RNA–Protein interactions for RNA: ENST00000453560.6

RAP1B-208, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 530 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-208ENST00000453560 C14orf177Q52M58 125 aa12.65□□□□□ -0.38
RAP1B-208ENST00000453560 LINC01551Q86U37 167 aa12.65□□□□□ -0.38
RAP1B-208ENST00000453560 C20orf203Q8NBC4 194 aa12.65□□□□□ -0.38
RAP1B-208ENST00000453560 A0A1B0GUV1 79 aa12.64□□□□□ -0.39
RAP1B-208ENST00000453560 INAFM2P0DMQ5 153 aa12.64□□□□□ -0.39
RAP1B-208ENST00000453560 DEFB104AQ8WTQ1 72 aa12.64□□□□□ -0.39
RAP1B-208ENST00000453560 HERC1Q15751 4861 aa12.64□□□□□ -0.39
RAP1B-208ENST00000453560 USP17L23D6RBM5 183 aa12.63□□□□□ -0.39
RAP1B-208ENST00000453560 SRP19P09132 144 aaKnown RBP12.63□□□□□ -0.39
RAP1B-208ENST00000453560 REG3AQ06141 175 aa12.63□□□□□ -0.39
RAP1B-208ENST00000453560 COTL1Q14019 142 aa12.63□□□□□ -0.39
RAP1B-208ENST00000453560 SMIM15Q7Z3B0 74 aa12.63□□□□□ -0.39
RAP1B-208ENST00000453560 IGLV4-60A0A075B6I1 120 aa12.62□□□□□ -0.39
RAP1B-208ENST00000453560 ZNF727A8MUV8 499 aa12.62□□□□□ -0.39
RAP1B-208ENST00000453560 RPL39LQ96EH5 51 aaKnown RBP12.62□□□□□ -0.39
RAP1B-208ENST00000453560 AMTP48728 403 aa12.61□□□□□ -0.39
RAP1B-208ENST00000453560 TEX261Q6UWH6 196 aa12.61□□□□□ -0.39
RAP1B-208ENST00000453560 TSKUQ8WUA8 353 aa12.6□□□□□ -0.39
RAP1B-208ENST00000453560 GFRA4Q9GZZ7 299 aa12.6□□□□□ -0.39
RAP1B-208ENST00000453560 OSTCQ9NRP0 149 aa12.6□□□□□ -0.39
RAP1B-208ENST00000453560 TRAV8-4A0A0B4J246 113 aa12.59□□□□□ -0.39
RAP1B-208ENST00000453560 FAM231BA6NCW3 169 aa12.59□□□□□ -0.39
RAP1B-208ENST00000453560 HIGD1CA8MV81 97 aa12.59□□□□□ -0.39
RAP1B-208ENST00000453560 UBE2L6O14933 153 aa12.59□□□□□ -0.39
RAP1B-208ENST00000453560 PRSS1P07477 247 aa12.59□□□□□ -0.39
RAP1B-208ENST00000453560 SCXQ7RTU7 201 aa12.59□□□□□ -0.39
RAP1B-208ENST00000453560 IGLV10-54A0A075B6I4 117 aa12.58□□□□□ -0.4
RAP1B-208ENST00000453560 BORCS7Q96B45 105 aa12.58□□□□□ -0.4
RAP1B-208ENST00000453560 A0A1B0GUT8 65 aa12.57□□□□□ -0.4
RAP1B-208ENST00000453560 NCR2O95944 276 aa12.57□□□□□ -0.4
RAP1B-208ENST00000453560 CHAC1Q9BUX1 264 aa12.57□□□□□ -0.4
RAP1B-208ENST00000453560 FLG2Q5D862 2391 aaPredicted RBP12.56□□□□□ -0.4
RAP1B-208ENST00000453560 DMBT1Q9UGM3 2413 aaPredicted RBP12.56□□□□□ -0.4
RAP1B-208ENST00000453560 TRBV6-5A0A0K0K1A5 114 aa12.56□□□□□ -0.4
RAP1B-208ENST00000453560 SDHAF1A6NFY7 115 aa12.56□□□□□ -0.4
RAP1B-208ENST00000453560 DGAT2L7PQ6IED9 249 aa12.56□□□□□ -0.4
RAP1B-208ENST00000453560 LINC00528Q8N1L1 170 aa12.56□□□□□ -0.4
RAP1B-208ENST00000453560 TMEM191AQ9H0A3 160 aa12.56□□□□□ -0.4
RAP1B-208ENST00000453560 V9GYV3 84 aa12.56□□□□□ -0.4
RAP1B-208ENST00000453560 FAM74A3Q4VXF1 159 aa12.55□□□□□ -0.4
RAP1B-208ENST00000453560 ISOC2Q96AB3 205 aa12.55□□□□□ -0.4
RAP1B-208ENST00000453560 C9JQL5 133 aa12.54□□□□□ -0.4
RAP1B-208ENST00000453560 GAS8-AS1O95177 125 aa12.54□□□□□ -0.4
RAP1B-208ENST00000453560 APCSP02743 223 aa12.54□□□□□ -0.4
RAP1B-208ENST00000453560 TMEM241Q24JQ0 296 aa12.54□□□□□ -0.4
RAP1B-208ENST00000453560 CLRN3Q8NCR9 226 aa12.54□□□□□ -0.4
RAP1B-208ENST00000453560 CIRBP-AS1Q8TBR5 109 aa12.54□□□□□ -0.4
RAP1B-208ENST00000453560 H7C423 109 aa12.53□□□□□ -0.4
RAP1B-208ENST00000453560 RPL23P62829 140 aaKnown RBP12.53□□□□□ -0.4
RAP1B-208ENST00000453560 C9orf163Q8N9P6 203 aa12.53□□□□□ -0.4
RAP1B-208ENST00000453560 RNF185Q96GF1 192 aa12.53□□□□□ -0.4
RAP1B-208ENST00000453560 I3L3M4 83 aa12.52□□□□□ -0.41
RAP1B-208ENST00000453560 PLA2G1BP04054 148 aaKnown RBP12.52□□□□□ -0.41
RAP1B-208ENST00000453560 SRSF3P84103 164 aaKnown RBP12.52□□□□□ -0.41
RAP1B-208ENST00000453560 NUP35Q8NFH5 326 aa12.52□□□□□ -0.41
RAP1B-208ENST00000453560 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.51□□□□□ -0.41
RAP1B-208ENST00000453560 IGKV2-29A2NJV5 120 aaPredicted RBP12.51□□□□□ -0.41
RAP1B-208ENST00000453560 RAB4AP20338 218 aa12.51□□□□□ -0.41
RAP1B-208ENST00000453560 FGF6P10767 208 aa12.5□□□□□ -0.41
RAP1B-208ENST00000453560 PMCHP20382 165 aa12.5□□□□□ -0.41
RAP1B-208ENST00000453560 RPS10P46783 165 aaKnown RBP12.5□□□□□ -0.41
RAP1B-208ENST00000453560 CNBPP62633 177 aaKnown RBP12.5□□□□□ -0.41
RAP1B-208ENST00000453560 AMMECR1LQ6DCA0 310 aa12.5□□□□□ -0.41
RAP1B-208ENST00000453560 AMN1Q8IY45 258 aa12.5□□□□□ -0.41
RAP1B-208ENST00000453560 MRAP2Q96G30 205 aa12.5□□□□□ -0.41
RAP1B-208ENST00000453560 ST20Q9HBF5 79 aa12.5□□□□□ -0.41
RAP1B-208ENST00000453560 NAT8Q9UHE5 227 aa12.5□□□□□ -0.41
RAP1B-208ENST00000453560 TSHBP01222 138 aa12.49□□□□□ -0.41
RAP1B-208ENST00000453560 POLR2KP53803 58 aaKnown RBP12.49□□□□□ -0.41
RAP1B-208ENST00000453560 PEA15Q15121 130 aa12.49□□□□□ -0.41
RAP1B-208ENST00000453560 ADIRFQ15847 76 aa12.49□□□□□ -0.41
RAP1B-208ENST00000453560 SMDT1Q9H4I9 107 aa12.49□□□□□ -0.41
RAP1B-208ENST00000453560 NAT8BQ9UHF3 227 aa12.49□□□□□ -0.41
RAP1B-208ENST00000453560 TRBV27A0A0K0K1C4 114 aa12.48□□□□□ -0.41
RAP1B-208ENST00000453560 hDV102S1A0JD36 115 aa12.48□□□□□ -0.41
RAP1B-208ENST00000453560 ESDP10768 282 aa12.48□□□□□ -0.41
RAP1B-208ENST00000453560 ZNF25P17030 456 aaPredicted RBP12.48□□□□□ -0.41
RAP1B-208ENST00000453560 RIGQ13278 110 aa12.48□□□□□ -0.41
RAP1B-208ENST00000453560 RNASEKQ6P5S7 137 aaKnown RBP12.48□□□□□ -0.41
RAP1B-208ENST00000453560 IGKV3OR2-268A0A0C4DH90 116 aa12.47□□□□□ -0.41
RAP1B-208ENST00000453560 KRTAP10-4P60372 401 aaPredicted RBP12.47□□□□□ -0.41
RAP1B-208ENST00000453560 TMEM242Q9NWH2 141 aa12.47□□□□□ -0.41
RAP1B-208ENST00000453560 SMIM27A0A1W2PRY6 76 aa12.46□□□□□ -0.41
RAP1B-208ENST00000453560 GAGE12HA6NDE8 117 aa12.46□□□□□ -0.41
RAP1B-208ENST00000453560 SDIM1Q6ZPB5 146 aa12.46□□□□□ -0.41
RAP1B-208ENST00000453560 C15orf56Q8N910 161 aa12.46□□□□□ -0.41
RAP1B-208ENST00000453560 SLPIP03973 132 aa12.45□□□□□ -0.42
RAP1B-208ENST00000453560 CHCHD10Q8WYQ3 142 aaPredicted RBP12.45□□□□□ -0.42
RAP1B-208ENST00000453560 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.45□□□□□ -0.42
RAP1B-208ENST00000453560 SMKR1H3BMG3 65 aa12.44□□□□□ -0.42
RAP1B-208ENST00000453560 PANO1I0J062 215 aa12.44□□□□□ -0.42
RAP1B-208ENST00000453560 NRACQ8N912 160 aa12.44□□□□□ -0.42
RAP1B-208ENST00000453560 OR5A1Q8NGJ0 315 aa12.44□□□□□ -0.42
RAP1B-208ENST00000453560 MRPL52Q86TS9 123 aaKnown RBP12.43□□□□□ -0.42
RAP1B-208ENST00000453560 BTF3L4Q96K17 158 aa12.43□□□□□ -0.42
RAP1B-208ENST00000453560 AP5S1Q9NUS5 200 aa12.43□□□□□ -0.42
RAP1B-208ENST00000453560 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.42□□□□□ -0.42
RAP1B-208ENST00000453560 PPP1R17O96001 155 aa12.42□□□□□ -0.42
RAP1B-208ENST00000453560 FAM104BQ5XKR9 115 aa12.42□□□□□ -0.42
RAP1B-208ENST00000453560 TMEM101Q96IK0 257 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 261.6 ms