RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 COX8CQ7Z4L0 72 aa4.37□□□□□ -1.71
RBM39-218ENST00000449489 Q8N9P0 234 aaPredicted RBP4.37□□□□□ -1.71
RBM39-218ENST00000449489 AQP10Q96PS8 301 aa4.37□□□□□ -1.71
RBM39-218ENST00000449489 GFRA4Q9GZZ7 299 aa4.37□□□□□ -1.71
RBM39-218ENST00000449489 MED28Q9H204 178 aa4.37□□□□□ -1.71
RBM39-218ENST00000449489 CARHSP1Q9Y2V2 147 aaKnown RBP4.37□□□□□ -1.71
RBM39-218ENST00000449489 V9GYH0 126 aa4.37□□□□□ -1.71
RBM39-218ENST00000449489 IGLV4-60A0A075B6I1 120 aa4.36□□□□□ -1.71
RBM39-218ENST00000449489 FAM25EA8MYX2 175 aa4.36□□□□□ -1.71
RBM39-218ENST00000449489 M0R381 172 aa4.36□□□□□ -1.71
RBM39-218ENST00000449489 IGLV7-43P04211 117 aa4.36□□□□□ -1.71
RBM39-218ENST00000449489 RAB5CP51148 216 aa4.36□□□□□ -1.71
RBM39-218ENST00000449489 HIGD2BQ4VC39 106 aa4.36□□□□□ -1.71
RBM39-218ENST00000449489 C1orf137Q5JT78 98 aa4.36□□□□□ -1.71
RBM39-218ENST00000449489 PRNTQ86SH4 94 aa4.36□□□□□ -1.71
RBM39-218ENST00000449489 EPDR1Q9UM22 224 aa4.36□□□□□ -1.71
RBM39-218ENST00000449489 H3BMQ9 156 aa4.35□□□□□ -1.71
RBM39-218ENST00000449489 CRIP1P50238 77 aa4.35□□□□□ -1.71
RBM39-218ENST00000449489 TMBIM6P55061 237 aa4.35□□□□□ -1.71
RBM39-218ENST00000449489 LINC01547P58512 204 aaPredicted RBP4.35□□□□□ -1.71
RBM39-218ENST00000449489 ZNF56Q15929 161 aa4.35□□□□□ -1.71
RBM39-218ENST00000449489 A0A1W2PNN7 141 aa4.34□□□□□ -1.71
RBM39-218ENST00000449489 A0A1W2PPV4 95 aa4.34□□□□□ -1.71
RBM39-218ENST00000449489 GRIFINA4D1Z8 144 aa4.34□□□□□ -1.71
RBM39-218ENST00000449489 CENPXA8MT69 81 aa4.34□□□□□ -1.71
RBM39-218ENST00000449489 BTCP35070 178 aa4.34□□□□□ -1.71
RBM39-218ENST00000449489 SULT1A2P50226 295 aa4.34□□□□□ -1.71
RBM39-218ENST00000449489 UBE2D1P51668 147 aa4.34□□□□□ -1.71
RBM39-218ENST00000449489 CARD19Q96LW7 228 aa4.34□□□□□ -1.71
RBM39-218ENST00000449489 TMEM243Q9BU79 118 aa4.34□□□□□ -1.71
RBM39-218ENST00000449489 ARL2-SNX15V9GYD0 113 aa4.34□□□□□ -1.71
RBM39-218ENST00000449489 TRAV34A0A0B4J273 112 aa4.33□□□□□ -1.72
RBM39-218ENST00000449489 STAG3L2P0CL84 134 aa4.33□□□□□ -1.72
RBM39-218ENST00000449489 STAG3L3P0CL85 134 aa4.33□□□□□ -1.72
RBM39-218ENST00000449489 TPRXLQ17RH7 258 aa4.33□□□□□ -1.72
RBM39-218ENST00000449489 FAM162BQ5T6X4 162 aa4.33□□□□□ -1.72
RBM39-218ENST00000449489 TSKUQ8WUA8 353 aa4.33□□□□□ -1.72
RBM39-218ENST00000449489 PGLYRP4Q96LB8 373 aa4.33□□□□□ -1.72
RBM39-218ENST00000449489 ZFP30Q9Y2G7 519 aa4.33□□□□□ -1.72
RBM39-218ENST00000449489 SSPOA2VEC9 5147 aa4.32□□□□□ -1.72
RBM39-218ENST00000449489 IGHV1-58A0A0C4DH39 117 aa4.32□□□□□ -1.72
RBM39-218ENST00000449489 LOC107984640A0A0U1RRK4 108 aa4.32□□□□□ -1.72
RBM39-218ENST00000449489 M0R036 132 aa4.32□□□□□ -1.72
RBM39-218ENST00000449489 EIF3GO75821 320 aaKnown RBP eCLIP4.32□□□□□ -1.72
RBM39-218ENST00000449489 CXCL1P09341 107 aa4.32□□□□□ -1.72
RBM39-218ENST00000449489 ARL14EPLP0DKL9 152 aa4.32□□□□□ -1.72
RBM39-218ENST00000449489 FGF6P10767 208 aa4.32□□□□□ -1.72
RBM39-218ENST00000449489 SYCNQ0VAF6 134 aa4.32□□□□□ -1.72
RBM39-218ENST00000449489 ZNF674Q2M3X9 581 aa4.32□□□□□ -1.72
RBM39-218ENST00000449489 SCGB1C1Q8TD33 95 aa4.32□□□□□ -1.72
RBM39-218ENST00000449489 CHCHD10Q8WYQ3 142 aaPredicted RBP4.32□□□□□ -1.72
RBM39-218ENST00000449489 ZNF471Q9BX82 626 aaPredicted RBP4.32□□□□□ -1.72
RBM39-218ENST00000449489 TMEM167BQ9NRX6 74 aa4.32□□□□□ -1.72
RBM39-218ENST00000449489 A0A1W2PRE2 83 aa4.31□□□□□ -1.72
RBM39-218ENST00000449489 SH2D1AO60880 128 aa4.31□□□□□ -1.72
RBM39-218ENST00000449489 RPL12P30050 165 aaKnown RBP4.31□□□□□ -1.72
RBM39-218ENST00000449489 S100A5P33763 92 aa4.31□□□□□ -1.72
RBM39-218ENST00000449489 C9orf116Q5BN46 136 aaPredicted RBP4.31□□□□□ -1.72
RBM39-218ENST00000449489 TRIQKQ629K1 86 aa4.31□□□□□ -1.72
RBM39-218ENST00000449489 PET117Q6UWS5 81 aa4.31□□□□□ -1.72
RBM39-218ENST00000449489 Q86TA4 180 aa4.31□□□□□ -1.72
RBM39-218ENST00000449489 IGKV2D-30A0A075B6S6 120 aa4.3□□□□□ -1.72
RBM39-218ENST00000449489 M0QY20 66 aa4.3□□□□□ -1.72
RBM39-218ENST00000449489 UBE2L6O14933 153 aa4.3□□□□□ -1.72
RBM39-218ENST00000449489 SNAI2O43623 268 aa4.3□□□□□ -1.72
RBM39-218ENST00000449489 OR5AL1P0C617 328 aa4.3□□□□□ -1.72
RBM39-218ENST00000449489 GCHFRP30047 84 aa4.3□□□□□ -1.72
RBM39-218ENST00000449489 EIF5AP63241 154 aaKnown RBP4.3□□□□□ -1.72
RBM39-218ENST00000449489 CYCSP99999 105 aaKnown RBP4.3□□□□□ -1.72
RBM39-218ENST00000449489 PHF5AQ7RTV0 110 aaKnown RBP4.3□□□□□ -1.72
RBM39-218ENST00000449489 OR10AG1Q8NH19 301 aa4.3□□□□□ -1.72
RBM39-218ENST00000449489 HIST1H2BAQ96A08 127 aa4.3□□□□□ -1.72
RBM39-218ENST00000449489 ISOC2Q96AB3 205 aa4.3□□□□□ -1.72
RBM39-218ENST00000449489 NKX6-2Q9C056 277 aaPredicted RBP4.3□□□□□ -1.72
RBM39-218ENST00000449489 RPP21Q9H633 154 aaKnown RBP4.3□□□□□ -1.72
RBM39-218ENST00000449489 IGLV5-45A0A087WSX0 123 aa4.29□□□□□ -1.72
RBM39-218ENST00000449489 HMGB3O15347 200 aaKnown RBP4.29□□□□□ -1.72
RBM39-218ENST00000449489 TSPAN13O95857 204 aa4.29□□□□□ -1.72
RBM39-218ENST00000449489 SMIM17P0DL12 118 aa4.29□□□□□ -1.72
RBM39-218ENST00000449489 CDC34P49427 236 aaPredicted RBP4.29□□□□□ -1.72
RBM39-218ENST00000449489 CTAG1AP78358 180 aa4.29□□□□□ -1.72
RBM39-218ENST00000449489 SEC22CQ9BRL7 303 aa4.29□□□□□ -1.72
RBM39-218ENST00000449489 HSPB11Q9Y547 144 aa4.29□□□□□ -1.72
RBM39-218ENST00000449489 USH2AO75445 5202 aa4.29□□□□□ -1.72
RBM39-218ENST00000449489 IGLV4-69A0A075B6H9 119 aa4.28□□□□□ -1.72
RBM39-218ENST00000449489 A0A087WZ39 114 aa4.28□□□□□ -1.72
RBM39-218ENST00000449489 TMSB15BA0A087X1C1 80 aa4.28□□□□□ -1.72
RBM39-218ENST00000449489 H7C423 109 aa4.28□□□□□ -1.72
RBM39-218ENST00000449489 PEX7O00628 323 aa4.28□□□□□ -1.72
RBM39-218ENST00000449489 APOMO95445 188 aa4.28□□□□□ -1.72
RBM39-218ENST00000449489 CXorf1O96002 111 aa4.28□□□□□ -1.72
RBM39-218ENST00000449489 RPL24P83731 157 aaKnown RBP4.28□□□□□ -1.72
RBM39-218ENST00000449489 SPANXN1Q5VSR9 72 aa4.28□□□□□ -1.72
RBM39-218ENST00000449489 AP1S3Q96PC3 154 aa4.28□□□□□ -1.72
RBM39-218ENST00000449489 SDHCQ99643 169 aaPredicted RBP4.28□□□□□ -1.72
RBM39-218ENST00000449489 IGKV3OR2-268A0A0C4DH90 116 aa4.27□□□□□ -1.73
RBM39-218ENST00000449489 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.27□□□□□ -1.73
RBM39-218ENST00000449489 MBP02144 154 aa4.27□□□□□ -1.73
RBM39-218ENST00000449489 CRYGAP11844 174 aa4.27□□□□□ -1.73
RBM39-218ENST00000449489 MEF2BQ02080 365 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms