RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 C3orf56Q8N813 242 aa7.59□□□□□ -1.19
VIPAS39-203ENST00000448935 C20orf203Q8NBC4 194 aa7.59□□□□□ -1.19
VIPAS39-203ENST00000448935 BAALCQ8WXS3 180 aa7.59□□□□□ -1.19
VIPAS39-203ENST00000448935 FAM30AQ9NZY2 134 aa7.59□□□□□ -1.19
VIPAS39-203ENST00000448935 ZMAT5Q9UDW3 170 aaKnown RBP7.59□□□□□ -1.19
VIPAS39-203ENST00000448935 CHTOPQ9Y3Y2 248 aaKnown RBP7.59□□□□□ -1.19
VIPAS39-203ENST00000448935 TRGV2A0A075B6R0 118 aa7.58□□□□□ -1.2
VIPAS39-203ENST00000448935 PLAC8L1A1L4L8 177 aa7.58□□□□□ -1.2
VIPAS39-203ENST00000448935 IGIPA6NJ69 53 aa7.58□□□□□ -1.2
VIPAS39-203ENST00000448935 NPSP0C0P6 89 aa7.58□□□□□ -1.2
VIPAS39-203ENST00000448935 PTTG1IPP53801 180 aa7.58□□□□□ -1.2
VIPAS39-203ENST00000448935 RPL36AP83881 106 aaKnown RBP7.58□□□□□ -1.2
VIPAS39-203ENST00000448935 RPL36ALQ969Q0 106 aaKnown RBP7.58□□□□□ -1.2
VIPAS39-203ENST00000448935 MRPL35Q9NZE8 188 aaKnown RBP7.58□□□□□ -1.2
VIPAS39-203ENST00000448935 K7EQD1 137 aa7.57□□□□□ -1.2
VIPAS39-203ENST00000448935 CTAG1AP78358 180 aa7.57□□□□□ -1.2
VIPAS39-203ENST00000448935 COTL1Q14019 142 aa7.57□□□□□ -1.2
VIPAS39-203ENST00000448935 PMVKQ15126 192 aa7.57□□□□□ -1.2
VIPAS39-203ENST00000448935 C12orf54Q6X4T0 127 aa7.57□□□□□ -1.2
VIPAS39-203ENST00000448935 SPATA3Q8NHX4 192 aa7.57□□□□□ -1.2
VIPAS39-203ENST00000448935 TRBV7-3A0A075B6L6 115 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 DLEU1O43261 78 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 P0DMU3 169 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 FAM231AP0DMU4 169 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 FAM231CP0DMU5 169 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 RPL39P62891 51 aaKnown RBP7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 ZC2HC1BQ5TFG8 222 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 Q6ZSN1 163 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 STPG4Q8N801 248 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 ZNF479Q96JC4 524 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 C2orf88Q9BSF0 95 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 HHLA3Q9XRX5 114 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 PYGO1Q9Y3Y4 419 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 GAGE12BA1L429 117 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 GAGE7O76087 117 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 GAGE12FP0CL80 117 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 GAGE12GP0CL81 117 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 GAGE12IP0CL82 117 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 CRYBA4P53673 196 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 DAZ4Q86SG3 579 aaKnown RBP7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 SNHG12Q9BXW3 62 aa7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 DAZ3Q9NR90 486 aaKnown RBP7.56□□□□□ -1.2
VIPAS39-203ENST00000448935 TRBV6-4A0A1B0GX49 114 aa7.55□□□□□ -1.2
VIPAS39-203ENST00000448935 SIVA1O15304 175 aa7.55□□□□□ -1.2
VIPAS39-203ENST00000448935 SMAGPQ0VAQ4 97 aa7.55□□□□□ -1.2
VIPAS39-203ENST00000448935 BOD1L2Q8IYS8 172 aa7.55□□□□□ -1.2
VIPAS39-203ENST00000448935 ZNRF2Q8NHG8 242 aa7.55□□□□□ -1.2
VIPAS39-203ENST00000448935 TRGV4A0A0C4DH28 118 aa7.54□□□□□ -1.2
VIPAS39-203ENST00000448935 NMUP48645 174 aa7.54□□□□□ -1.2
VIPAS39-203ENST00000448935 TMEM97Q5BJF2 176 aa7.54□□□□□ -1.2
VIPAS39-203ENST00000448935 CST9LQ9H4G1 147 aa7.54□□□□□ -1.2
VIPAS39-203ENST00000448935 SPANXA1Q9NS26 97 aa7.54□□□□□ -1.2
VIPAS39-203ENST00000448935 LYRM9A8MSI8 78 aa7.53□□□□□ -1.2
VIPAS39-203ENST00000448935 PLA2G1BP04054 148 aaKnown RBP7.53□□□□□ -1.2
VIPAS39-203ENST00000448935 LINC00612Q8N6U2 182 aa7.53□□□□□ -1.2
VIPAS39-203ENST00000448935 SLC25A29Q8N8R3 303 aa7.53□□□□□ -1.2
VIPAS39-203ENST00000448935 DEFB104AQ8WTQ1 72 aa7.53□□□□□ -1.2
VIPAS39-203ENST00000448935 SPATA25Q9BR10 227 aa7.53□□□□□ -1.2
VIPAS39-203ENST00000448935 PRADC1Q9BSG0 188 aa7.53□□□□□ -1.2
VIPAS39-203ENST00000448935 VCX2Q9H322 139 aa7.53□□□□□ -1.2
VIPAS39-203ENST00000448935 MIFP14174 115 aa7.52□□□□□ -1.2
VIPAS39-203ENST00000448935 HERVK_113P61574 105 aa7.52□□□□□ -1.2
VIPAS39-203ENST00000448935 IGHV4-30-4P0DP06 118 aa7.52□□□□□ -1.21
VIPAS39-203ENST00000448935 FGF6P10767 208 aa7.52□□□□□ -1.21
VIPAS39-203ENST00000448935 EMP1P54849 157 aa7.52□□□□□ -1.21
VIPAS39-203ENST00000448935 UBE2D3P61077 147 aa7.52□□□□□ -1.21
VIPAS39-203ENST00000448935 UBE2D2P62837 147 aa7.52□□□□□ -1.21
VIPAS39-203ENST00000448935 COL5A1-AS1Q5SY13 56 aa7.52□□□□□ -1.21
VIPAS39-203ENST00000448935 PHLDA1Q8WV24 401 aaPredicted RBP7.52□□□□□ -1.21
VIPAS39-203ENST00000448935 CHCHD7Q9BUK0 85 aa7.52□□□□□ -1.21
VIPAS39-203ENST00000448935 TIMM21Q9BVV7 248 aa7.52□□□□□ -1.21
VIPAS39-203ENST00000448935 IGLV4-3A0A075B6K6 122 aa7.51□□□□□ -1.21
VIPAS39-203ENST00000448935 BATFQ16520 125 aa7.51□□□□□ -1.21
VIPAS39-203ENST00000448935 DEFB135Q30KP9 77 aa7.51□□□□□ -1.21
VIPAS39-203ENST00000448935 PRIMA1Q86XR5 153 aa7.51□□□□□ -1.21
VIPAS39-203ENST00000448935 OR11H2Q8NH07 326 aa7.51□□□□□ -1.21
VIPAS39-203ENST00000448935 GTSF1LQ9H1H1 148 aa7.51□□□□□ -1.21
VIPAS39-203ENST00000448935 Q9UF83 564 aa7.51□□□□□ -1.21
VIPAS39-203ENST00000448935 IGHV3-38A0A0C4DH36 116 aa7.5□□□□□ -1.21
VIPAS39-203ENST00000448935 E9PLD3 99 aa7.5□□□□□ -1.21
VIPAS39-203ENST00000448935 EGFEM1PQ0D2K5 195 aa7.5□□□□□ -1.21
VIPAS39-203ENST00000448935 NFE4Q86UQ8 179 aa7.5□□□□□ -1.21
VIPAS39-203ENST00000448935 HIGD1BQ9P298 99 aa7.5□□□□□ -1.21
VIPAS39-203ENST00000448935 UBE2D4Q9Y2X8 147 aa7.5□□□□□ -1.21
VIPAS39-203ENST00000448935 JMJD1CQ15652 2540 aa7.5□□□□□ -1.21
VIPAS39-203ENST00000448935 IGLV4-69A0A075B6H9 119 aa7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 IGKV2D-26A0A0A0MRZ7 120 aa7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 GAGE12JA6NER3 117 aa7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 C11orf86A6NJI1 115 aa7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 A8MZ25 164 aa7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 DEFB130BP0DP73 79 aa7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 DEFB130AP0DP74 79 aa7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 HINT1P49773 126 aaPredicted RBP7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 MRPS36P82909 103 aaKnown RBP7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 GAGE1Q13065 139 aa7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 GAGE4Q13068 117 aa7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 GAGE5Q13069 117 aa7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 FHL2Q14192 279 aa7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 DGAT2L7PQ6IED9 249 aa7.49□□□□□ -1.21
VIPAS39-203ENST00000448935 PCP2Q8IVA1 136 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms