RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 RPL36ALQ969Q0 106 aaKnown RBP4.2□□□□□ -1.74
SDC4P-201ENST00000453285 TOMM6Q96B49 74 aa4.2□□□□□ -1.74
SDC4P-201ENST00000453285 KIR2DL4Q99706 377 aa4.2□□□□□ -1.74
SDC4P-201ENST00000453285 PRADC1Q9BSG0 188 aa4.2□□□□□ -1.74
SDC4P-201ENST00000453285 CHCHD7Q9BUK0 85 aa4.2□□□□□ -1.74
SDC4P-201ENST00000453285 PRO0255Q9UI72 69 aa4.2□□□□□ -1.74
SDC4P-201ENST00000453285 IGIPA6NJ69 53 aa4.19□□□□□ -1.74
SDC4P-201ENST00000453285 SYS1-DBNDD2H3BUS1 97 aa4.19□□□□□ -1.74
SDC4P-201ENST00000453285 BTF3P20290 206 aaKnown RBP4.19□□□□□ -1.74
SDC4P-201ENST00000453285 KRTDAPP60985 99 aa4.19□□□□□ -1.74
SDC4P-201ENST00000453285 RPL39P62891 51 aaKnown RBP4.19□□□□□ -1.74
SDC4P-201ENST00000453285 C2orf66Q6UXQ4 117 aa4.19□□□□□ -1.74
SDC4P-201ENST00000453285 DAZ4Q86SG3 579 aaKnown RBP4.19□□□□□ -1.74
SDC4P-201ENST00000453285 LINC00518Q8N0U6 118 aa4.19□□□□□ -1.74
SDC4P-201ENST00000453285 C20orf203Q8NBC4 194 aa4.19□□□□□ -1.74
SDC4P-201ENST00000453285 FAM104AQ969W3 186 aa4.19□□□□□ -1.74
SDC4P-201ENST00000453285 IFI27L1Q96BM0 104 aa4.19□□□□□ -1.74
SDC4P-201ENST00000453285 B9D2Q9BPU9 175 aa4.19□□□□□ -1.74
SDC4P-201ENST00000453285 DAZ3Q9NR90 486 aaKnown RBP4.19□□□□□ -1.74
SDC4P-201ENST00000453285 HSPB8Q9UJY1 196 aa4.19□□□□□ -1.74
SDC4P-201ENST00000453285 F5H768 121 aa4.18□□□□□ -1.74
SDC4P-201ENST00000453285 PAX4O43316 350 aa4.18□□□□□ -1.74
SDC4P-201ENST00000453285 SMIM6P0DI80 62 aa4.18□□□□□ -1.74
SDC4P-201ENST00000453285 GYPEP15421 78 aa4.18□□□□□ -1.74
SDC4P-201ENST00000453285 G0S2P27469 103 aa4.18□□□□□ -1.74
SDC4P-201ENST00000453285 NANOS2P60321 138 aaKnown RBP4.18□□□□□ -1.74
SDC4P-201ENST00000453285 COTL1Q14019 142 aa4.18□□□□□ -1.74
SDC4P-201ENST00000453285 PET117Q6UWS5 81 aa4.18□□□□□ -1.74
SDC4P-201ENST00000453285 Q6ZTC4 211 aa4.18□□□□□ -1.74
SDC4P-201ENST00000453285 ERASQ7Z444 233 aa4.18□□□□□ -1.74
SDC4P-201ENST00000453285 MAP1LC3CQ9BXW4 147 aa4.18□□□□□ -1.74
SDC4P-201ENST00000453285 KRTAP3-3Q9BYR6 98 aa4.18□□□□□ -1.74
SDC4P-201ENST00000453285 KRTAP3-2Q9BYR7 98 aa4.18□□□□□ -1.74
SDC4P-201ENST00000453285 GTSF1LQ9H1H1 148 aa4.18□□□□□ -1.74
SDC4P-201ENST00000453285 ZMAT4Q9H898 229 aa4.18□□□□□ -1.74
SDC4P-201ENST00000453285 CYSLTR1Q9Y271 337 aa4.18□□□□□ -1.74
SDC4P-201ENST00000453285 STAB2Q8WWQ8 2551 aa4.17□□□□□ -1.74
SDC4P-201ENST00000453285 TRAV26-1A0A087WT03 109 aa4.17□□□□□ -1.74
SDC4P-201ENST00000453285 A0A0J9YY99 117 aa4.17□□□□□ -1.74
SDC4P-201ENST00000453285 LINC01549A6NIU2 74 aa4.17□□□□□ -1.74
SDC4P-201ENST00000453285 ATP5LO75964 103 aa4.17□□□□□ -1.74
SDC4P-201ENST00000453285 SCGB1D1O95968 90 aa4.17□□□□□ -1.74
SDC4P-201ENST00000453285 HTN3P15516 51 aa4.17□□□□□ -1.74
SDC4P-201ENST00000453285 LINC01545Q5VT33 79 aa4.17□□□□□ -1.74
SDC4P-201ENST00000453285 ATP6V0E2Q8NHE4 81 aa4.17□□□□□ -1.74
SDC4P-201ENST00000453285 C11orf45Q8TAV5 145 aa4.17□□□□□ -1.74
SDC4P-201ENST00000453285 SCGB3A1Q96QR1 104 aa4.17□□□□□ -1.74
SDC4P-201ENST00000453285 TIMM17AQ99595 171 aa4.17□□□□□ -1.74
SDC4P-201ENST00000453285 C12orf57Q99622 126 aa4.17□□□□□ -1.74
SDC4P-201ENST00000453285 PYGO1Q9Y3Y4 419 aa4.17□□□□□ -1.74
SDC4P-201ENST00000453285 PRKDCP78527 4128 aaKnown RBP4.17□□□□□ -1.74
SDC4P-201ENST00000453285 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.16□□□□□ -1.74
SDC4P-201ENST00000453285 A0A096LPF7 62 aa4.16□□□□□ -1.74
SDC4P-201ENST00000453285 TRBV6-8A0A0A6YYG3 113 aa4.16□□□□□ -1.74
SDC4P-201ENST00000453285 IGKV2-29A2NJV5 120 aaPredicted RBP4.16□□□□□ -1.74
SDC4P-201ENST00000453285 H3BNG1 76 aa4.16□□□□□ -1.74
SDC4P-201ENST00000453285 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.16□□□□□ -1.74
SDC4P-201ENST00000453285 DEFA6Q01524 100 aa4.16□□□□□ -1.74
SDC4P-201ENST00000453285 ODF1Q14990 250 aa4.16□□□□□ -1.74
SDC4P-201ENST00000453285 LGALS9CQ6DKI2 356 aa4.16□□□□□ -1.74
SDC4P-201ENST00000453285 TEX43Q6ZNM6 134 aa4.16□□□□□ -1.74
SDC4P-201ENST00000453285 BAALCQ8WXS3 180 aa4.16□□□□□ -1.74
SDC4P-201ENST00000453285 TMEM141Q96I45 108 aa4.16□□□□□ -1.74
SDC4P-201ENST00000453285 OPRPNQ99935 248 aaPredicted RBP4.16□□□□□ -1.74
SDC4P-201ENST00000453285 UBE2D4Q9Y2X8 147 aa4.16□□□□□ -1.74
SDC4P-201ENST00000453285 IGLV4-3A0A075B6K6 122 aa4.15□□□□□ -1.75
SDC4P-201ENST00000453285 A0A087WX48 190 aa4.15□□□□□ -1.75
SDC4P-201ENST00000453285 DEFB131BA0A096LNP1 70 aa4.15□□□□□ -1.75
SDC4P-201ENST00000453285 TRAV12-1A0A0B4J245 112 aa4.15□□□□□ -1.75
SDC4P-201ENST00000453285 H0Y8G0 127 aa4.15□□□□□ -1.75
SDC4P-201ENST00000453285 PRSS1P07477 247 aa4.15□□□□□ -1.75
SDC4P-201ENST00000453285 NHLRC4P0CG21 123 aaPredicted RBP4.15□□□□□ -1.75
SDC4P-201ENST00000453285 MRPL23Q16540 153 aaKnown RBP4.15□□□□□ -1.75
SDC4P-201ENST00000453285 TMEM97Q5BJF2 176 aa4.15□□□□□ -1.75
SDC4P-201ENST00000453285 ZC2HC1BQ5TFG8 222 aa4.15□□□□□ -1.75
SDC4P-201ENST00000453285 CEMP1Q6PRD7 247 aaPredicted RBP4.15□□□□□ -1.75
SDC4P-201ENST00000453285 MRPL52Q86TS9 123 aaKnown RBP4.15□□□□□ -1.75
SDC4P-201ENST00000453285 PMCHL2Q9BQD1 86 aa4.15□□□□□ -1.75
SDC4P-201ENST00000453285 TIMM21Q9BVV7 248 aa4.15□□□□□ -1.75
SDC4P-201ENST00000453285 TRBV25-1A0A075B6N4 114 aa4.14□□□□□ -1.75
SDC4P-201ENST00000453285 TRAV10A0A0B4J240 114 aa4.14□□□□□ -1.75
SDC4P-201ENST00000453285 PRSS29PA6NIE9 313 aa4.14□□□□□ -1.75
SDC4P-201ENST00000453285 H7C423 109 aa4.14□□□□□ -1.75
SDC4P-201ENST00000453285 NPSP0C0P6 89 aa4.14□□□□□ -1.75
SDC4P-201ENST00000453285 FGF6P10767 208 aa4.14□□□□□ -1.75
SDC4P-201ENST00000453285 MRPS36P82909 103 aaKnown RBP4.14□□□□□ -1.75
SDC4P-201ENST00000453285 PMVKQ15126 192 aa4.14□□□□□ -1.75
SDC4P-201ENST00000453285 Q6ZN92 141 aa4.14□□□□□ -1.75
SDC4P-201ENST00000453285 ATOH7Q8N100 152 aa4.14□□□□□ -1.75
SDC4P-201ENST00000453285 AMELXQ99217 191 aa4.14□□□□□ -1.75
SDC4P-201ENST00000453285 TMEM243Q9BU79 118 aa4.14□□□□□ -1.75
SDC4P-201ENST00000453285 CST9LQ9H4G1 147 aa4.14□□□□□ -1.75
SDC4P-201ENST00000453285 SPANXA1Q9NS26 97 aa4.14□□□□□ -1.75
SDC4P-201ENST00000453285 MRPL35Q9NZE8 188 aaKnown RBP4.14□□□□□ -1.75
SDC4P-201ENST00000453285 CSDC2Q9Y534 153 aaKnown RBP4.14□□□□□ -1.75
SDC4P-201ENST00000453285 ICOSQ9Y6W8 199 aa4.14□□□□□ -1.75
SDC4P-201ENST00000453285 MEGF8Q7Z7M0 2845 aa4.14□□□□□ -1.75
SDC4P-201ENST00000453285 IGLV4-69A0A075B6H9 119 aa4.13□□□□□ -1.75
SDC4P-201ENST00000453285 C20orf202A1L168 122 aa4.13□□□□□ -1.75
SDC4P-201ENST00000453285 F8VRH5 84 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms