RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 TSPAN13O95857 204 aa12.29□□□□□ -0.44
LAPTM4B-201ENST00000445593 MAPKAPK5-AS1Q8N8E1 139 aa12.29□□□□□ -0.44
LAPTM4B-201ENST00000445593 VCYO14598 125 aa12.28□□□□□ -0.44
LAPTM4B-201ENST00000445593 RPL35AP18077 110 aaKnown RBP12.28□□□□□ -0.44
LAPTM4B-201ENST00000445593 POLR2KP53803 58 aaKnown RBP12.28□□□□□ -0.44
LAPTM4B-201ENST00000445593 GAGE5Q13069 117 aa12.28□□□□□ -0.44
LAPTM4B-201ENST00000445593 GAGE6Q13070 117 aa12.28□□□□□ -0.44
LAPTM4B-201ENST00000445593 ZMAT4Q9H898 229 aa12.28□□□□□ -0.44
LAPTM4B-201ENST00000445593 IGHV3-38A0A0C4DH36 116 aa12.28□□□□□ -0.44
LAPTM4B-201ENST00000445593 OR11H12B2RN74 326 aa12.28□□□□□ -0.44
LAPTM4B-201ENST00000445593 F8VRH5 84 aa12.28□□□□□ -0.44
LAPTM4B-201ENST00000445593 H7C1H1 209 aa12.28□□□□□ -0.44
LAPTM4B-201ENST00000445593 PPDPFQ9H3Y8 114 aa12.28□□□□□ -0.44
LAPTM4B-201ENST00000445593 A0A1B0GWB2 263 aa12.27□□□□□ -0.44
LAPTM4B-201ENST00000445593 PPP1R17O96001 155 aa12.27□□□□□ -0.44
LAPTM4B-201ENST00000445593 IGHV3-53P01767 116 aa12.27□□□□□ -0.44
LAPTM4B-201ENST00000445593 TEP1Q99973 2627 aaKnown RBP12.27□□□□□ -0.45
LAPTM4B-201ENST00000445593 RNASE1P07998 156 aaKnown RBP12.27□□□□□ -0.45
LAPTM4B-201ENST00000445593 RNASE13Q5GAN3 156 aaKnown RBP12.27□□□□□ -0.45
LAPTM4B-201ENST00000445593 Q6ZSN1 163 aa12.27□□□□□ -0.45
LAPTM4B-201ENST00000445593 NEXN-AS1Q8NBZ9 246 aa12.27□□□□□ -0.45
LAPTM4B-201ENST00000445593 TSHBP01222 138 aa12.26□□□□□ -0.45
LAPTM4B-201ENST00000445593 PHLDA1Q8WV24 401 aaPredicted RBP12.26□□□□□ -0.45
LAPTM4B-201ENST00000445593 LY6G6DO95868 133 aa12.26□□□□□ -0.45
LAPTM4B-201ENST00000445593 INSP01308 110 aa12.26□□□□□ -0.45
LAPTM4B-201ENST00000445593 H3BRM9 83 aa12.25□□□□□ -0.45
LAPTM4B-201ENST00000445593 CEMP1Q6PRD7 247 aaPredicted RBP12.25□□□□□ -0.45
LAPTM4B-201ENST00000445593 OR5A1Q8NGJ0 315 aa12.25□□□□□ -0.45
LAPTM4B-201ENST00000445593 FHL3Q13643 280 aa12.25□□□□□ -0.45
LAPTM4B-201ENST00000445593 NHP2Q9NX24 153 aaKnown RBP12.25□□□□□ -0.45
LAPTM4B-201ENST00000445593 TRBV25-1A0A075B6N4 114 aa12.24□□□□□ -0.45
LAPTM4B-201ENST00000445593 CCDC179H3BU77 68 aa12.24□□□□□ -0.45
LAPTM4B-201ENST00000445593 SPANXB1Q9NS25 103 aaPredicted RBP12.24□□□□□ -0.45
LAPTM4B-201ENST00000445593 INAFM1C9JVW0 142 aa12.24□□□□□ -0.45
LAPTM4B-201ENST00000445593 PLNP26678 52 aa12.24□□□□□ -0.45
LAPTM4B-201ENST00000445593 SEC11AP67812 179 aa12.24□□□□□ -0.45
LAPTM4B-201ENST00000445593 ZNF415Q09FC8 603 aa12.24□□□□□ -0.45
LAPTM4B-201ENST00000445593 TRPT1Q86TN4 253 aaKnown RBP12.24□□□□□ -0.45
LAPTM4B-201ENST00000445593 POM121L12Q8N7R1 296 aa12.24□□□□□ -0.45
LAPTM4B-201ENST00000445593 CHAC1Q9BUX1 264 aa12.24□□□□□ -0.45
LAPTM4B-201ENST00000445593 IGHV3-64A0A075B6Q5 118 aa12.24□□□□□ -0.45
LAPTM4B-201ENST00000445593 FAM110AQ9BQ89 295 aa12.24□□□□□ -0.45
LAPTM4B-201ENST00000445593 MRPL23Q16540 153 aaKnown RBP12.23□□□□□ -0.45
LAPTM4B-201ENST00000445593 TRGV1A0A0A0MS02 117 aa12.23□□□□□ -0.45
LAPTM4B-201ENST00000445593 M0R2P5 195 aa12.23□□□□□ -0.45
LAPTM4B-201ENST00000445593 XGP55808 180 aa12.23□□□□□ -0.45
LAPTM4B-201ENST00000445593 HILS1P60008 231 aa12.23□□□□□ -0.45
LAPTM4B-201ENST00000445593 TMEM170BQ5T4T1 132 aa12.23□□□□□ -0.45
LAPTM4B-201ENST00000445593 F8P00451 2351 aa12.23□□□□□ -0.45
LAPTM4B-201ENST00000445593 C11orf86A6NJI1 115 aa12.22□□□□□ -0.45
LAPTM4B-201ENST00000445593 TRBV27A0A0K0K1C4 114 aa12.22□□□□□ -0.45
LAPTM4B-201ENST00000445593 FXYD2P54710 66 aa12.22□□□□□ -0.45
LAPTM4B-201ENST00000445593 OR11H2Q8NH07 326 aa12.22□□□□□ -0.45
LAPTM4B-201ENST00000445593 TNFRSF18Q9Y5U5 241 aa12.22□□□□□ -0.45
LAPTM4B-201ENST00000445593 ERG28Q9UKR5 140 aa12.22□□□□□ -0.45
LAPTM4B-201ENST00000445593 IGIPA6NJ69 53 aa12.21□□□□□ -0.46
LAPTM4B-201ENST00000445593 C1orf158Q8N1D5 194 aa12.21□□□□□ -0.46
LAPTM4B-201ENST00000445593 PTH2Q96A98 100 aa12.21□□□□□ -0.46
LAPTM4B-201ENST00000445593 PRADC1Q9BSG0 188 aa12.21□□□□□ -0.46
LAPTM4B-201ENST00000445593 APOMO95445 188 aa12.2□□□□□ -0.46
LAPTM4B-201ENST00000445593 TRAV12-1A0A0B4J245 112 aa12.2□□□□□ -0.46
LAPTM4B-201ENST00000445593 CFAP126Q5VTH2 177 aa12.2□□□□□ -0.46
LAPTM4B-201ENST00000445593 C11orf72Q8NBR9 251 aa12.2□□□□□ -0.46
LAPTM4B-201ENST00000445593 SPATA25Q9BR10 227 aa12.2□□□□□ -0.46
LAPTM4B-201ENST00000445593 I3L3M4 83 aa12.19□□□□□ -0.46
LAPTM4B-201ENST00000445593 KRTAP10-3P60369 221 aa12.19□□□□□ -0.46
LAPTM4B-201ENST00000445593 SMIM13P0DJ93 91 aa12.19□□□□□ -0.46
LAPTM4B-201ENST00000445593 TRRAPQ9Y4A5 3859 aa12.19□□□□□ -0.46
LAPTM4B-201ENST00000445593 TRAV2A0A0B4J234 112 aa12.18□□□□□ -0.46
LAPTM4B-201ENST00000445593 PF4P02776 101 aa12.18□□□□□ -0.46
LAPTM4B-201ENST00000445593 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.18□□□□□ -0.46
LAPTM4B-201ENST00000445593 TRBV6-5A0A0K0K1A5 114 aa12.18□□□□□ -0.46
LAPTM4B-201ENST00000445593 IGKV2-29A2NJV5 120 aaPredicted RBP12.18□□□□□ -0.46
LAPTM4B-201ENST00000445593 PMVKQ15126 192 aa12.18□□□□□ -0.46
LAPTM4B-201ENST00000445593 Q6ZTI0 123 aa12.18□□□□□ -0.46
LAPTM4B-201ENST00000445593 IGLV4-69A0A075B6H9 119 aa12.17□□□□□ -0.46
LAPTM4B-201ENST00000445593 ADARB2-AS1A8MUL3 147 aa12.17□□□□□ -0.46
LAPTM4B-201ENST00000445593 SCGB1D4Q6XE38 83 aa12.17□□□□□ -0.46
LAPTM4B-201ENST00000445593 ZNRF2Q8NHG8 242 aa12.17□□□□□ -0.46
LAPTM4B-201ENST00000445593 SPATA3Q8NHX4 192 aa12.17□□□□□ -0.46
LAPTM4B-201ENST00000445593 HIST1H4GQ99525 98 aa12.17□□□□□ -0.46
LAPTM4B-201ENST00000445593 A8MWV9 139 aa12.17□□□□□ -0.46
LAPTM4B-201ENST00000445593 SRSF9Q13242 221 aaKnown RBP eCLIP12.17□□□□□ -0.46
LAPTM4B-201ENST00000445593 NOP10Q9NPE3 64 aaKnown RBP12.17□□□□□ -0.46
LAPTM4B-201ENST00000445593 ZNF815PA8K554 130 aa12.16□□□□□ -0.46
LAPTM4B-201ENST00000445593 A8MTW9 85 aa12.16□□□□□ -0.46
LAPTM4B-201ENST00000445593 C20orf203Q8NBC4 194 aa12.16□□□□□ -0.46
LAPTM4B-201ENST00000445593 PLEKHB2Q96CS7 222 aa12.16□□□□□ -0.46
LAPTM4B-201ENST00000445593 C16orf95Q9H693 158 aa12.16□□□□□ -0.46
LAPTM4B-201ENST00000445593 Q6ZUT4 128 aa12.15□□□□□ -0.46
LAPTM4B-201ENST00000445593 GAGE13Q4V321 117 aa12.15□□□□□ -0.46
LAPTM4B-201ENST00000445593 TRAV25A0A0B4J276 109 aa12.14□□□□□ -0.47
LAPTM4B-201ENST00000445593 A0A0J9YXV3 536 aa12.14□□□□□ -0.47
LAPTM4B-201ENST00000445593 A4D1N5 150 aa12.14□□□□□ -0.47
LAPTM4B-201ENST00000445593 MYMXA0A1B0GTQ4 84 aa12.14□□□□□ -0.47
LAPTM4B-201ENST00000445593 VCX2Q9H322 139 aa12.13□□□□□ -0.47
LAPTM4B-201ENST00000445593 TIMM17AQ99595 171 aa12.13□□□□□ -0.47
LAPTM4B-201ENST00000445593 TM2D2Q9BX73 214 aa12.13□□□□□ -0.47
LAPTM4B-201ENST00000445593 GAGE7O76087 117 aa12.12□□□□□ -0.47
LAPTM4B-201ENST00000445593 IGLV1-51P01701 117 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms