RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 GNRH2O43555 120 aa7.12□□□□□ -1.27
SMC6-207ENST00000448223 GNLYP22749 145 aa7.12□□□□□ -1.27
SMC6-207ENST00000448223 PIK3CD-AS1Q5SR53 167 aa7.12□□□□□ -1.27
SMC6-207ENST00000448223 FAM19A3Q7Z5A8 133 aa7.12□□□□□ -1.27
SMC6-207ENST00000448223 RITA1Q96K30 269 aa7.12□□□□□ -1.27
SMC6-207ENST00000448223 XCL1P47992 114 aa7.12□□□□□ -1.27
SMC6-207ENST00000448223 EIF4EBP1Q13541 118 aaPredicted RBP7.12□□□□□ -1.27
SMC6-207ENST00000448223 KALRNO60229 2985 aa7.12□□□□□ -1.27
SMC6-207ENST00000448223 USP9XQ93008 2570 aaPredicted RBP7.12□□□□□ -1.27
SMC6-207ENST00000448223 IGHV1-58A0A0C4DH39 117 aa7.12□□□□□ -1.27
SMC6-207ENST00000448223 TRIAP1O43715 76 aa7.12□□□□□ -1.27
SMC6-207ENST00000448223 C2orf91Q6ZV80 131 aa7.12□□□□□ -1.27
SMC6-207ENST00000448223 C5orf38Q86SI9 138 aa7.11□□□□□ -1.27
SMC6-207ENST00000448223 MDFICQ9P1T7 246 aa7.11□□□□□ -1.27
SMC6-207ENST00000448223 LENEPQ9Y5L5 61 aa7.11□□□□□ -1.27
SMC6-207ENST00000448223 ZNF883P0CG24 379 aa7.11□□□□□ -1.27
SMC6-207ENST00000448223 J3QLI3 93 aa7.11□□□□□ -1.27
SMC6-207ENST00000448223 IGHV3-30-3P0DP02 117 aa7.11□□□□□ -1.27
SMC6-207ENST00000448223 ZNF491Q8N8L2 437 aa7.11□□□□□ -1.27
SMC6-207ENST00000448223 A0A1B0GXF2 115 aa7.11□□□□□ -1.27
SMC6-207ENST00000448223 Q8N7P7 452 aa7.11□□□□□ -1.27
SMC6-207ENST00000448223 MRPL53Q96EL3 112 aaKnown RBP7.11□□□□□ -1.27
SMC6-207ENST00000448223 IGHV3-33P01772 117 aa7.1□□□□□ -1.27
SMC6-207ENST00000448223 RNASE6Q93091 150 aaKnown RBP7.1□□□□□ -1.27
SMC6-207ENST00000448223 XCL2Q9UBD3 114 aa7.1□□□□□ -1.27
SMC6-207ENST00000448223 ETDCA0A1B0GVM5 59 aa7.1□□□□□ -1.27
SMC6-207ENST00000448223 TMEM178BH3BS89 294 aa7.1□□□□□ -1.27
SMC6-207ENST00000448223 LOXP28300 417 aaPredicted RBP7.1□□□□□ -1.27
SMC6-207ENST00000448223 SPRY4Q9C004 299 aa7.1□□□□□ -1.27
SMC6-207ENST00000448223 DKK4Q9UBT3 224 aa7.1□□□□□ -1.27
SMC6-207ENST00000448223 TACC2O95359 2948 aa7.1□□□□□ -1.27
SMC6-207ENST00000448223 A0A0J9YXY3 114 aa7.1□□□□□ -1.27
SMC6-207ENST00000448223 CFHR3Q02985 330 aa7.1□□□□□ -1.27
SMC6-207ENST00000448223 FAM110DQ8TAY7 271 aaPredicted RBP7.1□□□□□ -1.27
SMC6-207ENST00000448223 KLK5Q9Y337 293 aaPredicted RBP7.1□□□□□ -1.27
SMC6-207ENST00000448223 SCXQ7RTU7 201 aa7.1□□□□□ -1.27
SMC6-207ENST00000448223 SPRY2O43597 315 aa7.09□□□□□ -1.27
SMC6-207ENST00000448223 SERTAD4-AS1Q5TG53 156 aa7.09□□□□□ -1.27
SMC6-207ENST00000448223 MIR7-3HGQ8N6C7 128 aa7.09□□□□□ -1.27
SMC6-207ENST00000448223 TET2Q6N021 2002 aaPredicted RBP7.09□□□□□ -1.27
SMC6-207ENST00000448223 GP9P14770 177 aa7.09□□□□□ -1.27
SMC6-207ENST00000448223 ZNF833PQ6ZTB9 187 aa7.09□□□□□ -1.27
SMC6-207ENST00000448223 ANGP03950 147 aaKnown RBP7.09□□□□□ -1.27
SMC6-207ENST00000448223 MIFP14174 115 aa7.09□□□□□ -1.27
SMC6-207ENST00000448223 PIP4P2Q8N4L2 257 aa7.09□□□□□ -1.27
SMC6-207ENST00000448223 MAPKAPK5-AS1Q8N8E1 139 aa7.09□□□□□ -1.27
SMC6-207ENST00000448223 FAM215AQ9Y5M1 114 aa7.09□□□□□ -1.27
SMC6-207ENST00000448223 NFE4Q86UQ8 179 aa7.09□□□□□ -1.28
SMC6-207ENST00000448223 A0A0J9YY99 117 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 TEX22C9J3V5 150 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 PSCAO43653 123 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 LINC00310P59036 64 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 IGHV1-69P01742 117 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 CLPSL2Q6UWE3 100 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 PRORYQ9H606 182 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 IGHV4OR15-8A0A075B7B6 117 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 A0A087WW49 117 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 PRR4Q16378 134 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 Q6ZQT7 251 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 SEM1Q6ZVN7 128 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 C11orf44Q8N8P7 122 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 ZFHX4Q86UP3 3567 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 POLQO75417 2590 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 CENPEQ02224 2701 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 NCR3O14931 201 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 PATE2Q6UY27 113 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 ZFYVE26Q68DK2 2539 aa7.08□□□□□ -1.28
SMC6-207ENST00000448223 A0A0G2JNJ9 132 aa7.07□□□□□ -1.28
SMC6-207ENST00000448223 IGLV1-44P01699 117 aa7.07□□□□□ -1.28
SMC6-207ENST00000448223 Q9UFV3 132 aa7.07□□□□□ -1.28
SMC6-207ENST00000448223 IGKV4-1P06312 121 aa7.07□□□□□ -1.28
SMC6-207ENST00000448223 GDF5OSQ5U4N7 250 aa7.07□□□□□ -1.28
SMC6-207ENST00000448223 ABCA2Q9BZC7 2435 aa7.07□□□□□ -1.28
SMC6-207ENST00000448223 MYO18BQ8IUG5 2567 aa7.07□□□□□ -1.28
SMC6-207ENST00000448223 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.07□□□□□ -1.28
SMC6-207ENST00000448223 C19orf71A6NCJ1 209 aa7.07□□□□□ -1.28
SMC6-207ENST00000448223 Q6JHZ5 121 aa7.07□□□□□ -1.28
SMC6-207ENST00000448223 DIRC1Q969H9 104 aa7.07□□□□□ -1.28
SMC6-207ENST00000448223 FAM167A-AS1Q96KT0 104 aa7.07□□□□□ -1.28
SMC6-207ENST00000448223 CCL19Q99731 98 aa7.07□□□□□ -1.28
SMC6-207ENST00000448223 TRAV7A0A075B6U4 112 aa7.06□□□□□ -1.28
SMC6-207ENST00000448223 SIRPDQ9H106 197 aa7.06□□□□□ -1.28
SMC6-207ENST00000448223 LRCOL1A6NCL2 159 aa7.06□□□□□ -1.28
SMC6-207ENST00000448223 NDUFA4O00483 81 aa7.06□□□□□ -1.28
SMC6-207ENST00000448223 TNRC6BQ9UPQ9 1833 aaKnown RBP7.06□□□□□ -1.28
SMC6-207ENST00000448223 ATP6V0E1O15342 81 aa7.05□□□□□ -1.28
SMC6-207ENST00000448223 GATA3P23771 443 aa7.05□□□□□ -1.28
SMC6-207ENST00000448223 TIRAPP58753 221 aa7.05□□□□□ -1.28
SMC6-207ENST00000448223 LINC00322Q6ZN03 302 aaPredicted RBP7.05□□□□□ -1.28
SMC6-207ENST00000448223 MBD3L4A6NDZ8 208 aaPredicted RBP7.05□□□□□ -1.28
SMC6-207ENST00000448223 MBD3L3A6NE82 208 aaPredicted RBP7.05□□□□□ -1.28
SMC6-207ENST00000448223 MBD3L5A6NJ08 208 aaPredicted RBP7.05□□□□□ -1.28
SMC6-207ENST00000448223 ZNF672Q499Z4 452 aaPredicted RBP7.05□□□□□ -1.28
SMC6-207ENST00000448223 CTSZQ9UBR2 303 aa7.05□□□□□ -1.28
SMC6-207ENST00000448223 LST1O00453 97 aa7.05□□□□□ -1.28
SMC6-207ENST00000448223 ZFAND3Q9H8U3 227 aa7.04□□□□□ -1.28
SMC6-207ENST00000448223 H0Y9J4 135 aa7.04□□□□□ -1.28
SMC6-207ENST00000448223 H3BUX3 64 aa7.04□□□□□ -1.28
SMC6-207ENST00000448223 RUSC1-AS1Q66K80 236 aa7.04□□□□□ -1.28
SMC6-207ENST00000448223 PSPHP1O15172 72 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms