RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 A0A087WVE0 104 aa6.36□□□□□ -1.39
LSM5-208ENST00000450169 IGKV3D-7A0A0C4DH55 119 aa6.36□□□□□ -1.39
LSM5-208ENST00000450169 TIMM17BO60830 172 aa6.36□□□□□ -1.39
LSM5-208ENST00000450169 DNAL4O96015 105 aa6.36□□□□□ -1.39
LSM5-208ENST00000450169 MRPS36P82909 103 aaKnown RBP6.36□□□□□ -1.39
LSM5-208ENST00000450169 C15orf32Q32M92 178 aa6.36□□□□□ -1.39
LSM5-208ENST00000450169 Q6JHZ5 121 aa6.36□□□□□ -1.39
LSM5-208ENST00000450169 LINC00336Q6ZUF6 198 aa6.36□□□□□ -1.39
LSM5-208ENST00000450169 C9orf139Q6ZV77 190 aa6.36□□□□□ -1.39
LSM5-208ENST00000450169 VSIG2Q96IQ7 327 aa6.36□□□□□ -1.39
LSM5-208ENST00000450169 C20orf173Q96LM9 149 aa6.36□□□□□ -1.39
LSM5-208ENST00000450169 PRRC2AP48634 2157 aaKnown RBP6.35□□□□□ -1.39
LSM5-208ENST00000450169 TINCRA0A1B0GVN0 87 aa6.35□□□□□ -1.39
LSM5-208ENST00000450169 FHL2Q14192 279 aa6.35□□□□□ -1.39
LSM5-208ENST00000450169 MBD3L2Q8NHZ7 208 aaPredicted RBP6.35□□□□□ -1.39
LSM5-208ENST00000450169 ITLN2Q8WWU7 325 aaPredicted RBP6.35□□□□□ -1.39
LSM5-208ENST00000450169 ANKRD11Q6UB99 2663 aaPredicted RBP6.35□□□□□ -1.39
LSM5-208ENST00000450169 PTPRZ1P23471 2315 aaPredicted RBP6.35□□□□□ -1.39
LSM5-208ENST00000450169 A8MZ25 164 aa6.34□□□□□ -1.39
LSM5-208ENST00000450169 NDUFC2-KCTD14E9PQ53 114 aa6.34□□□□□ -1.39
LSM5-208ENST00000450169 RNASE1P07998 156 aaKnown RBP6.34□□□□□ -1.39
LSM5-208ENST00000450169 FAM74A4Q5TZK3 123 aa6.34□□□□□ -1.39
LSM5-208ENST00000450169 LINC01561Q8N1V8 128 aa6.34□□□□□ -1.39
LSM5-208ENST00000450169 MUC4Q99102 2169 aa6.34□□□□□ -1.39
LSM5-208ENST00000450169 CEP295Q9C0D2 2601 aa6.34□□□□□ -1.39
LSM5-208ENST00000450169 NDUFC2O95298 119 aa6.34□□□□□ -1.39
LSM5-208ENST00000450169 CD28P10747 220 aa6.34□□□□□ -1.39
LSM5-208ENST00000450169 DPM3Q9P2X0 92 aa6.34□□□□□ -1.39
LSM5-208ENST00000450169 MAP1BP46821 2468 aaKnown RBP6.34□□□□□ -1.39
LSM5-208ENST00000450169 RPL35AP18077 110 aaKnown RBP6.33□□□□□ -1.4
LSM5-208ENST00000450169 FAM27E3Q08E93 113 aa6.33□□□□□ -1.4
LSM5-208ENST00000450169 LY6G5BQ8NDX9 201 aa6.33□□□□□ -1.4
LSM5-208ENST00000450169 CSMD1Q96PZ7 3565 aa6.33□□□□□ -1.4
LSM5-208ENST00000450169 M0QY20 66 aa6.33□□□□□ -1.4
LSM5-208ENST00000450169 CLEC19AQ6UXS0 136 aa6.33□□□□□ -1.4
LSM5-208ENST00000450169 PRIMA1Q86XR5 153 aa6.33□□□□□ -1.4
LSM5-208ENST00000450169 Q8N2B8 174 aa6.33□□□□□ -1.4
LSM5-208ENST00000450169 DEFB1P60022 68 aa6.32□□□□□ -1.4
LSM5-208ENST00000450169 APRG1Q8IVJ8 170 aa6.32□□□□□ -1.4
LSM5-208ENST00000450169 C11orf44Q8N8P7 122 aa6.32□□□□□ -1.4
LSM5-208ENST00000450169 LINC00308Q8TCZ7 52 aa6.32□□□□□ -1.4
LSM5-208ENST00000450169 C9orf85Q96MD7 179 aa6.32□□□□□ -1.4
LSM5-208ENST00000450169 FAM218AQ96MZ4 157 aa6.32□□□□□ -1.4
LSM5-208ENST00000450169 NACAE9PAV3 2078 aa6.32□□□□□ -1.4
LSM5-208ENST00000450169 FAM223BA6NKX1 122 aa6.32□□□□□ -1.4
LSM5-208ENST00000450169 CIRBPQ14011 172 aaKnown RBP6.32□□□□□ -1.4
LSM5-208ENST00000450169 DGAT2L7PQ6IED9 249 aa6.32□□□□□ -1.4
LSM5-208ENST00000450169 TMEM243Q9BU79 118 aa6.32□□□□□ -1.4
LSM5-208ENST00000450169 LINC00846Q9NV44 126 aa6.32□□□□□ -1.4
LSM5-208ENST00000450169 PKIGQ9Y2B9 76 aa6.32□□□□□ -1.4
LSM5-208ENST00000450169 FAM236DA0A1B0GTK5 79 aa6.31□□□□□ -1.4
LSM5-208ENST00000450169 FAM236CP0DP71 79 aa6.31□□□□□ -1.4
LSM5-208ENST00000450169 FAM223AQ8IWN6 122 aa6.31□□□□□ -1.4
LSM5-208ENST00000450169 RP1L1Q8IWN7 2480 aaPredicted RBP6.31□□□□□ -1.4
LSM5-208ENST00000450169 WNK2Q9Y3S1 2297 aa6.31□□□□□ -1.4
LSM5-208ENST00000450169 IGHV7-81A0A0B4J1V7 117 aa6.3□□□□□ -1.4
LSM5-208ENST00000450169 PSMB8P28062 276 aa6.3□□□□□ -1.4
LSM5-208ENST00000450169 ZNF415Q09FC8 603 aa6.3□□□□□ -1.4
LSM5-208ENST00000450169 FDCSPQ8NFU4 85 aa6.3□□□□□ -1.4
LSM5-208ENST00000450169 FAM110DQ8TAY7 271 aaPredicted RBP6.3□□□□□ -1.4
LSM5-208ENST00000450169 RNASE6Q93091 150 aaKnown RBP6.3□□□□□ -1.4
LSM5-208ENST00000450169 FAM104AQ969W3 186 aa6.3□□□□□ -1.4
LSM5-208ENST00000450169 Q9HAA7 133 aa6.3□□□□□ -1.4
LSM5-208ENST00000450169 C14orf132Q9NPU4 83 aa6.3□□□□□ -1.4
LSM5-208ENST00000450169 UBE2D4Q9Y2X8 147 aa6.3□□□□□ -1.4
LSM5-208ENST00000450169 APC2O95996 2303 aa6.3□□□□□ -1.4
LSM5-208ENST00000450169 PIEZO2Q9H5I5 2752 aa6.3□□□□□ -1.4
LSM5-208ENST00000450169 TRAV12-2A0A075B6T6 113 aa6.3□□□□□ -1.4
LSM5-208ENST00000450169 EPM2AB3EWF7 344 aa6.3□□□□□ -1.4
LSM5-208ENST00000450169 F6UB75 175 aa6.3□□□□□ -1.4
LSM5-208ENST00000450169 NDUFA1O15239 70 aa6.3□□□□□ -1.4
LSM5-208ENST00000450169 ECSCRQ19T08 205 aa6.3□□□□□ -1.4
LSM5-208ENST00000450169 RNASE13Q5GAN3 156 aaKnown RBP6.3□□□□□ -1.4
LSM5-208ENST00000450169 TMEM86BQ8N661 226 aa6.3□□□□□ -1.4
LSM5-208ENST00000450169 PRORYQ9H606 182 aa6.3□□□□□ -1.4
LSM5-208ENST00000450169 SERP1Q9Y6X1 66 aa6.3□□□□□ -1.4
LSM5-208ENST00000450169 BSPH1Q075Z2 132 aa6.29□□□□□ -1.4
LSM5-208ENST00000450169 FAM215AQ9Y5M1 114 aa6.29□□□□□ -1.4
LSM5-208ENST00000450169 ROS1P08922 2347 aa6.29□□□□□ -1.4
LSM5-208ENST00000450169 ACACAQ13085 2346 aa6.29□□□□□ -1.4
LSM5-208ENST00000450169 COPS9Q8WXC6 57 aa6.29□□□□□ -1.4
LSM5-208ENST00000450169 SOCS3O14543 225 aa6.28□□□□□ -1.4
LSM5-208ENST00000450169 IGHG2P01859 326 aa6.28□□□□□ -1.4
LSM5-208ENST00000450169 SEC61GP60059 68 aa6.28□□□□□ -1.4
LSM5-208ENST00000450169 Q8N6K4 173 aa6.28□□□□□ -1.4
LSM5-208ENST00000450169 RBMY1BA6NDE4 496 aaKnown RBP6.28□□□□□ -1.4
LSM5-208ENST00000450169 RBMY1EA6NEQ0 496 aaKnown RBP6.28□□□□□ -1.4
LSM5-208ENST00000450169 RBMY1DP0C7P1 496 aaKnown RBP6.28□□□□□ -1.4
LSM5-208ENST00000450169 RBMY1A1P0DJD3 496 aaKnown RBP6.28□□□□□ -1.4
LSM5-208ENST00000450169 RBMY1CP0DJD4 496 aa6.28□□□□□ -1.4
LSM5-208ENST00000450169 RBMY1FQ15415 496 aaKnown RBP6.28□□□□□ -1.4
LSM5-208ENST00000450169 C9orf129Q5T035 196 aaKnown RBP6.28□□□□□ -1.4
LSM5-208ENST00000450169 C20orf197Q8N268 126 aa6.28□□□□□ -1.4
LSM5-208ENST00000450169 RELNP78509 3460 aa6.28□□□□□ -1.4
LSM5-208ENST00000450169 TACC2O95359 2948 aa6.27□□□□□ -1.41
LSM5-208ENST00000450169 A0A0U1RRA0 63 aa6.27□□□□□ -1.41
LSM5-208ENST00000450169 KLLNB2CW77 178 aa6.27□□□□□ -1.41
LSM5-208ENST00000450169 TRBV12-3P01733 135 aa6.27□□□□□ -1.41
LSM5-208ENST00000450169 HOXD3P31249 432 aaPredicted RBP6.27□□□□□ -1.41
LSM5-208ENST00000450169 SOSTDC1Q6X4U4 206 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms