RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 Q8N976 141 aa6.26□□□□□ -1.41
CDC42EP3-203ENST00000453555 NTN5Q8WTR8 489 aaPredicted RBP6.26□□□□□ -1.41
CDC42EP3-203ENST00000453555 RMI2Q96E14 147 aa6.26□□□□□ -1.41
CDC42EP3-203ENST00000453555 PGLYRP4Q96LB8 373 aa6.26□□□□□ -1.41
CDC42EP3-203ENST00000453555 KRTAP9-3Q9BYQ3 159 aa6.26□□□□□ -1.41
CDC42EP3-203ENST00000453555 AP5S1Q9NUS5 200 aa6.26□□□□□ -1.41
CDC42EP3-203ENST00000453555 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.25□□□□□ -1.41
CDC42EP3-203ENST00000453555 TRAV26-2A0A0B4J265 109 aa6.25□□□□□ -1.41
CDC42EP3-203ENST00000453555 IGHV1-24A0A0C4DH33 117 aa6.25□□□□□ -1.41
CDC42EP3-203ENST00000453555 A8MWL6 223 aa6.25□□□□□ -1.41
CDC42EP3-203ENST00000453555 CRPP02741 224 aa6.25□□□□□ -1.41
CDC42EP3-203ENST00000453555 FOXA3P55318 350 aaPredicted RBP6.25□□□□□ -1.41
CDC42EP3-203ENST00000453555 XGP55808 180 aa6.25□□□□□ -1.41
CDC42EP3-203ENST00000453555 HAMPP81172 84 aa6.25□□□□□ -1.41
CDC42EP3-203ENST00000453555 ENHOQ6UWT2 76 aa6.25□□□□□ -1.41
CDC42EP3-203ENST00000453555 LINC01551Q86U37 167 aa6.25□□□□□ -1.41
CDC42EP3-203ENST00000453555 Q8N1X5 172 aa6.25□□□□□ -1.41
CDC42EP3-203ENST00000453555 NIT2Q9NQR4 276 aa6.25□□□□□ -1.41
CDC42EP3-203ENST00000453555 COX11Q9Y6N1 276 aa6.25□□□□□ -1.41
CDC42EP3-203ENST00000453555 RBX1P62877 108 aa6.24□□□□□ -1.41
CDC42EP3-203ENST00000453555 Q0VG73 95 aa6.24□□□□□ -1.41
CDC42EP3-203ENST00000453555 CLPSL2Q6UWE3 100 aa6.24□□□□□ -1.41
CDC42EP3-203ENST00000453555 TEX261Q6UWH6 196 aa6.24□□□□□ -1.41
CDC42EP3-203ENST00000453555 SMIM15Q7Z3B0 74 aa6.24□□□□□ -1.41
CDC42EP3-203ENST00000453555 GATD1Q8NB37 220 aa6.24□□□□□ -1.41
CDC42EP3-203ENST00000453555 CNFNQ9BYD5 112 aa6.24□□□□□ -1.41
CDC42EP3-203ENST00000453555 NDUFS6O75380 124 aaKnown RBP6.23□□□□□ -1.41
CDC42EP3-203ENST00000453555 PKIAP61925 76 aa6.23□□□□□ -1.41
CDC42EP3-203ENST00000453555 IQCJQ1A5X6 159 aa6.23□□□□□ -1.41
CDC42EP3-203ENST00000453555 BORCS7Q96B45 105 aa6.23□□□□□ -1.41
CDC42EP3-203ENST00000453555 RPL39LQ96EH5 51 aaKnown RBP6.23□□□□□ -1.41
CDC42EP3-203ENST00000453555 C1orf43Q9BWL3 253 aa6.23□□□□□ -1.41
CDC42EP3-203ENST00000453555 HIGD1CA8MV81 97 aa6.22□□□□□ -1.41
CDC42EP3-203ENST00000453555 C9JQL5 133 aa6.22□□□□□ -1.41
CDC42EP3-203ENST00000453555 SMR3BP02814 79 aaPredicted RBP6.22□□□□□ -1.41
CDC42EP3-203ENST00000453555 TMEM241Q24JQ0 296 aa6.22□□□□□ -1.41
CDC42EP3-203ENST00000453555 LINC01620Q4KN68 170 aa6.22□□□□□ -1.41
CDC42EP3-203ENST00000453555 CT83Q5H943 113 aa6.22□□□□□ -1.41
CDC42EP3-203ENST00000453555 LINC00269Q8N2A0 174 aa6.22□□□□□ -1.41
CDC42EP3-203ENST00000453555 TSKUQ8WUA8 353 aa6.22□□□□□ -1.41
CDC42EP3-203ENST00000453555 TMEM243Q9BU79 118 aa6.22□□□□□ -1.41
CDC42EP3-203ENST00000453555 OSTCQ9NRP0 149 aa6.22□□□□□ -1.41
CDC42EP3-203ENST00000453555 UBE2L6O14933 153 aa6.21□□□□□ -1.42
CDC42EP3-203ENST00000453555 HLA-DQA1P01909 254 aa6.21□□□□□ -1.42
CDC42EP3-203ENST00000453555 AMTP48728 403 aa6.21□□□□□ -1.42
CDC42EP3-203ENST00000453555 RPL23P62829 140 aaKnown RBP6.21□□□□□ -1.42
CDC42EP3-203ENST00000453555 COTL1Q14019 142 aa6.21□□□□□ -1.42
CDC42EP3-203ENST00000453555 PEA15Q15121 130 aa6.21□□□□□ -1.42
CDC42EP3-203ENST00000453555 ADIRFQ15847 76 aa6.21□□□□□ -1.42
CDC42EP3-203ENST00000453555 MIAQ16674 131 aa6.21□□□□□ -1.42
CDC42EP3-203ENST00000453555 ISOC2Q96AB3 205 aa6.21□□□□□ -1.42
CDC42EP3-203ENST00000453555 FAM30AQ9NZY2 134 aa6.21□□□□□ -1.42
CDC42EP3-203ENST00000453555 V9GYV3 84 aa6.21□□□□□ -1.42
CDC42EP3-203ENST00000453555 IGLV4-60A0A075B6I1 120 aa6.2□□□□□ -1.42
CDC42EP3-203ENST00000453555 IGLV10-54A0A075B6I4 117 aa6.2□□□□□ -1.42
CDC42EP3-203ENST00000453555 A0A1B0GUT8 65 aa6.2□□□□□ -1.42
CDC42EP3-203ENST00000453555 EPM2AB3EWF7 344 aa6.2□□□□□ -1.42
CDC42EP3-203ENST00000453555 GAS8-AS1O95177 125 aa6.2□□□□□ -1.42
CDC42EP3-203ENST00000453555 REG3AQ06141 175 aa6.2□□□□□ -1.42
CDC42EP3-203ENST00000453555 FAM74A3Q4VXF1 159 aa6.2□□□□□ -1.42
CDC42EP3-203ENST00000453555 C20orf203Q8NBC4 194 aa6.2□□□□□ -1.42
CDC42EP3-203ENST00000453555 FRZBQ92765 325 aa6.2□□□□□ -1.42
CDC42EP3-203ENST00000453555 TMEM70Q9BUB7 260 aa6.2□□□□□ -1.42
CDC42EP3-203ENST00000453555 GFRA4Q9GZZ7 299 aa6.2□□□□□ -1.42
CDC42EP3-203ENST00000453555 PRR34Q9NV39 138 aa6.2□□□□□ -1.42
CDC42EP3-203ENST00000453555 DNAH8Q96JB1 4490 aa6.2□□□□□ -1.42
CDC42EP3-203ENST00000453555 FAM231BA6NCW3 169 aa6.19□□□□□ -1.42
CDC42EP3-203ENST00000453555 SDHAF1A6NFY7 115 aa6.19□□□□□ -1.42
CDC42EP3-203ENST00000453555 NUP35Q8NFH5 326 aa6.19□□□□□ -1.42
CDC42EP3-203ENST00000453555 TMEM191AQ9H0A3 160 aa6.19□□□□□ -1.42
CDC42EP3-203ENST00000453555 NAT8Q9UHE5 227 aa6.19□□□□□ -1.42
CDC42EP3-203ENST00000453555 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.18□□□□□ -1.42
CDC42EP3-203ENST00000453555 A0A1B0GUV1 79 aa6.18□□□□□ -1.42
CDC42EP3-203ENST00000453555 IGKV2-29A2NJV5 120 aaPredicted RBP6.18□□□□□ -1.42
CDC42EP3-203ENST00000453555 USP17L23D6RBM5 183 aa6.18□□□□□ -1.42
CDC42EP3-203ENST00000453555 APCSP02743 223 aa6.18□□□□□ -1.42
CDC42EP3-203ENST00000453555 PMCHP20382 165 aa6.18□□□□□ -1.42
CDC42EP3-203ENST00000453555 Q5VSD8 79 aa6.18□□□□□ -1.42
CDC42EP3-203ENST00000453555 KRTAP26-1Q6PEX3 210 aa6.18□□□□□ -1.42
CDC42EP3-203ENST00000453555 AMN1Q8IY45 258 aa6.18□□□□□ -1.42
CDC42EP3-203ENST00000453555 RNF185Q96GF1 192 aa6.18□□□□□ -1.42
CDC42EP3-203ENST00000453555 IGKV3OR2-268A0A0C4DH90 116 aa6.17□□□□□ -1.42
CDC42EP3-203ENST00000453555 SMKR1H3BMG3 65 aa6.17□□□□□ -1.42
CDC42EP3-203ENST00000453555 I3L3M4 83 aa6.17□□□□□ -1.42
CDC42EP3-203ENST00000453555 RAB4AP20338 218 aa6.17□□□□□ -1.42
CDC42EP3-203ENST00000453555 RIGQ13278 110 aa6.17□□□□□ -1.42
CDC42EP3-203ENST00000453555 C14orf177Q52M58 125 aa6.17□□□□□ -1.42
CDC42EP3-203ENST00000453555 ANKRD39Q53RE8 183 aa6.17□□□□□ -1.42
CDC42EP3-203ENST00000453555 AMMECR1LQ6DCA0 310 aa6.17□□□□□ -1.42
CDC42EP3-203ENST00000453555 ST20Q9HBF5 79 aa6.17□□□□□ -1.42
CDC42EP3-203ENST00000453555 NAT8BQ9UHF3 227 aa6.17□□□□□ -1.42
CDC42EP3-203ENST00000453555 PLA2G2DQ9UNK4 145 aa6.17□□□□□ -1.42
CDC42EP3-203ENST00000453555 TRBV6-5A0A0K0K1A5 114 aa6.16□□□□□ -1.42
CDC42EP3-203ENST00000453555 SMIM27A0A1W2PRY6 76 aa6.16□□□□□ -1.42
CDC42EP3-203ENST00000453555 NCR2O95944 276 aa6.16□□□□□ -1.42
CDC42EP3-203ENST00000453555 PRSS1P07477 247 aa6.16□□□□□ -1.42
CDC42EP3-203ENST00000453555 RPS10P46783 165 aaKnown RBP6.16□□□□□ -1.42
CDC42EP3-203ENST00000453555 RNASEKQ6P5S7 137 aaKnown RBP6.16□□□□□ -1.42
CDC42EP3-203ENST00000453555 SMDT1Q9H4I9 107 aa6.16□□□□□ -1.42
CDC42EP3-203ENST00000453555 TRAV8-4A0A0B4J246 113 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms