RNA–Protein interactions for RNA: ENST00000448572.1

SSBP3-209, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-209ENST00000448572 LYPD6BQ8NI32 183 aa6.47□□□□□ -1.37
SSBP3-209ENST00000448572 SMIM12Q96EX1 92 aa6.47□□□□□ -1.37
SSBP3-209ENST00000448572 BTF3L4Q96K17 158 aa6.47□□□□□ -1.37
SSBP3-209ENST00000448572 FAM210AQ96ND0 272 aa6.47□□□□□ -1.37
SSBP3-209ENST00000448572 ALG5Q9Y673 324 aa6.47□□□□□ -1.37
SSBP3-209ENST00000448572 LRP2P98164 4655 aa6.46□□□□□ -1.37
SSBP3-209ENST00000448572 MUC21A0A0G2JKD1 596 aa6.46□□□□□ -1.38
SSBP3-209ENST00000448572 MUC21A0A140T8X8 626 aa6.46□□□□□ -1.38
SSBP3-209ENST00000448572 SLPIP03973 132 aa6.46□□□□□ -1.38
SSBP3-209ENST00000448572 ZNF25P17030 456 aaPredicted RBP6.46□□□□□ -1.38
SSBP3-209ENST00000448572 KRTAP10-8P60410 259 aa6.46□□□□□ -1.38
SSBP3-209ENST00000448572 TEX261Q6UWH6 196 aa6.46□□□□□ -1.38
SSBP3-209ENST00000448572 TMUB2Q71RG4 321 aa6.46□□□□□ -1.38
SSBP3-209ENST00000448572 SMIM15Q7Z3B0 74 aa6.46□□□□□ -1.38
SSBP3-209ENST00000448572 ZNF664Q8N3J9 261 aa6.46□□□□□ -1.38
SSBP3-209ENST00000448572 C15orf56Q8N910 161 aa6.46□□□□□ -1.38
SSBP3-209ENST00000448572 PRSS3P2Q8NHM4 247 aa6.46□□□□□ -1.38
SSBP3-209ENST00000448572 SFT2D1Q8WV19 159 aa6.46□□□□□ -1.38
SSBP3-209ENST00000448572 ISOC2Q96AB3 205 aa6.46□□□□□ -1.38
SSBP3-209ENST00000448572 TMEM101Q96IK0 257 aa6.46□□□□□ -1.38
SSBP3-209ENST00000448572 RNF213Q63HN8 5207 aa6.46□□□□□ -1.38
SSBP3-209ENST00000448572 PKHD1L1Q86WI1 4243 aa6.45□□□□□ -1.38
SSBP3-209ENST00000448572 IGKV3OR2-268A0A0C4DH90 116 aa6.45□□□□□ -1.38
SSBP3-209ENST00000448572 TEX46H3BTG2 121 aa6.45□□□□□ -1.38
SSBP3-209ENST00000448572 ZNF561-AS1K7EIQ3 104 aa6.45□□□□□ -1.38
SSBP3-209ENST00000448572 GAS8-AS1O95177 125 aa6.45□□□□□ -1.38
SSBP3-209ENST00000448572 HIGD2BQ4VC39 106 aa6.45□□□□□ -1.38
SSBP3-209ENST00000448572 RNASEKQ6P5S7 137 aaKnown RBP6.45□□□□□ -1.38
SSBP3-209ENST00000448572 OR2D3Q8NGH3 330 aa6.45□□□□□ -1.38
SSBP3-209ENST00000448572 CHCHD10Q8WYQ3 142 aaPredicted RBP6.45□□□□□ -1.38
SSBP3-209ENST00000448572 IGHV1-58A0A0C4DH39 117 aa6.44□□□□□ -1.38
SSBP3-209ENST00000448572 SCO2A0A1W2PP80 73 aa6.44□□□□□ -1.38
SSBP3-209ENST00000448572 EIF5AP63241 154 aaKnown RBP6.44□□□□□ -1.38
SSBP3-209ENST00000448572 KCNRGQ8N5I3 272 aa6.44□□□□□ -1.38
SSBP3-209ENST00000448572 TSKUQ8WUA8 353 aa6.44□□□□□ -1.38
SSBP3-209ENST00000448572 CARD19Q96LW7 228 aa6.44□□□□□ -1.38
SSBP3-209ENST00000448572 PSORS1C2Q9UIG4 136 aa6.44□□□□□ -1.38
SSBP3-209ENST00000448572 A0A096LNI7 61 aa6.43□□□□□ -1.38
SSBP3-209ENST00000448572 TRAV26-2A0A0B4J265 109 aa6.43□□□□□ -1.38
SSBP3-209ENST00000448572 IFNA1P01562 189 aa6.43□□□□□ -1.38
SSBP3-209ENST00000448572 APCSP02743 223 aa6.43□□□□□ -1.38
SSBP3-209ENST00000448572 IGLC6P0CF74 106 aa6.43□□□□□ -1.38
SSBP3-209ENST00000448572 RPL35P42766 123 aaKnown RBP6.43□□□□□ -1.38
SSBP3-209ENST00000448572 SMAGPQ0VAQ4 97 aa6.43□□□□□ -1.38
SSBP3-209ENST00000448572 MBD3L1Q8WWY6 194 aa6.43□□□□□ -1.38
SSBP3-209ENST00000448572 MANBALQ9NQG1 85 aa6.43□□□□□ -1.38
SSBP3-209ENST00000448572 H2AFB1P0C5Y9 115 aa6.42□□□□□ -1.38
SSBP3-209ENST00000448572 SRSF9Q13242 221 aaKnown RBP eCLIP6.42□□□□□ -1.38
SSBP3-209ENST00000448572 SS18Q15532 418 aa6.42□□□□□ -1.38
SSBP3-209ENST00000448572 EIF5AL1Q6IS14 154 aaKnown RBP6.42□□□□□ -1.38
SSBP3-209ENST00000448572 OR5A1Q8NGJ0 315 aa6.42□□□□□ -1.38
SSBP3-209ENST00000448572 FAM213BQ8TBF2 198 aa6.42□□□□□ -1.38
SSBP3-209ENST00000448572 GFRA4Q9GZZ7 299 aa6.42□□□□□ -1.38
SSBP3-209ENST00000448572 LOC107984640A0A0U1RRK4 108 aa6.41□□□□□ -1.38
SSBP3-209ENST00000448572 ARPC5O15511 151 aa6.41□□□□□ -1.38
SSBP3-209ENST00000448572 NTF3P20783 257 aa6.41□□□□□ -1.38
SSBP3-209ENST00000448572 GNG4P50150 75 aa6.41□□□□□ -1.38
SSBP3-209ENST00000448572 SYCNQ0VAF6 134 aa6.41□□□□□ -1.38
SSBP3-209ENST00000448572 CCL25O15444 150 aa6.4□□□□□ -1.38
SSBP3-209ENST00000448572 MT-ND6P03923 174 aa6.4□□□□□ -1.38
SSBP3-209ENST00000448572 FGF6P10767 208 aa6.4□□□□□ -1.38
SSBP3-209ENST00000448572 XCL1P47992 114 aa6.4□□□□□ -1.38
SSBP3-209ENST00000448572 TWIST1Q15672 202 aa6.4□□□□□ -1.38
SSBP3-209ENST00000448572 CENPWQ5EE01 88 aa6.4□□□□□ -1.38
SSBP3-209ENST00000448572 C9orf62Q8N4C0 152 aa6.4□□□□□ -1.38
SSBP3-209ENST00000448572 C11orf52Q96A22 123 aa6.4□□□□□ -1.38
SSBP3-209ENST00000448572 PDE6DO43924 150 aa6.39□□□□□ -1.39
SSBP3-209ENST00000448572 MALP21145 153 aa6.39□□□□□ -1.39
SSBP3-209ENST00000448572 PTTG1IPP53801 180 aa6.39□□□□□ -1.39
SSBP3-209ENST00000448572 CCL20P78556 96 aa6.39□□□□□ -1.39
SSBP3-209ENST00000448572 FOXI1Q12951 378 aa6.39□□□□□ -1.39
SSBP3-209ENST00000448572 ZNF345Q14585 488 aa6.39□□□□□ -1.39
SSBP3-209ENST00000448572 Q5BKY6 102 aa6.39□□□□□ -1.39
SSBP3-209ENST00000448572 LYZL1Q6UWQ5 148 aa6.39□□□□□ -1.39
SSBP3-209ENST00000448572 DIRC1Q969H9 104 aa6.39□□□□□ -1.39
SSBP3-209ENST00000448572 MRAP2Q96G30 205 aa6.39□□□□□ -1.39
SSBP3-209ENST00000448572 IGLV4-69A0A075B6H9 119 aa6.38□□□□□ -1.39
SSBP3-209ENST00000448572 A0A1B0GV50 99 aa6.38□□□□□ -1.39
SSBP3-209ENST00000448572 KANTRA0A1W2PQU2 76 aa6.38□□□□□ -1.39
SSBP3-209ENST00000448572 C19orf71A6NCJ1 209 aa6.38□□□□□ -1.39
SSBP3-209ENST00000448572 I3L3M4 83 aa6.38□□□□□ -1.39
SSBP3-209ENST00000448572 PMCHP20382 165 aa6.38□□□□□ -1.39
SSBP3-209ENST00000448572 CTRLP40313 264 aa6.38□□□□□ -1.39
SSBP3-209ENST00000448572 CAMPP49913 170 aa6.38□□□□□ -1.39
SSBP3-209ENST00000448572 CD164L2Q6UWJ8 174 aa6.38□□□□□ -1.39
SSBP3-209ENST00000448572 TNXBP22105 4242 aa6.37□□□□□ -1.39
SSBP3-209ENST00000448572 LINC00959A0A1B0GUT2 108 aa6.37□□□□□ -1.39
SSBP3-209ENST00000448572 SDHAF1A6NFY7 115 aa6.37□□□□□ -1.39
SSBP3-209ENST00000448572 C1orf196B1AJZ1 125 aa6.37□□□□□ -1.39
SSBP3-209ENST00000448572 APOMO95445 188 aa6.37□□□□□ -1.39
SSBP3-209ENST00000448572 GAGE2BQ13066 116 aa6.37□□□□□ -1.39
SSBP3-209ENST00000448572 CNFNQ9BYD5 112 aa6.37□□□□□ -1.39
SSBP3-209ENST00000448572 CYTL1Q9NRR1 136 aa6.37□□□□□ -1.39
SSBP3-209ENST00000448572 GNG13Q9P2W3 67 aa6.37□□□□□ -1.39
SSBP3-209ENST00000448572 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.36□□□□□ -1.39
SSBP3-209ENST00000448572 TRAV1-1A0A0B4J248 108 aa6.36□□□□□ -1.39
SSBP3-209ENST00000448572 IGKV2-29A2NJV5 120 aaPredicted RBP6.36□□□□□ -1.39
SSBP3-209ENST00000448572 TAGLN2P37802 199 aaKnown RBP6.36□□□□□ -1.39
SSBP3-209ENST00000448572 GATD1Q8NB37 220 aa6.36□□□□□ -1.39
SSBP3-209ENST00000448572 BORCS7Q96B45 105 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms