RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 IGHV1-24A0A0C4DH33 117 aa6.14□□□□□ -1.43
COL8A1-203ENST00000452013 DLEU1O43261 78 aa6.14□□□□□ -1.43
COL8A1-203ENST00000452013 CRYGDP07320 174 aa6.14□□□□□ -1.43
COL8A1-203ENST00000452013 SMIM17P0DL12 118 aa6.14□□□□□ -1.43
COL8A1-203ENST00000452013 CACNG7P62955 275 aa6.14□□□□□ -1.43
COL8A1-203ENST00000452013 FAM104BQ5XKR9 115 aa6.14□□□□□ -1.43
COL8A1-203ENST00000452013 FER1L6-AS1Q8NA97 138 aa6.14□□□□□ -1.43
COL8A1-203ENST00000452013 ZNRF2Q8NHG8 242 aa6.14□□□□□ -1.43
COL8A1-203ENST00000452013 ORAOV1Q8WV07 137 aa6.14□□□□□ -1.43
COL8A1-203ENST00000452013 UPK3BQ9BT76 320 aa6.14□□□□□ -1.43
COL8A1-203ENST00000452013 TPPP3Q9BW30 176 aa6.14□□□□□ -1.43
COL8A1-203ENST00000452013 JPT2Q9H910 190 aa6.14□□□□□ -1.43
COL8A1-203ENST00000452013 PLECQ15149 4684 aaKnown RBP6.14□□□□□ -1.43
COL8A1-203ENST00000452013 A0A087WWL8 130 aa6.13□□□□□ -1.43
COL8A1-203ENST00000452013 M0R2N4 97 aa6.13□□□□□ -1.43
COL8A1-203ENST00000452013 NXPH4O95158 308 aa6.13□□□□□ -1.43
COL8A1-203ENST00000452013 IGLC6P0CF74 106 aa6.13□□□□□ -1.43
COL8A1-203ENST00000452013 FAM74A4Q5TZK3 123 aa6.13□□□□□ -1.43
COL8A1-203ENST00000452013 LINC01545Q5VT33 79 aa6.13□□□□□ -1.43
COL8A1-203ENST00000452013 UFSP1Q6NVU6 142 aa6.13□□□□□ -1.43
COL8A1-203ENST00000452013 PRSS3P2Q8NHM4 247 aa6.13□□□□□ -1.43
COL8A1-203ENST00000452013 URB1-AS1Q96HZ7 61 aa6.13□□□□□ -1.43
COL8A1-203ENST00000452013 MUC21A0A0G2JKD1 596 aa6.12□□□□□ -1.43
COL8A1-203ENST00000452013 LOC100131303A0A0U1RQF7 123 aa6.12□□□□□ -1.43
COL8A1-203ENST00000452013 NBDYA0A0U1RRE5 68 aa6.12□□□□□ -1.43
COL8A1-203ENST00000452013 MUC21A0A140T8X8 626 aa6.12□□□□□ -1.43
COL8A1-203ENST00000452013 LINC01546A6NGU7 62 aa6.12□□□□□ -1.43
COL8A1-203ENST00000452013 ZNF25P17030 456 aaPredicted RBP6.12□□□□□ -1.43
COL8A1-203ENST00000452013 TIRAPP58753 221 aa6.12□□□□□ -1.43
COL8A1-203ENST00000452013 TTC32Q5I0X7 151 aa6.12□□□□□ -1.43
COL8A1-203ENST00000452013 SLC25A34Q6PIV7 304 aa6.12□□□□□ -1.43
COL8A1-203ENST00000452013 LYZL1Q6UWQ5 148 aa6.12□□□□□ -1.43
COL8A1-203ENST00000452013 Q6ZSN1 163 aa6.12□□□□□ -1.43
COL8A1-203ENST00000452013 SMIM15Q7Z3B0 74 aa6.12□□□□□ -1.43
COL8A1-203ENST00000452013 ATP6V0E2Q8NHE4 81 aa6.12□□□□□ -1.43
COL8A1-203ENST00000452013 ALMS1Q8TCU4 4167 aa6.12□□□□□ -1.43
COL8A1-203ENST00000452013 SACSQ9NZJ4 4579 aa6.11□□□□□ -1.43
COL8A1-203ENST00000452013 DNAH1Q9P2D7 4330 aa6.11□□□□□ -1.43
COL8A1-203ENST00000452013 TRBV10-1A0A0K0K1A3 114 aa6.11□□□□□ -1.43
COL8A1-203ENST00000452013 GAGE12JA6NER3 117 aa6.11□□□□□ -1.43
COL8A1-203ENST00000452013 F5H697 171 aa6.11□□□□□ -1.43
COL8A1-203ENST00000452013 SIVA1O15304 175 aa6.11□□□□□ -1.43
COL8A1-203ENST00000452013 GAGE4Q13068 117 aa6.11□□□□□ -1.43
COL8A1-203ENST00000452013 GAGE5Q13069 117 aa6.11□□□□□ -1.43
COL8A1-203ENST00000452013 GAGE13Q4V321 117 aa6.11□□□□□ -1.43
COL8A1-203ENST00000452013 Q6ZR54 194 aa6.11□□□□□ -1.43
COL8A1-203ENST00000452013 C14orf178Q8N769 122 aaPredicted RBP6.11□□□□□ -1.43
COL8A1-203ENST00000452013 PRELID3AQ96N28 172 aa6.11□□□□□ -1.43
COL8A1-203ENST00000452013 AP1S3Q96PC3 154 aa6.11□□□□□ -1.43
COL8A1-203ENST00000452013 NXT2Q9NPJ8 142 aaKnown RBP6.11□□□□□ -1.43
COL8A1-203ENST00000452013 TRAV8-6A0A0B4J262 113 aa6.1□□□□□ -1.43
COL8A1-203ENST00000452013 PRSS47A8MTI9 375 aa6.1□□□□□ -1.43
COL8A1-203ENST00000452013 K7EMI3 77 aa6.1□□□□□ -1.43
COL8A1-203ENST00000452013 HBDP02042 147 aa6.1□□□□□ -1.43
COL8A1-203ENST00000452013 RPL36AP83881 106 aaKnown RBP6.1□□□□□ -1.43
COL8A1-203ENST00000452013 TWIST1Q15672 202 aa6.1□□□□□ -1.43
COL8A1-203ENST00000452013 ZNF56Q15929 161 aa6.1□□□□□ -1.43
COL8A1-203ENST00000452013 C1orf134Q5TEV5 83 aa6.1□□□□□ -1.43
COL8A1-203ENST00000452013 LINC00336Q6ZUF6 198 aa6.1□□□□□ -1.43
COL8A1-203ENST00000452013 RPL36ALQ969Q0 106 aaKnown RBP6.1□□□□□ -1.43
COL8A1-203ENST00000452013 GTSF1LQ9H1H1 148 aa6.1□□□□□ -1.43
COL8A1-203ENST00000452013 MAP1LC3AQ9H492 121 aa6.1□□□□□ -1.43
COL8A1-203ENST00000452013 LINC01549A6NIU2 74 aa6.09□□□□□ -1.43
COL8A1-203ENST00000452013 H7C1H1 209 aa6.09□□□□□ -1.43
COL8A1-203ENST00000452013 K7EP13 123 aa6.09□□□□□ -1.43
COL8A1-203ENST00000452013 EVI2AP22794 236 aa6.09□□□□□ -1.43
COL8A1-203ENST00000452013 CKS2P33552 79 aa6.09□□□□□ -1.43
COL8A1-203ENST00000452013 KIF25-AS1Q9Y6Z4 181 aa6.09□□□□□ -1.43
COL8A1-203ENST00000452013 TRBV7-3A0A075B6L6 115 aa6.08□□□□□ -1.44
COL8A1-203ENST00000452013 D6R8Y8 96 aa6.08□□□□□ -1.44
COL8A1-203ENST00000452013 PPP1R17O96001 155 aa6.08□□□□□ -1.44
COL8A1-203ENST00000452013 COX8AP10176 69 aa6.08□□□□□ -1.44
COL8A1-203ENST00000452013 SEC11AP67812 179 aa6.08□□□□□ -1.44
COL8A1-203ENST00000452013 MRPL51Q4U2R6 128 aaKnown RBP6.08□□□□□ -1.44
COL8A1-203ENST00000452013 LELP1Q5T871 98 aa6.08□□□□□ -1.44
COL8A1-203ENST00000452013 C6orf223Q8N319 242 aa6.08□□□□□ -1.44
COL8A1-203ENST00000452013 DNAJC30Q96LL9 226 aa6.08□□□□□ -1.44
COL8A1-203ENST00000452013 DPH3P1Q9H4G8 78 aa6.08□□□□□ -1.44
COL8A1-203ENST00000452013 MSRB1Q9NZV6 116 aa6.08□□□□□ -1.44
COL8A1-203ENST00000452013 VPS13DQ5THJ4 4388 aa6.07□□□□□ -1.44
COL8A1-203ENST00000452013 RYR3Q15413 4870 aa6.07□□□□□ -1.44
COL8A1-203ENST00000452013 IGHV3-38A0A0C4DH36 116 aa6.07□□□□□ -1.44
COL8A1-203ENST00000452013 ATP5LO75964 103 aa6.07□□□□□ -1.44
COL8A1-203ENST00000452013 MGPP08493 103 aa6.07□□□□□ -1.44
COL8A1-203ENST00000452013 G0S2P27469 103 aa6.07□□□□□ -1.44
COL8A1-203ENST00000452013 LINC00315P59091 139 aa6.07□□□□□ -1.44
COL8A1-203ENST00000452013 BATFQ16520 125 aa6.07□□□□□ -1.44
COL8A1-203ENST00000452013 LCE2DQ5TA82 110 aaPredicted RBP6.07□□□□□ -1.44
COL8A1-203ENST00000452013 Q9UF83 564 aa6.07□□□□□ -1.44
COL8A1-203ENST00000452013 TNFRSF18Q9Y5U5 241 aa6.07□□□□□ -1.44
COL8A1-203ENST00000452013 COX11Q9Y6N1 276 aa6.07□□□□□ -1.44
COL8A1-203ENST00000452013 RYR2Q92736 4967 aa6.06□□□□□ -1.44
COL8A1-203ENST00000452013 PRSS29PA6NIE9 313 aa6.06□□□□□ -1.44
COL8A1-203ENST00000452013 DNAH10OSP0CZ25 163 aa6.06□□□□□ -1.44
COL8A1-203ENST00000452013 LINC00694P0DN24 101 aa6.06□□□□□ -1.44
COL8A1-203ENST00000452013 FCER1GP30273 86 aa6.06□□□□□ -1.44
COL8A1-203ENST00000452013 IFI27P40305 119 aaPredicted RBP6.06□□□□□ -1.44
COL8A1-203ENST00000452013 UBE2D3P61077 147 aa6.06□□□□□ -1.44
COL8A1-203ENST00000452013 UBE2D2P62837 147 aa6.06□□□□□ -1.44
COL8A1-203ENST00000452013 UBE2V1Q13404 147 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms