RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 GAGE12FP0CL80 117 aa5.28□□□□□ -1.56
ERCC3-204ENST00000456257 GAGE12GP0CL81 117 aa5.28□□□□□ -1.56
ERCC3-204ENST00000456257 GAGE12IP0CL82 117 aa5.28□□□□□ -1.56
ERCC3-204ENST00000456257 CHCHD7Q9BUK0 85 aa5.28□□□□□ -1.56
ERCC3-204ENST00000456257 VAMP8Q9BV40 100 aa5.28□□□□□ -1.56
ERCC3-204ENST00000456257 KRTAP4-6Q9BYQ5 205 aa5.28□□□□□ -1.56
ERCC3-204ENST00000456257 TRGV2A0A075B6R0 118 aa5.27□□□□□ -1.57
ERCC3-204ENST00000456257 TEX48A0A1B0GUV7 120 aa5.27□□□□□ -1.57
ERCC3-204ENST00000456257 PRSS29PA6NIE9 313 aa5.27□□□□□ -1.57
ERCC3-204ENST00000456257 H7C423 109 aa5.27□□□□□ -1.57
ERCC3-204ENST00000456257 IGLC3P0DOY3 106 aa5.27□□□□□ -1.57
ERCC3-204ENST00000456257 SMCPP49901 116 aaPredicted RBP5.27□□□□□ -1.57
ERCC3-204ENST00000456257 MRPS36P82909 103 aaKnown RBP5.27□□□□□ -1.57
ERCC3-204ENST00000456257 RPL36AP83881 106 aaKnown RBP5.27□□□□□ -1.57
ERCC3-204ENST00000456257 DEFB135Q30KP9 77 aa5.27□□□□□ -1.57
ERCC3-204ENST00000456257 FAM222AQ5U5X8 452 aa5.27□□□□□ -1.57
ERCC3-204ENST00000456257 NTM-AS1Q6ZSK4 140 aa5.27□□□□□ -1.57
ERCC3-204ENST00000456257 NEGR1Q7Z3B1 354 aa5.27□□□□□ -1.57
ERCC3-204ENST00000456257 MRPL52Q86TS9 123 aaKnown RBP5.27□□□□□ -1.57
ERCC3-204ENST00000456257 SBSPONQ8IVN8 264 aa5.27□□□□□ -1.57
ERCC3-204ENST00000456257 ZNRF2Q8NHG8 242 aa5.27□□□□□ -1.57
ERCC3-204ENST00000456257 RPL36ALQ969Q0 106 aaKnown RBP5.27□□□□□ -1.57
ERCC3-204ENST00000456257 AMELXQ99217 191 aa5.27□□□□□ -1.57
ERCC3-204ENST00000456257 MIEN1Q9BRT3 115 aa5.27□□□□□ -1.57
ERCC3-204ENST00000456257 CST9LQ9H4G1 147 aa5.27□□□□□ -1.57
ERCC3-204ENST00000456257 PRO0255Q9UI72 69 aa5.27□□□□□ -1.57
ERCC3-204ENST00000456257 NBEAL1Q6ZS30 2694 aa5.27□□□□□ -1.57
ERCC3-204ENST00000456257 TSTD3H0UI37 97 aa5.26□□□□□ -1.57
ERCC3-204ENST00000456257 PRSS1P07477 247 aa5.26□□□□□ -1.57
ERCC3-204ENST00000456257 SPART-AS1P0CW21 52 aa5.26□□□□□ -1.57
ERCC3-204ENST00000456257 RPL39P62891 51 aaKnown RBP5.26□□□□□ -1.57
ERCC3-204ENST00000456257 COTL1Q14019 142 aa5.26□□□□□ -1.57
ERCC3-204ENST00000456257 BAALCQ8WXS3 180 aa5.26□□□□□ -1.57
ERCC3-204ENST00000456257 PRADC1Q9BSG0 188 aa5.26□□□□□ -1.57
ERCC3-204ENST00000456257 C11orf68Q9H3H3 251 aaKnown RBP5.26□□□□□ -1.57
ERCC3-204ENST00000456257 SPANXA1Q9NS26 97 aa5.26□□□□□ -1.57
ERCC3-204ENST00000456257 MGAM2Q2M2H8 2515 aa5.26□□□□□ -1.57
ERCC3-204ENST00000456257 TRGV4A0A0C4DH28 118 aa5.25□□□□□ -1.57
ERCC3-204ENST00000456257 F8VRH5 84 aa5.25□□□□□ -1.57
ERCC3-204ENST00000456257 H3BNG1 76 aa5.25□□□□□ -1.57
ERCC3-204ENST00000456257 J3QL48 77 aa5.25□□□□□ -1.57
ERCC3-204ENST00000456257 DLEU1O43261 78 aa5.25□□□□□ -1.57
ERCC3-204ENST00000456257 DPM2O94777 84 aa5.25□□□□□ -1.57
ERCC3-204ENST00000456257 PLNP26678 52 aa5.25□□□□□ -1.57
ERCC3-204ENST00000456257 DDTP30046 118 aa5.25□□□□□ -1.57
ERCC3-204ENST00000456257 PMVKQ15126 192 aa5.25□□□□□ -1.57
ERCC3-204ENST00000456257 TMEM97Q5BJF2 176 aa5.25□□□□□ -1.57
ERCC3-204ENST00000456257 PAPPA-AS1Q5QFB9 102 aa5.25□□□□□ -1.57
ERCC3-204ENST00000456257 NFE4Q86UQ8 179 aa5.25□□□□□ -1.57
ERCC3-204ENST00000456257 TM2D3Q9BRN9 247 aa5.25□□□□□ -1.57
ERCC3-204ENST00000456257 NOTCH1P46531 2555 aa5.25□□□□□ -1.57
ERCC3-204ENST00000456257 IGLV4-3A0A075B6K6 122 aa5.24□□□□□ -1.57
ERCC3-204ENST00000456257 TRAV26-1A0A087WT03 109 aa5.24□□□□□ -1.57
ERCC3-204ENST00000456257 LINC00587B1AMM8 73 aa5.24□□□□□ -1.57
ERCC3-204ENST00000456257 K7EIL1 84 aa5.24□□□□□ -1.57
ERCC3-204ENST00000456257 DEFB130BP0DP73 79 aa5.24□□□□□ -1.57
ERCC3-204ENST00000456257 DEFB130AP0DP74 79 aa5.24□□□□□ -1.57
ERCC3-204ENST00000456257 TIRAPP58753 221 aa5.24□□□□□ -1.57
ERCC3-204ENST00000456257 MAJINQ3KP22 176 aa5.24□□□□□ -1.57
ERCC3-204ENST00000456257 SPATA45Q537H7 98 aa5.24□□□□□ -1.57
ERCC3-204ENST00000456257 Q6ZN92 141 aa5.24□□□□□ -1.57
ERCC3-204ENST00000456257 FAM19A3Q7Z5A8 133 aa5.24□□□□□ -1.57
ERCC3-204ENST00000456257 VSIG2Q96IQ7 327 aa5.24□□□□□ -1.57
ERCC3-204ENST00000456257 PRO1933Q9H354 126 aa5.24□□□□□ -1.57
ERCC3-204ENST00000456257 MRPL35Q9NZE8 188 aaKnown RBP5.24□□□□□ -1.57
ERCC3-204ENST00000456257 UBE2D4Q9Y2X8 147 aa5.24□□□□□ -1.57
ERCC3-204ENST00000456257 PAM16Q9Y3D7 125 aa5.24□□□□□ -1.57
ERCC3-204ENST00000456257 FBN3Q75N90 2809 aa5.24□□□□□ -1.57
ERCC3-204ENST00000456257 IGLV4-69A0A075B6H9 119 aa5.23□□□□□ -1.57
ERCC3-204ENST00000456257 IGKCP01834 107 aa5.23□□□□□ -1.57
ERCC3-204ENST00000456257 ATP5G1P05496 136 aa5.23□□□□□ -1.57
ERCC3-204ENST00000456257 COX8AP10176 69 aa5.23□□□□□ -1.57
ERCC3-204ENST00000456257 LORP23490 312 aaPredicted RBP5.23□□□□□ -1.57
ERCC3-204ENST00000456257 EMP1P54849 157 aa5.23□□□□□ -1.57
ERCC3-204ENST00000456257 DAD1P61803 113 aa5.23□□□□□ -1.57
ERCC3-204ENST00000456257 C12orf74Q32Q52 190 aa5.23□□□□□ -1.57
ERCC3-204ENST00000456257 SH2D6Q7Z4S9 175 aa5.23□□□□□ -1.57
ERCC3-204ENST00000456257 ATOH7Q8N100 152 aa5.23□□□□□ -1.57
ERCC3-204ENST00000456257 UQCR10Q9UDW1 63 aa5.23□□□□□ -1.57
ERCC3-204ENST00000456257 CELA1Q9UNI1 258 aa5.23□□□□□ -1.57
ERCC3-204ENST00000456257 MRPS16Q9Y3D3 137 aaKnown RBP5.23□□□□□ -1.57
ERCC3-204ENST00000456257 CHTOPQ9Y3Y2 248 aaKnown RBP5.23□□□□□ -1.57
ERCC3-204ENST00000456257 TRBV6-8A0A0A6YYG3 113 aa5.22□□□□□ -1.57
ERCC3-204ENST00000456257 LOC100131303A0A0U1RQF7 123 aa5.22□□□□□ -1.57
ERCC3-204ENST00000456257 A0A1B0GUV1 79 aa5.22□□□□□ -1.57
ERCC3-204ENST00000456257 hDV102S1A0JD36 115 aa5.22□□□□□ -1.57
ERCC3-204ENST00000456257 GAGE12JA6NER3 117 aa5.22□□□□□ -1.57
ERCC3-204ENST00000456257 HSBP1L1C9JCN9 74 aa5.22□□□□□ -1.57
ERCC3-204ENST00000456257 SIVA1O15304 175 aa5.22□□□□□ -1.57
ERCC3-204ENST00000456257 FGF6P10767 208 aa5.22□□□□□ -1.57
ERCC3-204ENST00000456257 SMAGPQ0VAQ4 97 aa5.22□□□□□ -1.57
ERCC3-204ENST00000456257 GAGE1Q13065 139 aa5.22□□□□□ -1.57
ERCC3-204ENST00000456257 GAGE4Q13068 117 aa5.22□□□□□ -1.57
ERCC3-204ENST00000456257 GAGE5Q13069 117 aa5.22□□□□□ -1.57
ERCC3-204ENST00000456257 GAGE13Q4V321 117 aa5.22□□□□□ -1.57
ERCC3-204ENST00000456257 BOD1L2Q8IYS8 172 aa5.22□□□□□ -1.57
ERCC3-204ENST00000456257 ATP6V0E2Q8NHE4 81 aa5.22□□□□□ -1.57
ERCC3-204ENST00000456257 PMCHL2Q9BQD1 86 aa5.22□□□□□ -1.57
ERCC3-204ENST00000456257 C11orf86A6NJI1 115 aa5.21□□□□□ -1.58
ERCC3-204ENST00000456257 A6NJY4 79 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms