RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 IGHV1-58A0A0C4DH39 117 aa12.65□□□□□ -0.38
SCUBE2-202ENST00000450649 FAM236AA0A1B0GUQ0 79 aa12.65□□□□□ -0.38
SCUBE2-202ENST00000450649 FAM236BA0A1B0GV22 79 aa12.65□□□□□ -0.38
SCUBE2-202ENST00000450649 A8MZ25 164 aa12.65□□□□□ -0.38
SCUBE2-202ENST00000450649 CD28P10747 220 aa12.65□□□□□ -0.38
SCUBE2-202ENST00000450649 MRPS36P82909 103 aaKnown RBP12.65□□□□□ -0.38
SCUBE2-202ENST00000450649 FAM104AQ969W3 186 aa12.64□□□□□ -0.39
SCUBE2-202ENST00000450649 USMG5Q96IX5 58 aa12.64□□□□□ -0.39
SCUBE2-202ENST00000450649 VPREB3Q9UKI3 123 aa12.64□□□□□ -0.39
SCUBE2-202ENST00000450649 NOTCH3Q9UM47 2321 aa12.64□□□□□ -0.39
SCUBE2-202ENST00000450649 CSPG4Q6UVK1 2322 aa12.63□□□□□ -0.39
SCUBE2-202ENST00000450649 RNASE13Q5GAN3 156 aaKnown RBP12.63□□□□□ -0.39
SCUBE2-202ENST00000450649 CEMP1Q6PRD7 247 aaPredicted RBP12.63□□□□□ -0.39
SCUBE2-202ENST00000450649 CELSR2Q9HCU4 2923 aa12.63□□□□□ -0.39
SCUBE2-202ENST00000450649 TRAV12-2A0A075B6T6 113 aa12.63□□□□□ -0.39
SCUBE2-202ENST00000450649 H3BUA1 57 aa12.63□□□□□ -0.39
SCUBE2-202ENST00000450649 TMEM95Q3KNT9 176 aa12.63□□□□□ -0.39
SCUBE2-202ENST00000450649 PPDPFQ9H3Y8 114 aa12.63□□□□□ -0.39
SCUBE2-202ENST00000450649 SORL1Q92673 2214 aa12.62□□□□□ -0.39
SCUBE2-202ENST00000450649 IGHV3OR16-10A0A075B7F0 116 aa12.62□□□□□ -0.39
SCUBE2-202ENST00000450649 VSIG2Q96IQ7 327 aa12.62□□□□□ -0.39
SCUBE2-202ENST00000450649 EDN2P20800 178 aa12.61□□□□□ -0.39
SCUBE2-202ENST00000450649 IGKV3-20P01619 116 aa12.61□□□□□ -0.39
SCUBE2-202ENST00000450649 PYGO1Q9Y3Y4 419 aa12.61□□□□□ -0.39
SCUBE2-202ENST00000450649 DAND5Q8N907 189 aa12.6□□□□□ -0.39
SCUBE2-202ENST00000450649 IMUPQ9GZP8 106 aa12.6□□□□□ -0.39
SCUBE2-202ENST00000450649 YAE1D1Q9NRH1 226 aa12.6□□□□□ -0.39
SCUBE2-202ENST00000450649 IGHG2P01859 326 aa12.6□□□□□ -0.39
SCUBE2-202ENST00000450649 ID1P41134 155 aa12.6□□□□□ -0.39
SCUBE2-202ENST00000450649 BRD3OSQ6XYD6 125 aa12.6□□□□□ -0.39
SCUBE2-202ENST00000450649 DUX5Q96PT3 197 aa12.59□□□□□ -0.39
SCUBE2-202ENST00000450649 ACYP1P07311 99 aa12.59□□□□□ -0.39
SCUBE2-202ENST00000450649 DAZ1Q9NQZ3 744 aaKnown RBP12.59□□□□□ -0.39
SCUBE2-202ENST00000450649 DCANP1Q8TF63 244 aa12.58□□□□□ -0.39
SCUBE2-202ENST00000450649 SMCR5Q8TEV8 140 aa12.58□□□□□ -0.4
SCUBE2-202ENST00000450649 UTP20O75691 2785 aaKnown RBP12.58□□□□□ -0.4
SCUBE2-202ENST00000450649 HIVEP3Q5T1R4 2406 aa12.58□□□□□ -0.4
SCUBE2-202ENST00000450649 PF4V1P10720 104 aa12.57□□□□□ -0.4
SCUBE2-202ENST00000450649 C9orf153Q5TBE3 101 aa12.57□□□□□ -0.4
SCUBE2-202ENST00000450649 CITED2Q99967 270 aaPredicted RBP12.57□□□□□ -0.4
SCUBE2-202ENST00000450649 POLQO75417 2590 aa12.57□□□□□ -0.4
SCUBE2-202ENST00000450649 IGHV1OR15-1A0A075B7D0 117 aa12.57□□□□□ -0.4
SCUBE2-202ENST00000450649 TINCRA0A1B0GVN0 87 aa12.57□□□□□ -0.4
SCUBE2-202ENST00000450649 LINC00694P0DN24 101 aa12.56□□□□□ -0.4
SCUBE2-202ENST00000450649 C3orf22Q8N5N4 141 aa12.56□□□□□ -0.4
SCUBE2-202ENST00000450649 IGHV3-73A0A0B4J1V6 119 aa12.55□□□□□ -0.4
SCUBE2-202ENST00000450649 LY6EQ16553 131 aa12.55□□□□□ -0.4
SCUBE2-202ENST00000450649 TIMM17BO60830 172 aa12.55□□□□□ -0.4
SCUBE2-202ENST00000450649 LY6DQ14210 128 aa12.55□□□□□ -0.4
SCUBE2-202ENST00000450649 A6NDX4 124 aa12.55□□□□□ -0.4
SCUBE2-202ENST00000450649 SPINK13Q1W4C9 94 aa12.55□□□□□ -0.4
SCUBE2-202ENST00000450649 NDUFA7O95182 113 aa12.54□□□□□ -0.4
SCUBE2-202ENST00000450649 LINC00643Q86TS7 51 aa12.54□□□□□ -0.4
SCUBE2-202ENST00000450649 IGLV1-40P01703 118 aa12.54□□□□□ -0.4
SCUBE2-202ENST00000450649 PROK1P58294 105 aa12.54□□□□□ -0.4
SCUBE2-202ENST00000450649 K7EMT4 169 aa12.53□□□□□ -0.4
SCUBE2-202ENST00000450649 USP9YO00507 2555 aaPredicted RBP12.53□□□□□ -0.4
SCUBE2-202ENST00000450649 H3BUX3 64 aa12.53□□□□□ -0.4
SCUBE2-202ENST00000450649 IGHV4-38-2P0DP08 117 aa12.53□□□□□ -0.4
SCUBE2-202ENST00000450649 BLCAPP62952 87 aa12.52□□□□□ -0.4
SCUBE2-202ENST00000450649 SETD2Q9BYW2 2564 aaPredicted RBP12.52□□□□□ -0.4
SCUBE2-202ENST00000450649 COX7A2LO14548 114 aa12.52□□□□□ -0.41
SCUBE2-202ENST00000450649 UQCRQO14949 82 aa12.52□□□□□ -0.41
SCUBE2-202ENST00000450649 DNAJC30Q96LL9 226 aa12.52□□□□□ -0.41
SCUBE2-202ENST00000450649 ABCA2Q9BZC7 2435 aa12.52□□□□□ -0.41
SCUBE2-202ENST00000450649 NRGNQ92686 78 aa12.51□□□□□ -0.41
SCUBE2-202ENST00000450649 UBE2D4Q9Y2X8 147 aa12.51□□□□□ -0.41
SCUBE2-202ENST00000450649 IGHV4-61A0A0C4DH41 118 aa12.51□□□□□ -0.41
SCUBE2-202ENST00000450649 DAZ2Q13117 558 aaKnown RBP12.51□□□□□ -0.41
SCUBE2-202ENST00000450649 DAZ4Q86SG3 579 aaKnown RBP12.51□□□□□ -0.41
SCUBE2-202ENST00000450649 DAZ3Q9NR90 486 aaKnown RBP12.51□□□□□ -0.41
SCUBE2-202ENST00000450649 Q9UF83 564 aa12.51□□□□□ -0.41
SCUBE2-202ENST00000450649 CDKN2A-AS1Q9UH64 79 aa12.51□□□□□ -0.41
SCUBE2-202ENST00000450649 LINC00308Q8TCZ7 52 aa12.5□□□□□ -0.41
SCUBE2-202ENST00000450649 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.5□□□□□ -0.41
SCUBE2-202ENST00000450649 IGKV2-29A2NJV5 120 aaPredicted RBP12.5□□□□□ -0.41
SCUBE2-202ENST00000450649 NDUFA1O15239 70 aa12.5□□□□□ -0.41
SCUBE2-202ENST00000450649 HERVK_113P63121 156 aa12.5□□□□□ -0.41
SCUBE2-202ENST00000450649 LINC00526Q96FQ7 95 aa12.5□□□□□ -0.41
SCUBE2-202ENST00000450649 CHCHD7Q9BUK0 85 aa12.5□□□□□ -0.41
SCUBE2-202ENST00000450649 C19orf84I3L1E1 186 aa12.49□□□□□ -0.41
SCUBE2-202ENST00000450649 CFHR3Q02985 330 aa12.49□□□□□ -0.41
SCUBE2-202ENST00000450649 CIRBPQ14011 172 aaKnown RBP12.49□□□□□ -0.41
SCUBE2-202ENST00000450649 PIMREGQ9BSJ6 248 aa12.49□□□□□ -0.41
SCUBE2-202ENST00000450649 A0A0U1RRA0 63 aa12.48□□□□□ -0.41
SCUBE2-202ENST00000450649 LOC107984640A0A0U1RRK4 108 aa12.48□□□□□ -0.41
SCUBE2-202ENST00000450649 SDIM1Q6ZPB5 146 aa12.48□□□□□ -0.41
SCUBE2-202ENST00000450649 Q8N2B8 174 aa12.48□□□□□ -0.41
SCUBE2-202ENST00000450649 KLK5Q9Y337 293 aaPredicted RBP12.48□□□□□ -0.41
SCUBE2-202ENST00000450649 ZANQ9Y493 2812 aa12.48□□□□□ -0.41
SCUBE2-202ENST00000450649 EDA2RQ9HAV5 297 aa12.48□□□□□ -0.41
SCUBE2-202ENST00000450649 BAALC-AS2P0C853 105 aa12.47□□□□□ -0.41
SCUBE2-202ENST00000450649 HTN1P15515 57 aa12.47□□□□□ -0.41
SCUBE2-202ENST00000450649 SNRPD3P62318 126 aaKnown RBP12.47□□□□□ -0.41
SCUBE2-202ENST00000450649 ZNF625Q96I27 306 aaPredicted RBP12.47□□□□□ -0.41
SCUBE2-202ENST00000450649 ATP5G1P05496 136 aa12.47□□□□□ -0.41
SCUBE2-202ENST00000450649 TLN2Q9Y4G6 2542 aa12.46□□□□□ -0.41
SCUBE2-202ENST00000450649 KNCNA6PVL3 124 aa12.46□□□□□ -0.41
SCUBE2-202ENST00000450649 C5orf38Q86SI9 138 aa12.46□□□□□ -0.41
SCUBE2-202ENST00000450649 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms