RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 RPL36ALQ969Q0 106 aaKnown RBP6.54□□□□□ -1.36
PTCHD1-202ENST00000456522 NIT2Q9NQR4 276 aa6.54□□□□□ -1.36
PTCHD1-202ENST00000456522 ICOSQ9Y6W8 199 aa6.54□□□□□ -1.36
PTCHD1-202ENST00000456522 TRBV7-3A0A075B6L6 115 aa6.53□□□□□ -1.36
PTCHD1-202ENST00000456522 SRIP30626 198 aa6.53□□□□□ -1.36
PTCHD1-202ENST00000456522 MRPL23Q16540 153 aaKnown RBP6.53□□□□□ -1.36
PTCHD1-202ENST00000456522 DEFB104AQ8WTQ1 72 aa6.53□□□□□ -1.36
PTCHD1-202ENST00000456522 DNAJC30Q96LL9 226 aa6.53□□□□□ -1.36
PTCHD1-202ENST00000456522 ST20Q9HBF5 79 aa6.53□□□□□ -1.36
PTCHD1-202ENST00000456522 KLK5Q9Y337 293 aaPredicted RBP6.53□□□□□ -1.36
PTCHD1-202ENST00000456522 IGHV3-38A0A0C4DH36 116 aa6.52□□□□□ -1.37
PTCHD1-202ENST00000456522 LOC389332A0A1B0GUA5 103 aa6.52□□□□□ -1.37
PTCHD1-202ENST00000456522 H3BNG1 76 aa6.52□□□□□ -1.37
PTCHD1-202ENST00000456522 PPP1R17O96001 155 aa6.52□□□□□ -1.37
PTCHD1-202ENST00000456522 NEGR1Q7Z3B1 354 aa6.52□□□□□ -1.37
PTCHD1-202ENST00000456522 ALKBH7Q9BT30 221 aaPredicted RBP6.52□□□□□ -1.37
PTCHD1-202ENST00000456522 TRBV6-5A0A0K0K1A5 114 aa6.51□□□□□ -1.37
PTCHD1-202ENST00000456522 SDHAF1A6NFY7 115 aa6.51□□□□□ -1.37
PTCHD1-202ENST00000456522 UBE2D3P61077 147 aa6.51□□□□□ -1.37
PTCHD1-202ENST00000456522 UBE2D2P62837 147 aa6.51□□□□□ -1.37
PTCHD1-202ENST00000456522 C15orf53Q8NAA6 179 aa6.51□□□□□ -1.37
PTCHD1-202ENST00000456522 ATP6V0E2Q8NHE4 81 aa6.51□□□□□ -1.37
PTCHD1-202ENST00000456522 MAP1LC3AQ9H492 121 aa6.51□□□□□ -1.37
PTCHD1-202ENST00000456522 DNAH7Q8WXX0 4024 aa6.5□□□□□ -1.37
PTCHD1-202ENST00000456522 PHOX2AO14813 284 aa6.5□□□□□ -1.37
PTCHD1-202ENST00000456522 LINC00694P0DN24 101 aa6.5□□□□□ -1.37
PTCHD1-202ENST00000456522 PMCHP20382 165 aa6.5□□□□□ -1.37
PTCHD1-202ENST00000456522 IQCJQ1A5X6 159 aa6.5□□□□□ -1.37
PTCHD1-202ENST00000456522 C20orf78Q9BR46 151 aa6.5□□□□□ -1.37
PTCHD1-202ENST00000456522 TMEM70Q9BUB7 260 aa6.5□□□□□ -1.37
PTCHD1-202ENST00000456522 LAMTOR2Q9Y2Q5 125 aa6.5□□□□□ -1.37
PTCHD1-202ENST00000456522 I3L3M4 83 aa6.49□□□□□ -1.37
PTCHD1-202ENST00000456522 VCYO14598 125 aa6.49□□□□□ -1.37
PTCHD1-202ENST00000456522 POLR2KP53803 58 aaKnown RBP6.49□□□□□ -1.37
PTCHD1-202ENST00000456522 SH2D6Q7Z4S9 175 aa6.49□□□□□ -1.37
PTCHD1-202ENST00000456522 DAZ4Q86SG3 579 aaKnown RBP6.49□□□□□ -1.37
PTCHD1-202ENST00000456522 SMIM2Q9BVW6 85 aa6.49□□□□□ -1.37
PTCHD1-202ENST00000456522 DAZ3Q9NR90 486 aaKnown RBP6.49□□□□□ -1.37
PTCHD1-202ENST00000456522 APLNQ9ULZ1 77 aa6.49□□□□□ -1.37
PTCHD1-202ENST00000456522 C1orf196B1AJZ1 125 aa6.48□□□□□ -1.37
PTCHD1-202ENST00000456522 C3orf84H3BNL1 204 aa6.48□□□□□ -1.37
PTCHD1-202ENST00000456522 IFI27P40305 119 aaPredicted RBP6.48□□□□□ -1.37
PTCHD1-202ENST00000456522 COTL1Q14019 142 aa6.48□□□□□ -1.37
PTCHD1-202ENST00000456522 ESRGQ1W209 222 aa6.48□□□□□ -1.37
PTCHD1-202ENST00000456522 SERTAD4-AS1Q5TG53 156 aa6.48□□□□□ -1.37
PTCHD1-202ENST00000456522 LYPD5Q6UWN5 251 aa6.48□□□□□ -1.37
PTCHD1-202ENST00000456522 PRSS3P2Q8NHM4 247 aa6.48□□□□□ -1.37
PTCHD1-202ENST00000456522 C18orf32Q8TCD1 76 aa6.48□□□□□ -1.37
PTCHD1-202ENST00000456522 GTSF1LQ9H1H1 148 aa6.48□□□□□ -1.37
PTCHD1-202ENST00000456522 A0A0A0MQY5 61 aa6.47□□□□□ -1.37
PTCHD1-202ENST00000456522 TRBV27A0A0K0K1C4 114 aa6.47□□□□□ -1.37
PTCHD1-202ENST00000456522 TCAPO15273 167 aa6.47□□□□□ -1.37
PTCHD1-202ENST00000456522 TSHBP01222 138 aa6.47□□□□□ -1.37
PTCHD1-202ENST00000456522 FCER1GP30273 86 aa6.47□□□□□ -1.37
PTCHD1-202ENST00000456522 RPL32P62910 135 aaKnown RBP6.47□□□□□ -1.37
PTCHD1-202ENST00000456522 CASC10Q5T4H9 136 aa6.47□□□□□ -1.37
PTCHD1-202ENST00000456522 FA2HQ7L5A8 372 aa6.47□□□□□ -1.37
PTCHD1-202ENST00000456522 BAGE3Q86Y29 109 aa6.47□□□□□ -1.37
PTCHD1-202ENST00000456522 Q8N8P6 123 aa6.47□□□□□ -1.37
PTCHD1-202ENST00000456522 KIR2DL4Q99706 377 aa6.47□□□□□ -1.37
PTCHD1-202ENST00000456522 IGLV2-18A0A075B6J9 118 aa6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 HIST1H2BKO60814 126 aa6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 HIST1H2BJP06899 126 aa6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 HIST1H2BOP23527 126 aa6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 HIST1H2BBP33778 126 aa6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 AMTP48728 403 aa6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 CCL18P55774 89 aa6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 TCTAP57738 103 aa6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 HIST1H2BDP58876 126 aa6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 HIST1H2BCP62807 126 aa6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 HIST2H2BEQ16778 126 aa6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 RNASEKQ6P5S7 137 aaKnown RBP6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 NTM-AS1Q6ZSK4 140 aa6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 NIT1Q86X76 327 aa6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 UBE2DNLQ8IWF7 75 aa6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 HIST1H2BHQ93079 126 aa6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 HIST1H2BNQ99877 126 aa6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 HIST1H2BMQ99879 126 aa6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 NXT2Q9NPJ8 142 aaKnown RBP6.46□□□□□ -1.38
PTCHD1-202ENST00000456522 DYNC2H1Q8NCM8 4307 aaKnown RBP6.45□□□□□ -1.38
PTCHD1-202ENST00000456522 TRBV6-8A0A0A6YYG3 113 aa6.45□□□□□ -1.38
PTCHD1-202ENST00000456522 IGHV1-24A0A0C4DH33 117 aa6.45□□□□□ -1.38
PTCHD1-202ENST00000456522 RAB5BP61020 215 aa6.45□□□□□ -1.38
PTCHD1-202ENST00000456522 TMEM97Q5BJF2 176 aa6.45□□□□□ -1.38
PTCHD1-202ENST00000456522 CHCHD5Q9BSY4 110 aa6.45□□□□□ -1.38
PTCHD1-202ENST00000456522 LINC00588Q9Y4M8 146 aa6.45□□□□□ -1.38
PTCHD1-202ENST00000456522 TRBV25-1A0A075B6N4 114 aa6.44□□□□□ -1.38
PTCHD1-202ENST00000456522 TRAV8-6A0A0B4J262 113 aa6.44□□□□□ -1.38
PTCHD1-202ENST00000456522 LINC00614P0C842 121 aa6.44□□□□□ -1.38
PTCHD1-202ENST00000456522 Q0VG73 95 aa6.44□□□□□ -1.38
PTCHD1-202ENST00000456522 GAGE6Q13070 117 aa6.44□□□□□ -1.38
PTCHD1-202ENST00000456522 LAGE3Q14657 143 aa6.44□□□□□ -1.38
PTCHD1-202ENST00000456522 LELP1Q5T871 98 aa6.44□□□□□ -1.38
PTCHD1-202ENST00000456522 URB1-AS1Q96HZ7 61 aa6.44□□□□□ -1.38
PTCHD1-202ENST00000456522 TMEM243Q9BU79 118 aa6.44□□□□□ -1.38
PTCHD1-202ENST00000456522 TENM2Q9NT68 2774 aa6.44□□□□□ -1.38
PTCHD1-202ENST00000456522 CSMD3Q7Z407 3707 aa6.43□□□□□ -1.38
PTCHD1-202ENST00000456522 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.43□□□□□ -1.38
PTCHD1-202ENST00000456522 IGKV2-29A2NJV5 120 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms