RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 A0A1B0GUV1 79 aa11.7□□□□□ -0.54
COL9A1-205ENST00000447041 K7EN84 100 aa11.7□□□□□ -0.54
COL9A1-205ENST00000447041 RPP21Q9H633 154 aaKnown RBP11.7□□□□□ -0.54
COL9A1-205ENST00000447041 TRAV26-2A0A0B4J265 109 aa11.69□□□□□ -0.54
COL9A1-205ENST00000447041 RPL37AP61513 92 aaKnown RBP11.69□□□□□ -0.54
COL9A1-205ENST00000447041 TWIST1Q15672 202 aa11.69□□□□□ -0.54
COL9A1-205ENST00000447041 CNFNQ9BYD5 112 aa11.69□□□□□ -0.54
COL9A1-205ENST00000447041 TRAV8-4A0A0B4J246 113 aa11.68□□□□□ -0.54
COL9A1-205ENST00000447041 hDV102S1A0JD36 115 aa11.68□□□□□ -0.54
COL9A1-205ENST00000447041 UBE2L6O14933 153 aa11.68□□□□□ -0.54
COL9A1-205ENST00000447041 AMTP48728 403 aa11.68□□□□□ -0.54
COL9A1-205ENST00000447041 COTL1Q14019 142 aa11.68□□□□□ -0.54
COL9A1-205ENST00000447041 WDR73Q6P4I2 378 aa11.68□□□□□ -0.54
COL9A1-205ENST00000447041 GATD1Q8NB37 220 aa11.68□□□□□ -0.54
COL9A1-205ENST00000447041 CLRN3Q8NCR9 226 aa11.68□□□□□ -0.54
COL9A1-205ENST00000447041 TAGLN2P37802 199 aaKnown RBP11.67□□□□□ -0.54
COL9A1-205ENST00000447041 HNRNPA3P51991 378 aaKnown RBP11.67□□□□□ -0.54
COL9A1-205ENST00000447041 SDIM1Q6ZPB5 146 aa11.67□□□□□ -0.54
COL9A1-205ENST00000447041 OCC1Q8TAD7 63 aa11.67□□□□□ -0.54
COL9A1-205ENST00000447041 CNBPP62633 177 aaKnown RBP11.66□□□□□ -0.54
COL9A1-205ENST00000447041 GTSF1Q8WW33 167 aa11.66□□□□□ -0.54
COL9A1-205ENST00000447041 RPL39LQ96EH5 51 aaKnown RBP11.65□□□□□ -0.54
COL9A1-205ENST00000447041 OXTP01178 125 aa11.64□□□□□ -0.55
COL9A1-205ENST00000447041 SLPIP03973 132 aa11.64□□□□□ -0.55
COL9A1-205ENST00000447041 FOXA3P55318 350 aaPredicted RBP11.64□□□□□ -0.55
COL9A1-205ENST00000447041 Q6ZNX1 250 aa11.64□□□□□ -0.55
COL9A1-205ENST00000447041 IGKV3OR2-268A0A0C4DH90 116 aa11.63□□□□□ -0.55
COL9A1-205ENST00000447041 HMCN2Q8NDA2 5059 aa11.62□□□□□ -0.55
COL9A1-205ENST00000447041 CIRBPQ14011 172 aaKnown RBP11.62□□□□□ -0.55
COL9A1-205ENST00000447041 ALKAL2Q6UX46 152 aa11.62□□□□□ -0.55
COL9A1-205ENST00000447041 C15orf56Q8N910 161 aa11.62□□□□□ -0.55
COL9A1-205ENST00000447041 AP5S1Q9NUS5 200 aa11.62□□□□□ -0.55
COL9A1-205ENST00000447041 IGHV3-64A0A075B6Q5 118 aa11.61□□□□□ -0.55
COL9A1-205ENST00000447041 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.61□□□□□ -0.55
COL9A1-205ENST00000447041 IGKV2-29A2NJV5 120 aaPredicted RBP11.61□□□□□ -0.55
COL9A1-205ENST00000447041 GAGE12HA6NDE8 117 aa11.61□□□□□ -0.55
COL9A1-205ENST00000447041 CHTF8P0CG12 524 aa11.61□□□□□ -0.55
COL9A1-205ENST00000447041 GATCO43716 136 aaKnown RBP11.6□□□□□ -0.55
COL9A1-205ENST00000447041 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.59□□□□□ -0.55
COL9A1-205ENST00000447041 TMEM250H0YL14 139 aa11.59□□□□□ -0.55
COL9A1-205ENST00000447041 APCSP02743 223 aa11.59□□□□□ -0.55
COL9A1-205ENST00000447041 AMMECR1LQ6DCA0 310 aa11.59□□□□□ -0.55
COL9A1-205ENST00000447041 FAM231DQ6ZW35 169 aa11.59□□□□□ -0.55
COL9A1-205ENST00000447041 SMIM15Q7Z3B0 74 aa11.59□□□□□ -0.55
COL9A1-205ENST00000447041 SDHAF1A6NFY7 115 aa11.58□□□□□ -0.56
COL9A1-205ENST00000447041 NCR2O95944 276 aa11.58□□□□□ -0.56
COL9A1-205ENST00000447041 CEBPGP53567 150 aa11.58□□□□□ -0.56
COL9A1-205ENST00000447041 HIGD2BQ4VC39 106 aa11.58□□□□□ -0.56
COL9A1-205ENST00000447041 RNASEKQ6P5S7 137 aaKnown RBP11.58□□□□□ -0.56
COL9A1-205ENST00000447041 AKAP14Q86UN6 197 aa11.58□□□□□ -0.56
COL9A1-205ENST00000447041 SPACA4Q8TDM5 124 aa11.58□□□□□ -0.56
COL9A1-205ENST00000447041 FGF6P10767 208 aa11.57□□□□□ -0.56
COL9A1-205ENST00000447041 BLOC1S1P78537 153 aa11.57□□□□□ -0.56
COL9A1-205ENST00000447041 SERTAD4-AS1Q5TG53 156 aa11.57□□□□□ -0.56
COL9A1-205ENST00000447041 LYPD6BQ8NI32 183 aa11.57□□□□□ -0.56
COL9A1-205ENST00000447041 CHCHD10Q8WYQ3 142 aaPredicted RBP11.57□□□□□ -0.56
COL9A1-205ENST00000447041 hCG_2014768A0A024R1R8 64 aa11.56□□□□□ -0.56
COL9A1-205ENST00000447041 A0A087WYN8 130 aa11.56□□□□□ -0.56
COL9A1-205ENST00000447041 A8MWL6 223 aa11.56□□□□□ -0.56
COL9A1-205ENST00000447041 GAS8-AS1O95177 125 aa11.56□□□□□ -0.56
COL9A1-205ENST00000447041 TEX261Q6UWH6 196 aa11.56□□□□□ -0.56
COL9A1-205ENST00000447041 H7C423 109 aa11.55□□□□□ -0.56
COL9A1-205ENST00000447041 CT83Q5H943 113 aa11.55□□□□□ -0.56
COL9A1-205ENST00000447041 CFAP161Q6P656 301 aa11.55□□□□□ -0.56
COL9A1-205ENST00000447041 DPH3Q96FX2 82 aa11.55□□□□□ -0.56
COL9A1-205ENST00000447041 FAM231BA6NCW3 169 aa11.54□□□□□ -0.56
COL9A1-205ENST00000447041 RNF185Q96GF1 192 aa11.54□□□□□ -0.56
COL9A1-205ENST00000447041 TRBV6-5A0A0K0K1A5 114 aa11.53□□□□□ -0.56
COL9A1-205ENST00000447041 I3L3M4 83 aa11.53□□□□□ -0.56
COL9A1-205ENST00000447041 PMCHP20382 165 aa11.53□□□□□ -0.56
COL9A1-205ENST00000447041 COX6A2Q02221 97 aa11.53□□□□□ -0.56
COL9A1-205ENST00000447041 TSHBP01222 138 aa11.52□□□□□ -0.57
COL9A1-205ENST00000447041 RPS10P46783 165 aaKnown RBP11.52□□□□□ -0.57
COL9A1-205ENST00000447041 FOXI1Q12951 378 aa11.52□□□□□ -0.57
COL9A1-205ENST00000447041 LINC01551Q86U37 167 aa11.52□□□□□ -0.57
COL9A1-205ENST00000447041 OR5A1Q8NGJ0 315 aa11.52□□□□□ -0.57
COL9A1-205ENST00000447041 BORCS7Q96B45 105 aa11.52□□□□□ -0.57
COL9A1-205ENST00000447041 SMIM7Q9BQ49 75 aa11.52□□□□□ -0.57
COL9A1-205ENST00000447041 TMEM242Q9NWH2 141 aa11.52□□□□□ -0.57
COL9A1-205ENST00000447041 GVQW2A0A096LPI5 108 aaPredicted RBP11.51□□□□□ -0.57
COL9A1-205ENST00000447041 HIGD1CA8MV81 97 aa11.51□□□□□ -0.57
COL9A1-205ENST00000447041 ESDP10768 282 aa11.51□□□□□ -0.57
COL9A1-205ENST00000447041 ZNF25P17030 456 aaPredicted RBP11.51□□□□□ -0.57
COL9A1-205ENST00000447041 PRSS3P2Q8NHM4 247 aa11.51□□□□□ -0.57
COL9A1-205ENST00000447041 TSKUQ8WUA8 353 aa11.51□□□□□ -0.57
COL9A1-205ENST00000447041 EIF5A2Q9GZV4 153 aaKnown RBP11.51□□□□□ -0.57
COL9A1-205ENST00000447041 ST20Q9HBF5 79 aa11.51□□□□□ -0.57
COL9A1-205ENST00000447041 PLAC8Q9NZF1 115 aa11.51□□□□□ -0.57
COL9A1-205ENST00000447041 IGKV2-24A0A0C4DH68 120 aa11.5□□□□□ -0.57
COL9A1-205ENST00000447041 A0A1B0GUT8 65 aa11.5□□□□□ -0.57
COL9A1-205ENST00000447041 NDUFS6O75380 124 aaKnown RBP11.5□□□□□ -0.57
COL9A1-205ENST00000447041 XCL1P47992 114 aa11.5□□□□□ -0.57
COL9A1-205ENST00000447041 BTF3L4Q96K17 158 aa11.5□□□□□ -0.57
COL9A1-205ENST00000447041 TMEM191AQ9H0A3 160 aa11.5□□□□□ -0.57
COL9A1-205ENST00000447041 PHOX2AO14813 284 aa11.49□□□□□ -0.57
COL9A1-205ENST00000447041 MT1HL1P0DM35 61 aa11.49□□□□□ -0.57
COL9A1-205ENST00000447041 MAJINQ3KP22 176 aa11.49□□□□□ -0.57
COL9A1-205ENST00000447041 MRAP2Q96G30 205 aa11.49□□□□□ -0.57
COL9A1-205ENST00000447041 TMEM101Q96IK0 257 aa11.49□□□□□ -0.57
COL9A1-205ENST00000447041 FAM210AQ96ND0 272 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms