8.86□□□□□ -0.99
SF3B4-202ENST00000457312 BCE1O60756 84 aa8.85□□□□□ -0.99
SF3B4-202ENST00000457312 CDC34P49427 236 aaPredicted RBP8.85□□□□□ -0.99
SF3B4-202ENST00000457312 PCOTHQ58A44 107 aa8.84□□□□□ -0.99
SF3B4-202ENST00000457312 C9orf129Q5T035 196 aaKnown RBP8.84□□□□□ -0.99
SF3B4-202ENST00000457312 DAND5Q8N907 189 aa8.84□□□□□ -0.99
SF3B4-202ENST00000457312 C6orf48Q9UBA6 75 aa8.84□□□□□ -0.99
SF3B4-202ENST00000457312 UBE2D4Q9Y2X8 147 aa8.84□□□□□ -0.99
SF3B4-202ENST00000457312 APCSP02743 223 aa8.83□□□□□ -1
SF3B4-202ENST00000457312 CTRLP40313 264 aa8.83□□□□□ -1
SF3B4-202ENST00000457312 BTF3L4Q96K17 158 aa8.83□□□□□ -1
SF3B4-202ENST00000457312 V9GYH0 126 aa8.83□□□□□ -1
SF3B4-202ENST00000457312 NCR2O95944 276 aa8.82□□□□□ -1
SF3B4-202ENST00000457312 BTCP35070 178 aa8.82□□□□□ -1
SF3B4-202ENST00000457312 SPAG11AQ6PDA7 123 aa8.82□□□□□ -1
SF3B4-202ENST00000457312 COX6B2Q6YFQ2 88 aa8.82□□□□□ -1
SF3B4-202ENST00000457312 C3orf22Q8N5N4 141 aa8.82□□□□□ -1
SF3B4-202ENST00000457312 TMEM101Q96IK0 257 aa8.82□□□□□ -1
SF3B4-202ENST00000457312 TMEM167BQ9NRX6 74 aa8.82□□□□□ -1
SF3B4-202ENST00000457312 A0A1W2PRE2 83 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms